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CBS51388_009803-T1, CBS51388_009803-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009803-T1
Unique NameCBS51388_009803-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:39101..40322-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009803-T1 ID=CBS51388_009803-T1|Name=CBS51388_009803-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1222bp|location=Sequence derived from alignment at An16:39101..40322- (Aspergillus niger CBS 513.88)
ATGACTGTCCAACAACCACGACTTGAAATCAATGGCTCAGACGAGGAGAA
TACCATGAAAAACGTGAAGACCATATTGGTTACTGGAGGCGCCGGTTTTA
TGTGAGTCTATTACTGTGGCTATGGTTATTGGAGTTTCAAAGACACAGAT
AGGTAAACTAACACTGCTTGGTCAGTGGAGGCTGGTTCGTTCGACACCTC
CTTCAGGTATACGGAACGAAATATACGGTACTCTGTTTTGATATCCTCGA
TTACTGCGCATCTAAGCGCAACTTTCAACCCGTTGAACATTTGCCTAACT
TCCACTTCTTTCCGGGGGATCTGTGCGACCGCGACAGAGTGACTGCTCTC
TTCCAGCAGTTCAAAGTGGATGCAGTTGTCCACTTCGCGGCCAATTCTCA
TGTGGATCAATCTCTAGTTAACCCGCTCTCTTTCACTCGGAGCAACGTCA
CAGGGACCCATGTCCTTCTGGAAGCAGCACGCCAAGCTGGGACAGTAATA
AGGTTTATCCACATCTCTACTGACGAGGTATACGGAGGAAACATGCCAGG
CCAGGACTATGCCTTTACCGAGGAAGATCAGCTGAACCCCACCAATCCGT
ATTCTGCTAGCAAAGCCGCTGCTGAGATGATCGCCAATTCCTACCGTTAT
TCCTTTCACATGCCCATCATAATAACCCGCTGCAATAATGTTTTCGGTCC
CTGTCAGTACCCTGAAAGTGAGAGCTCCCTGATGCTGATTTAACGGGCTG
CTGTTCCCTGACATACCTTGTGCTAGAACTCATTCCAAAGTTCGCGATGC
AAATGCTACGTTCCCAACGAATGACTTTACATGGTCAGGGAGAGGCAGTT
CGTGGTTTTGTCTACGTCAGTGATGCCATGAGCGCTTTCGATATCATTCT
TCATCGAGGCCTTGTGTCTGAGACATACAATATATCCTCGAAAGAGCAGA
TAAAGGTCGTAGACGTTGCGAAACGAATTATTCAGTGGTTTCATGCAGTC
CAGAGCGATACCTGCGAACAATATCTGGAGACAGTCGCAGATAGACCCTT
CAACGACCGGATGTACTGGACCAATGATTCCAAGCTTCGACAATTAGGAT
GGACGGAGAAAGTGTCCTTCGATGAGGGACTTATAATGACACTAGAATGG
TATCGTGACCATGGCGAAACATTCTGGTCTGGACCAGGGCCAGCGTGTAA
ATTGAACGGGAGGCAGGGTTGA
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Coding sequence (CDS) from alignment at An16:39101..40322-

>CBS51388_009803-T1 ID=CBS51388_009803-T1|Name=CBS51388_009803-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3267bp|location=Sequence derived from alignment at An16:39101..40322- (Aspergillus niger CBS 513.88)
AACTCATTCCAAAGTTCGCGATGCAAATGCTACGTTCCCAACGAATGACT
TTACATGGTCAGGGAGAGGCAGTTCGTGGTTTTGTCTACGTCAGTGATGC
CATGAGCGCTTTCGATATCATTCTTCATCGAGGCCTTGTGTCTGAGACAT
ACAATATATCCTCGAAAGAGCAGATAAAGGTCGTAGACGTTGCGAAACGA
ATTATTCAGTGGTTTCATGCAGTCCAGAGCGATACCTGCGAACAATATCT
GGAGACAGTCGCAGATAGACCCTTCAACGACCGGATGTACTGGACCAATG
ATTCCAAGCTTCGACAATTAGGATGGACGGAGAAAGTGTCCTTCGATGAG
GGACTTATAATGACACTAGAATGGTATCGTGACCATGGCGAAACATTCTG
GTCTGGACCAGGGCCAGCGTGTAAATTGAACGGGAGGCAGGGTTGATGGA
GGCTGGTTCGTTCGACACCTCCTTCAGGTATACGGAACGAAATATACGGT
ACTCTGTTTTGATATCCTCGATTACTGCGCATCTAAGCGCAACTTTCAAC
CCGTTGAACATTTGCCTAACTTCCACTTCTTTCCGGGGGATCTGTGCGAC
CGCGACAGAGTGACTGCTCTCTTCCAGCAGTTCAAAGTGGATGCAGTTGT
CCACTTCGCGGCCAATTCTCATGTGGATCAATCTCTAGTTAACCCGCTCT
CTTTCACTCGGAGCAACGTCACAGGGACCCATGTCCTTCTGGAAGCAGCA
CGCCAAGCTGGGACAGTAATAAGGTTTATCCACATCTCTACTGACGAGGT
ATACGGAGGAAACATGCCAGGCCAGGACTATGCCTTTACCGAGGAAGATC
AGCTGAACCCCACCAATCCGTATTCTGCTAGCAAAGCCGCTGCTGAGATG
ATCGCCAATTCCTACCGTTATTCCTTTCACATGCCCATCATAATAACCCG
CTGCAATAATGTTTTCGGTCCCTGTCAGTACCCTGAAAATGACTGTCCAA
CAACCACGACTTGAAATCAATGGCTCAGACGAGGAGAATACCATGAAAAA
CGTGAAGACCATATTGGTTACTGGAGGCGCCGGTTTTATAACTCATTCCA
AAGTTCGCGATGCAAATGCTACGTTCCCAACGAATGACTTTACATGGTCA
GGGAGAGGCAGTTCGTGGTTTTGTCTACGTCAGTGATGCCATGAGCGCTT
TCGATATCATTCTTCATCGAGGCCTTGTGTCTGAGACATACAATATATCC
TCGAAAGAGCAGATAAAGGTCGTAGACGTTGCGAAACGAATTATTCAGTG
GTTTCATGCAGTCCAGAGCGATACCTGCGAACAATATCTGGAGACAGTCG
CAGATAGACCCTTCAACGACCGGATGTACTGGACCAATGATTCCAAGCTT
CGACAATTAGGATGGACGGAGAAAGTGTCCTTCGATGAGGGACTTATAAT
GACACTAGAATGGTATCGTGACCATGGCGAAACATTCTGGTCTGGACCAG
GGCCAGCGTGTAAATTGAACGGGAGGCAGGGTTGATGGAGGCTGGTTCGT
TCGACACCTCCTTCAGGTATACGGAACGAAATATACGGTACTCTGTTTTG
ATATCCTCGATTACTGCGCATCTAAGCGCAACTTTCAACCCGTTGAACAT
TTGCCTAACTTCCACTTCTTTCCGGGGGATCTGTGCGACCGCGACAGAGT
GACTGCTCTCTTCCAGCAGTTCAAAGTGGATGCAGTTGTCCACTTCGCGG
CCAATTCTCATGTGGATCAATCTCTAGTTAACCCGCTCTCTTTCACTCGG
AGCAACGTCACAGGGACCCATGTCCTTCTGGAAGCAGCACGCCAAGCTGG
GACAGTAATAAGGTTTATCCACATCTCTACTGACGAGGTATACGGAGGAA
ACATGCCAGGCCAGGACTATGCCTTTACCGAGGAAGATCAGCTGAACCCC
ACCAATCCGTATTCTGCTAGCAAAGCCGCTGCTGAGATGATCGCCAATTC
CTACCGTTATTCCTTTCACATGCCCATCATAATAACCCGCTGCAATAATG
TTTTCGGTCCCTGTCAGTACCCTGAAAATGACTGTCCAACAACCACGACT
TGAAATCAATGGCTCAGACGAGGAGAATACCATGAAAAACGTGAAGACCA
TATTGGTTACTGGAGGCGCCGGTTTTATAACTCATTCCAAAGTTCGCGAT
GCAAATGCTACGTTCCCAACGAATGACTTTACATGGTCAGGGAGAGGCAG
TTCGTGGTTTTGTCTACGTCAGTGATGCCATGAGCGCTTTCGATATCATT
CTTCATCGAGGCCTTGTGTCTGAGACATACAATATATCCTCGAAAGAGCA
GATAAAGGTCGTAGACGTTGCGAAACGAATTATTCAGTGGTTTCATGCAG
TCCAGAGCGATACCTGCGAACAATATCTGGAGACAGTCGCAGATAGACCC
TTCAACGACCGGATGTACTGGACCAATGATTCCAAGCTTCGACAATTAGG
ATGGACGGAGAAAGTGTCCTTCGATGAGGGACTTATAATGACACTAGAAT
GGTATCGTGACCATGGCGAAACATTCTGGTCTGGACCAGGGCCAGCGTGT
AAATTGAACGGGAGGCAGGGTTGATGGAGGCTGGTTCGTTCGACACCTCC
TTCAGGTATACGGAACGAAATATACGGTACTCTGTTTTGATATCCTCGAT
TACTGCGCATCTAAGCGCAACTTTCAACCCGTTGAACATTTGCCTAACTT
CCACTTCTTTCCGGGGGATCTGTGCGACCGCGACAGAGTGACTGCTCTCT
TCCAGCAGTTCAAAGTGGATGCAGTTGTCCACTTCGCGGCCAATTCTCAT
GTGGATCAATCTCTAGTTAACCCGCTCTCTTTCACTCGGAGCAACGTCAC
AGGGACCCATGTCCTTCTGGAAGCAGCACGCCAAGCTGGGACAGTAATAA
GGTTTATCCACATCTCTACTGACGAGGTATACGGAGGAAACATGCCAGGC
CAGGACTATGCCTTTACCGAGGAAGATCAGCTGAACCCCACCAATCCGTA
TTCTGCTAGCAAAGCCGCTGCTGAGATGATCGCCAATTCCTACCGTTATT
CCTTTCACATGCCCATCATAATAACCCGCTGCAATAATGTTTTCGGTCCC
TGTCAGTACCCTGAAAATGACTGTCCAACAACCACGACTTGAAATCAATG
GCTCAGACGAGGAGAATACCATGAAAAACGTGAAGACCATATTGGTTACT
GGAGGCGCCGGTTTTAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009225nucleotide-sugar metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008460dTDP-glucose 4,6-dehydratase activity
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_009803CBS51388_009803Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009803-T1CBS51388_009803-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009803-T1.cdsCBS51388_009803-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009803-T1.exon3CBS51388_009803-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_009803-T1.exon2CBS51388_009803-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_009803-T1.exon1CBS51388_009803-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR005888
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR016040
DBxrefPFAM:PF04321
DBxrefPFAM:PF02719
DBxrefPFAM:PF07993
DBxrefPFAM:PF16363
DBxrefPFAM:PF01370
DBxrefPFAM:PF01073
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:39101..40322 -
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