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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:50739..52660+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009807-T1 ID=CBS51388_009807-T1|Name=CBS51388_009807-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1922bp|location=Sequence derived from alignment at An16:50739..52660+ (Aspergillus niger CBS 513.88)
ATGGACGACGGGGAGACCAGGCGCCCACGGGCAACGGTATGTTCACTCGT
ATTCTCCTTCAGCTGAGCCAGGAGCTGATCGGAGTAATCTCCTCGCTTGA
GCAGTCTGATGCGATCTCCCCCCGAGGAGAGAACCCTCCCACTTCACCTC
TATCACCTACTCGCGGCCGCCGAGGGACTGCTGGTGACGCTGACTTTGTT
TCTCCCACCCGCCGCGTCTCTGGCCGTGATGGCTCCGGGGCTGGAGTTCG
TCGACGCAGCTCCGCCGCCTCCCGTCGCAGTGGTGGAAGTGGCATCCCCA
GTTTGGCGCCACGCACCACGCTGGCTGAACGAACCCAAGGTCGTTTCACC
ATGGCTGGCCCAGAAGAGACGCCTCAGCTGCGCTTGGCCCATGAACCGTT
TGTGCAACCGGGCTATGGCGATCTAAACCCATCCTACGAACAGCCCGCCA
ACTCCAAACCTGTCTGGGGTCTGGCGAAACCGCTCCCTCGTGTCGTCCGA
CCGGGCATGGTGCCGACCAAGGAGGAGCTGTTGGAAGCCCGTCAAAATAT
TCAGCTGCCGGCAGAAAATTCACAGAAGCTAGGGCTGGAGGTCGACCCCA
ATGACCTAGAGCTGGGCCAAATCGAGAAGACGGCTGACCCTCGTAAAATG
GCGGCCCAGGTGGAAGATGCCCGCATCCAGCGTGAGAACAACTTCATGAA
CAAGATTCTGAGTGGGGATGCCACCACAACGCGACAAGGCTCGCGCCTCT
CGCGGACTTCATCGTCGCGTATCCGCCGCCCATCGGCCTGGGATCTCCCG
CCTGAGAATCTCTCGACGGTGCCCGAAGGCGAGACCCCGGCTCCCAGTGA
GACCCATGAGGAACCCCCTCAGATGAGTAGTGAGGAGCCCTTGGAGCCCG
TCCTGGAGGAGCCCGAGCTGCGCGCTGACGATGGCAAGGACGGGATGATG
GACGACCTGCCCAATCTGGAGGAGATCGAGGCCGCCTATCCGGAAGATCT
GCATCCGCTGGTACAGGAGCTGGTGGAGGAGGAGGTGCACAACAACCACA
CCACCTGGTCCGTCATCCGCACTCATCACCGCGAAGCCCTGGCCGAGTCC
CTGGGGGTCTTCGTGCAGCTGTTCGTCGGCTTTTGCGGCGATCTAGCAGT
GACCGTGGCCAACGCCGGTAATCCCAACACCACCGACTGGGTCTGGGGGT
TTGCTACCATGATGGCCATCTACGTCTCCGGTGGTGTGTCCGGTGCACAT
CTCAATCCGACCATCACCATTATGCTATGGTTTTACCGCGGTTTCCCCAA
GAGCAAGATGCCCGAGTACTTCGCCGCGCAATTCTTGGGGGCCTTCATCG
CCGCGCTCGCCGCGTACGGTCTCTACTATCACTCCATCCAACACTATCTC
CTGACCAACTCCACCACGGGCATCATCACCAGCTTTGTGACAAGTCAGCG
CGAGACCTGGATCGGTCCTGGTACTGCCTTCTTTACCGAATTCCTGGGCA
CGATGATACTGACTGTGGTGGTCCTGGCGCTGGGTGACGATCAAAACGCA
CCCCCGGGAGCGGGTATGAACTCACTCATCGTGGGTCTCATGGTGACCTG
CAACACGATGAGCTTTGCCTACCAGACGGGTGCCGCCTTGAATCCGAGTC
GGGACTTTGGGCCCCGACTGGCGTTGCTGGCTCTCGGGTACGGCTCGTCG
CTGTTCACCAATCCGTACTGGTTTTACGGACCATGGGCCGGATCACTCGC
GGGCTCCTTCCTCGGTGCCTTCCTGTACGACTTTATGATCTTCACGGGTG
GTGAGTCGCCGGTCAATTACCCCTGGGAACGGACGCAGCGGGCGATGCGC
AAGAGTCGGATGAAGTGGGGGAAGCGGTTGCATCTGTCGCACCGAGACAG
GGGAGAGAAGACTGTGCGTTGA back to topCoding sequence (CDS) from alignment at An16:50739..52660+ >CBS51388_009807-T1 ID=CBS51388_009807-T1|Name=CBS51388_009807-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3792bp|location=Sequence derived from alignment at An16:50739..52660+ (Aspergillus niger CBS 513.88)
ATGGACGACGGGGAGACCAGGCGCCCACGGGCAACGCTGAGCCAGGAGCT
GATCGGAGTAATCTCCTCGCTTGAGCAGTCTGATGCGATCTCCCCCCGAG
GAGAGAACCCTCCCACTTCACCTCTATCACCTACTCGCGGCCGCCGAGGG
ACTGCTGGTGACGCTGACTTTGTTTCTCCCACCCGCCGCGTCTCTGGCCG
TGATGGCTCCGGGGCTGGAGTTCGTCGACGCAGCTCCGCCGCCTCCCGTC
GCAGTGGTGGAAGTGGCATCCCCAGTTTGGCGCCACGCACCACGCTGGCT
GAACGAACCCAAGGTCGTTTCACCATGGCTGGCCCAGAAGAGACGCCTCA
GCTGCGCTTGGCCCATGAACCGTTTGTGCAACCGGGCTATGGCGATCTAA
ACCCATCCTACGAACAGCCCGCCAACTCCAAACCTGTCTGGGGTCTGGCG
AAACCGCTCCCTCGTGTCGTCCGACCGGGCATGGTGCCGACCAAGGAGGA
GCTGTTGGAAGCCCGTCAAAATATTCAGCTGCCGGCAGAAAATTCACAGA
AGCTAGGGCTGGAGGTCGACCCCAATGACCTAGAGCTGGGCCAAATCGAG
AAGACGGCTGACCCTCGTAAAATGGCGGCCCAGGTGGAAGATGCCCGCAT
CCAGCGTGAGAACAACTTCATGAACAAGATTCTGAGTGGGGATGCCACCA
CAACGCGACAAGGCTCGCGCCTCTCGCGGACTTCATCGTCGCGTATCCGC
CGCCCATCGGCCTGGGATCTCCCGCCTGAGAATCTCTCGACGGTGCCCGA
AGGCGAGACCCCGGCTCCCAGTGAGACCCATGAGGAACCCCCTCAGATGA
GTAGTGAGGAGCCCTTGGAGCCCGTCCTGGAGGAGCCCGAGCTGCGCGCT
GACGATGGCAAGGACGGGATGATGGACGACCTGCCCAATCTGGAGGAGAT
CGAGGCCGCCTATCCGGAAGATCTGCATCCGCTGGTACAGGAGCTGGTGG
AGGAGGAGGTGCACAACAACCACACCACCTGGTCCGTCATCCGCACTCAT
CACCGCGAAGCCCTGGCCGAGTCCCTGGGGGTCTTCGTGCAGCTGTTCGT
CGGCTTTTGCGGCGATCTAGCAGTGACCGTGGCCAACGCCGGTAATCCCA
ACACCACCGACTGGGTCTGGGGGTTTGCTACCATGATGGCCATCTACGTC
TCCGGTGGTGTGTCCGGTGCACATCTCAATCCGACCATCACCATTATGCT
ATGGTTTTACCGCGGTTTCCCCAAGAGCAAGATGCCCGAGTACTTCGCCG
CGCAATTCTTGGGGGCCTTCATCGCCGCGCTCGCCGCGTACGGTCTCTAC
TATCACTCCATCCAACACTATCTCCTGACCAACTCCACCACGGGCATCAT
CACCAGCTTTGTGACAAGTCAGCGCGAGACCTGGATCGGTCCTGGTACTG
CCTTCTTTACCGAATTCCTGGGCACGATGATACTGACTGTGGTGGTCCTG
GCGCTGGGTGACGATCAAAACGCACCCCCGGGAGCGGGTATGAACTCACT
CATCGTGGGTCTCATGGTGACCTGCAACACGATGAGCTTTGCCTACCAGA
CGGGTGCCGCCTTGAATCCGAGTCGGGACTTTGGGCCCCGACTGGCGTTG
CTGGCTCTCGGGTACGGCTCGTCGCTGTTCACCAATCCGTACTGGTTTTA
CGGACCATGGGCCGGATCACTCGCGGGCTCCTTCCTCGGTGCCTTCCTGT
ACGACTTTATGATCTTCACGGGTGGTGAGTCGCCGGTCAATTACCCCTGG
GAACGGACGCAGCGGGCGATGCGCAAGAGTCGGATGAAGTGGGGGAAGCG
GTTGCATCTGTCGCACCGAGACAGGGGAGAGAAGACTGTGCGTTGAATGG
ACGACGGGGAGACCAGGCGCCCACGGGCAACGCTGAGCCAGGAGCTGATC
GGAGTAATCTCCTCGCTTGAGCAGTCTGATGCGATCTCCCCCCGAGGAGA
GAACCCTCCCACTTCACCTCTATCACCTACTCGCGGCCGCCGAGGGACTG
CTGGTGACGCTGACTTTGTTTCTCCCACCCGCCGCGTCTCTGGCCGTGAT
GGCTCCGGGGCTGGAGTTCGTCGACGCAGCTCCGCCGCCTCCCGTCGCAG
TGGTGGAAGTGGCATCCCCAGTTTGGCGCCACGCACCACGCTGGCTGAAC
GAACCCAAGGTCGTTTCACCATGGCTGGCCCAGAAGAGACGCCTCAGCTG
CGCTTGGCCCATGAACCGTTTGTGCAACCGGGCTATGGCGATCTAAACCC
ATCCTACGAACAGCCCGCCAACTCCAAACCTGTCTGGGGTCTGGCGAAAC
CGCTCCCTCGTGTCGTCCGACCGGGCATGGTGCCGACCAAGGAGGAGCTG
TTGGAAGCCCGTCAAAATATTCAGCTGCCGGCAGAAAATTCACAGAAGCT
AGGGCTGGAGGTCGACCCCAATGACCTAGAGCTGGGCCAAATCGAGAAGA
CGGCTGACCCTCGTAAAATGGCGGCCCAGGTGGAAGATGCCCGCATCCAG
CGTGAGAACAACTTCATGAACAAGATTCTGAGTGGGGATGCCACCACAAC
GCGACAAGGCTCGCGCCTCTCGCGGACTTCATCGTCGCGTATCCGCCGCC
CATCGGCCTGGGATCTCCCGCCTGAGAATCTCTCGACGGTGCCCGAAGGC
GAGACCCCGGCTCCCAGTGAGACCCATGAGGAACCCCCTCAGATGAGTAG
TGAGGAGCCCTTGGAGCCCGTCCTGGAGGAGCCCGAGCTGCGCGCTGACG
ATGGCAAGGACGGGATGATGGACGACCTGCCCAATCTGGAGGAGATCGAG
GCCGCCTATCCGGAAGATCTGCATCCGCTGGTACAGGAGCTGGTGGAGGA
GGAGGTGCACAACAACCACACCACCTGGTCCGTCATCCGCACTCATCACC
GCGAAGCCCTGGCCGAGTCCCTGGGGGTCTTCGTGCAGCTGTTCGTCGGC
TTTTGCGGCGATCTAGCAGTGACCGTGGCCAACGCCGGTAATCCCAACAC
CACCGACTGGGTCTGGGGGTTTGCTACCATGATGGCCATCTACGTCTCCG
GTGGTGTGTCCGGTGCACATCTCAATCCGACCATCACCATTATGCTATGG
TTTTACCGCGGTTTCCCCAAGAGCAAGATGCCCGAGTACTTCGCCGCGCA
ATTCTTGGGGGCCTTCATCGCCGCGCTCGCCGCGTACGGTCTCTACTATC
ACTCCATCCAACACTATCTCCTGACCAACTCCACCACGGGCATCATCACC
AGCTTTGTGACAAGTCAGCGCGAGACCTGGATCGGTCCTGGTACTGCCTT
CTTTACCGAATTCCTGGGCACGATGATACTGACTGTGGTGGTCCTGGCGC
TGGGTGACGATCAAAACGCACCCCCGGGAGCGGGTATGAACTCACTCATC
GTGGGTCTCATGGTGACCTGCAACACGATGAGCTTTGCCTACCAGACGGG
TGCCGCCTTGAATCCGAGTCGGGACTTTGGGCCCCGACTGGCGTTGCTGG
CTCTCGGGTACGGCTCGTCGCTGTTCACCAATCCGTACTGGTTTTACGGA
CCATGGGCCGGATCACTCGCGGGCTCCTTCCTCGGTGCCTTCCTGTACGA
CTTTATGATCTTCACGGGTGGTGAGTCGCCGGTCAATTACCCCTGGGAAC
GGACGCAGCGGGCGATGCGCAAGAGTCGGATGAAGTGGGGGAAGCGGTTG
CATCTGTCGCACCGAGACAGGGGAGAGAAGACTGTGCGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0015267 | channel activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_16.1 |
| DBxref | InterPro:IPR023271 |
| DBxref | InterPro:IPR000425 |
| DBxref | PFAM:PF00230 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:50739..52660 + |
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