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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:74928..76916- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009817-T1 ID=CBS51388_009817-T1|Name=CBS51388_009817-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1989bp|location=Sequence derived from alignment at An16:74928..76916- (Aspergillus niger CBS 513.88)
ATGCCCAAGCTGGACCTTCCACAACAAAATGAGAATGAGCGGAGAGTTGA
GCTACGGAGCTCAGAAAGCGCCTATCAGACCCTGACGTGCGCTAGCAATA
GCAACGATCAGCCAGGGTGTATCAGAACCAGCCAGCGCCCACCGCAGCTG
GTCAAAGACAGCCGTGGCCATAGTCATTACATCGGGCCGTCAGCATCCCT
TGCATTCTTTGCGGATCTTCGCAGCCTTGTATCGGAGCAACAGCCTTCCT
CTTGCTTCGCTGCAGATACTCTGACGGAGTCTCTCGAAGCTCGACAAGAT
TCGAGTCGCTTGTCACCGTCAGCAGTGAGTACAGGCATGACGCCACTTGC
ACGCGATGAAGAATTATCGTTTGTCAAGGCACAGTTGCAGGAAATGCCCC
GGGATTGTCTGCTGGCAATAATACATGCCTTCTTTCACTCTGTAAATTCA
GATTTCCCACTACTGGACAGGGGATACTTCTTTAACAAGCTCGAGTCCTA
CATCTACCCCATCGGCCCCGCTGAGGGATTGGAAGATGGTTGGGTGGCCT
GTATCCATGCTGTTCTCGCCTTTGGCTGCTGGATCCTGGATGATGACGCT
AGATTCGAAGCCGATGAACTAAGCACGCTAAGGTCTCGCTGCTGGAACCT
CGCTCGAGGAGCTTTGGCCGGCTTATTGACCTCGTGTACGGTCTCCAATA
TCCAAGCCCTGTTGCTTATGGCACTCTTCCTGCACAACAACAATGATCGG
AATGCAGCGTGGACCCTAACTGGTAGTGCTGCGAGGATTGCTATTGCTTT
GGGATTGCATCGCAGCGATATCGACGAGAGCCTTCGCCTAACAGAACAAG
ACTCCAGAAGGCGAGTCTGGTCTACGCTATTTACATTTGAGCAATTTCTC
TGCTTATGTTTGGGCCGCCCAAGTGTGATCGACAGTCGGGAGGTAACCCT
GGGACCGGCTCCCGAAGTCTCTGCTACTGCCCTTCTCGGTCATCCCAGCC
ATCACCAGGTGGCAACTGACCTTCAACAACAAGTCAGTCGGCTCCGCGAT
GCGATCGCTTTCTTGCATCGGCCTGCTTCACCTGTATCATCCGCTGATAC
GCAATGTACTGATCCAATATCACTCTTGAGTAACCTTAAAACCTGGGAAG
CTGAGATACCAACTTATCTCATTATACCATCCGATATCTTGGATACGTGC
ATCACCCCCTCGACGGCAGTGCTGAAAGCGTTCGTCCCCAGATATCCACC
AGACCAACTACGGCCAACGGTTCTCCTCCATTTAACCTATAATAATCTCC
TTATTCAGCTTACACGGCCATATTTGCTTACTGTAATTTCGATGAGCCGA
AGGCAGAACCCGAAGCAGCAGTACCCTTGGACTCTACCGAGAGATAGTTT
CCAAAACGTGCAGAAGAGCGCTGAGCACCTGGCGTCTAGCTGCGTCACAG
CAGCGATGCGCATTGTTAATCTTCTCGTCCTGCTTGATTATGCCAATGGG
GTCAATGGAAAGACTGGCCTGGACCTTTTCTACGGGTACTCGGCTGGAAT
GGTTCTGCTCCTCCGTCGGCTGTGGGTCATGCCCCCGGATCTTCCGAAGT
CTTTGTGGCAGCTTGAAGGTGCAGCTCAGAAAGATGTTCAGTGCATGGTG
ACAAAGTTGCAGTCCATAATGCAAGTAAACGCGAAATGTCCGACAATGCA
GAGGTTCAATGCAGTGCTTCAAAAGTTCGACGAAGCCGTTCTGGCGAACG
GGCAACTTCGGGAACGAGGTGAAAATGAAGTCGCACCGTTGGGCTTGGCA
CAGGGGGGAGGAATTGACCATGTGCCCTCACAGCTTCGCATACCTTGCGT
CGATAGTCTTAACAGCGACCTGGATGGTACTGCTTCGGATAGCCCGAGCC
TGTGGCAAGAGTCTTTGCAGACGATCACGCAGTATAGTCTCGACTGGAGC
AACTTTGAGCAGTTCCTTGGTAGCATCAATGTGGCATAG back to topCoding sequence (CDS) from alignment at An16:74928..76916- >CBS51388_009817-T1 ID=CBS51388_009817-T1|Name=CBS51388_009817-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1989bp|location=Sequence derived from alignment at An16:74928..76916- (Aspergillus niger CBS 513.88)
ATGCCCAAGCTGGACCTTCCACAACAAAATGAGAATGAGCGGAGAGTTGA
GCTACGGAGCTCAGAAAGCGCCTATCAGACCCTGACGTGCGCTAGCAATA
GCAACGATCAGCCAGGGTGTATCAGAACCAGCCAGCGCCCACCGCAGCTG
GTCAAAGACAGCCGTGGCCATAGTCATTACATCGGGCCGTCAGCATCCCT
TGCATTCTTTGCGGATCTTCGCAGCCTTGTATCGGAGCAACAGCCTTCCT
CTTGCTTCGCTGCAGATACTCTGACGGAGTCTCTCGAAGCTCGACAAGAT
TCGAGTCGCTTGTCACCGTCAGCAGTGAGTACAGGCATGACGCCACTTGC
ACGCGATGAAGAATTATCGTTTGTCAAGGCACAGTTGCAGGAAATGCCCC
GGGATTGTCTGCTGGCAATAATACATGCCTTCTTTCACTCTGTAAATTCA
GATTTCCCACTACTGGACAGGGGATACTTCTTTAACAAGCTCGAGTCCTA
CATCTACCCCATCGGCCCCGCTGAGGGATTGGAAGATGGTTGGGTGGCCT
GTATCCATGCTGTTCTCGCCTTTGGCTGCTGGATCCTGGATGATGACGCT
AGATTCGAAGCCGATGAACTAAGCACGCTAAGGTCTCGCTGCTGGAACCT
CGCTCGAGGAGCTTTGGCCGGCTTATTGACCTCGTGTACGGTCTCCAATA
TCCAAGCCCTGTTGCTTATGGCACTCTTCCTGCACAACAACAATGATCGG
AATGCAGCGTGGACCCTAACTGGTAGTGCTGCGAGGATTGCTATTGCTTT
GGGATTGCATCGCAGCGATATCGACGAGAGCCTTCGCCTAACAGAACAAG
ACTCCAGAAGGCGAGTCTGGTCTACGCTATTTACATTTGAGCAATTTCTC
TGCTTATGTTTGGGCCGCCCAAGTGTGATCGACAGTCGGGAGGTAACCCT
GGGACCGGCTCCCGAAGTCTCTGCTACTGCCCTTCTCGGTCATCCCAGCC
ATCACCAGGTGGCAACTGACCTTCAACAACAAGTCAGTCGGCTCCGCGAT
GCGATCGCTTTCTTGCATCGGCCTGCTTCACCTGTATCATCCGCTGATAC
GCAATGTACTGATCCAATATCACTCTTGAGTAACCTTAAAACCTGGGAAG
CTGAGATACCAACTTATCTCATTATACCATCCGATATCTTGGATACGTGC
ATCACCCCCTCGACGGCAGTGCTGAAAGCGTTCGTCCCCAGATATCCACC
AGACCAACTACGGCCAACGGTTCTCCTCCATTTAACCTATAATAATCTCC
TTATTCAGCTTACACGGCCATATTTGCTTACTGTAATTTCGATGAGCCGA
AGGCAGAACCCGAAGCAGCAGTACCCTTGGACTCTACCGAGAGATAGTTT
CCAAAACGTGCAGAAGAGCGCTGAGCACCTGGCGTCTAGCTGCGTCACAG
CAGCGATGCGCATTGTTAATCTTCTCGTCCTGCTTGATTATGCCAATGGG
GTCAATGGAAAGACTGGCCTGGACCTTTTCTACGGGTACTCGGCTGGAAT
GGTTCTGCTCCTCCGTCGGCTGTGGGTCATGCCCCCGGATCTTCCGAAGT
CTTTGTGGCAGCTTGAAGGTGCAGCTCAGAAAGATGTTCAGTGCATGGTG
ACAAAGTTGCAGTCCATAATGCAAGTAAACGCGAAATGTCCGACAATGCA
GAGGTTCAATGCAGTGCTTCAAAAGTTCGACGAAGCCGTTCTGGCGAACG
GGCAACTTCGGGAACGAGGTGAAAATGAAGTCGCACCGTTGGGCTTGGCA
CAGGGGGGAGGAATTGACCATGTGCCCTCACAGCTTCGCATACCTTGCGT
CGATAGTCTTAACAGCGACCTGGATGGTACTGCTTCGGATAGCCCGAGCC
TGTGGCAAGAGTCTTTGCAGACGATCACGCAGTATAGTCTCGACTGGAGC
AACTTTGAGCAGTTCCTTGGTAGCATCAATGTGGCATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:74928..76916 - |
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