|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:251877..253863- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009883-T1 ID=CBS51388_009883-T1|Name=CBS51388_009883-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1987bp|location=Sequence derived from alignment at An16:251877..253863- (Aspergillus niger CBS 513.88)
ATGTGGCAGCATAAAGAGGAGGGGCTAACTGGGCATTTGCAGCTCCTGAA
TACCAGCACTTCTGAGCGCAAAATGTCACAGGACACTACAATCGAGACTG
CTCCCCATACTGTGGCGGATGCCTTTCTAGAGGCCCTGGCCGAGGTAGAT
TGCCCTCTATTGTCTCTGAGATCTGGTCTGACACCGACAGGCTGGCGTCG
ACTACCTCTTCACCGTTCTTGGGTCGGATCATCCCAGCATTATTGAGGCC
TATGTCCGCCGCCAAAATGACCCAGCCAGACAGTATCCCAAGATGGTACT
GTTCCAGCACGAAGTACGTTAGTTCTTTCCTGATAAGCAGCTGCCATACT
GATCCCCCCAGTTCGTGGCCATATCCGCCGCCGATGGATACGCCCGAATG
AGCCACAAGCCGGCCTGTGTGATCGCCCACGTGGACGTGGGGACTGCAGC
GCTCGGTCAAGGCCTGCACAATGCATCTAGCGGACGCGCCCCAGTCGTGA
TCTTCGCAGGTGTTGCTCCATCCACCCTGCTGGGCGAAGCCCCGGGCTCG
CGCTCCGAGCACGTCCAATGGTACCAGGACATCCGCGACCAAGCCGCCCT
CGTAGCACCCTACAGTCGCTTCAGCGCGGAAATCAAGTCGCCGCATAATG
TTGGCAGTCTAGTGCATCGCGCCGTCCTAATGGCTACCACTGGCTCCCCG
GGCCCAGTATATCTTACAGCCACTCGAGAGATCCTCGCCACACCGCTGCC
GAGCCCACAGGCCCGCCTCAAGCCTATCCCCTCCTGTCAGCTGGGCTCTC
TATCCCCACAAGCAGTGGAACTCATCGGAAGCGCACTGCTCAATGCGAAG
TCTCCCCTAGTAGTGACCGGGTATTTGGGCAGAAACCACAGCGCCGTTCA
GGAGCTGATCAAGCTAGCCGACACTATTCACGGCCTGCGGGTATTCGACT
CCGAGCTTCGCGAAGTATGCTTCCCAGCTACCCATCCAGCTTGCGTAACG
CGAGGAACTGGTGCCGCACCGGCTGTCCAATCTGCAGACGTGATCCTCGT
CCTCGACGCCGACGTCCCCTGGATTCCCCGCCGCATCCATCCCTCCCCTG
ACGCAGTCATCTACCACATCGACCTCGACCCGCGCAAAGAGCGCATGAAC
ATGTTCGACATTGGCGCAGCGGCCACCTTTCACGCCGATACGGGGCCAGC
ACTAACGCAGATCAACGCACACATTACCTCTTCGGCCCGTCTCGCCGATC
TCCAGACCAACTGGACTGATCGACACGAGGCCCTGCGCGCAGCTCACGCC
GAAGGTCGCGCTCGCATCGACGCCCGAGCAACTAAACTCCTCGAGACCCC
GGATGCACCCTGCAGCGTGGACTTCCTCTGCAGCCGCATCCGCGAGCTTG
TACCAGACGACACCATCTTCGTCACCGACTCCGTCACCAACCAAGTCGCC
ATGACCGAGCAGTTGCAATTGACCCGCCCAGGCTCCCACCTAACCAAAGG
AGGCAGCGGTCTCGGCTGGGCTGGAGGCGCCTCGATCGGCGTGAAATTGG
CCACGACACGGTACGATACTTCGGATCGTCCAGATGTGCGCGTCAAAGCG
GACACCAACTCACCTTTCATCTGTAACATTACCGGTGACGGCAGCTTTAT
CTTCTCCGTTCCGTCGGCAGTATACTGGGCTAGCCATAGGTATGGGTGTC
CATTCCTGACTGTGATTTTGAACAATGGTGGATGGAATGCGACTCGGCAG
TGCTTGGTGGATGTGCATCCTGGTGGTGAGGCGGCGAGATTGTCGAGTAA
AGATTTGGGCATTTCGTTGGTGGAGGATGGGCCGGATTATGGGGGGATTG
CGAAGGCAGCGGCGAATGGGAATTTGTGGGCGACGAGAGTGAGGAGTGTA
AAGGAGTTGGACGAGGCGTTGAGGGAAGGGGTTCGGGTTGTGCTGGAGGA
GGGGAGAGGGGCCGTGGTGGATGTAGTGATACAGTGA back to topCoding sequence (CDS) from alignment at An16:251877..253863- >CBS51388_009883-T1 ID=CBS51388_009883-T1|Name=CBS51388_009883-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5679bp|location=Sequence derived from alignment at An16:251877..253863- (Aspergillus niger CBS 513.88)
TTCGTGGCCATATCCGCCGCCGATGGATACGCCCGAATGAGCCACAAGCC
GGCCTGTGTGATCGCCCACGTGGACGTGGGGACTGCAGCGCTCGGTCAAG
GCCTGCACAATGCATCTAGCGGACGCGCCCCAGTCGTGATCTTCGCAGGT
GTTGCTCCATCCACCCTGCTGGGCGAAGCCCCGGGCTCGCGCTCCGAGCA
CGTCCAATGGTACCAGGACATCCGCGACCAAGCCGCCCTCGTAGCACCCT
ACAGTCGCTTCAGCGCGGAAATCAAGTCGCCGCATAATGTTGGCAGTCTA
GTGCATCGCGCCGTCCTAATGGCTACCACTGGCTCCCCGGGCCCAGTATA
TCTTACAGCCACTCGAGAGATCCTCGCCACACCGCTGCCGAGCCCACAGG
CCCGCCTCAAGCCTATCCCCTCCTGTCAGCTGGGCTCTCTATCCCCACAA
GCAGTGGAACTCATCGGAAGCGCACTGCTCAATGCGAAGTCTCCCCTAGT
AGTGACCGGGTATTTGGGCAGAAACCACAGCGCCGTTCAGGAGCTGATCA
AGCTAGCCGACACTATTCACGGCCTGCGGGTATTCGACTCCGAGCTTCGC
GAAGTATGCTTCCCAGCTACCCATCCAGCTTGCGTAACGCGAGGAACTGG
TGCCGCACCGGCTGTCCAATCTGCAGACGTGATCCTCGTCCTCGACGCCG
ACGTCCCCTGGATTCCCCGCCGCATCCATCCCTCCCCTGACGCAGTCATC
TACCACATCGACCTCGACCCGCGCAAAGAGCGCATGAACATGTTCGACAT
TGGCGCAGCGGCCACCTTTCACGCCGATACGGGGCCAGCACTAACGCAGA
TCAACGCACACATTACCTCTTCGGCCCGTCTCGCCGATCTCCAGACCAAC
TGGACTGATCGACACGAGGCCCTGCGCGCAGCTCACGCCGAAGGTCGCGC
TCGCATCGACGCCCGAGCAACTAAACTCCTCGAGACCCCGGATGCACCCT
GCAGCGTGGACTTCCTCTGCAGCCGCATCCGCGAGCTTGTACCAGACGAC
ACCATCTTCGTCACCGACTCCGTCACCAACCAAGTCGCCATGACCGAGCA
GTTGCAATTGACCCGCCCAGGCTCCCACCTAACCAAAGGAGGCAGCGGTC
TCGGCTGGGCTGGAGGCGCCTCGATCGGCGTGAAATTGGCCACGACACGG
TACGATACTTCGGATCGTCCAGATGTGCGCGTCAAAGCGGACACCAACTC
ACCTTTCATCTGTAACATTACCGGTGACGGCAGCTTTATCTTCTCCGTTC
CGTCGGCAGTATACTGGGCTAGCCATAGGTATGGGTGTCCATTCCTGACT
GTGATTTTGAACAATGGTGGATGGAATGCGACTCGGCAGTGCTTGGTGGA
TGTGCATCCTGGTGGTGAGGCGGCGAGATTGTCGAGTAAAGATTTGGGCA
TTTCGTTGGTGGAGGATGGGCCGGATTATGGGGGGATTGCGAAGGCAGCG
GCGAATGGGAATTTGTGGGCGACGAGAGTGAGGAGTGTAAAGGAGTTGGA
CGAGGCGTTGAGGGAAGGGGTTCGGGTTGTGCTGGAGGAGGGGAGAGGGG
CCGTGGTGGATGTAGTGATACAGTGAGCTGGCGTCGACTACCTCTTCACC
GTTCTTGGGTCGGATCATCCCAGCATTATTGAGGCCTATGTCCGCCGCCA
AAATGACCCAGCCAGACAGTATCCCAAGATGGTACTGTTCCAGCACGAAA
TGTGGCAGCATAAAGAGGAGGGGCTAACTGGGCATTTGCAGCTCCTGAAT
ACCAGCACTTCTGAGCGCAAAATGTCACAGGACACTACAATCGAGACTGC
TCCCCATACTGTGGCGGATGCCTTTCTAGAGGCCCTGGCCGAGTTCGTGG
CCATATCCGCCGCCGATGGATACGCCCGAATGAGCCACAAGCCGGCCTGT
GTGATCGCCCACGTGGACGTGGGGACTGCAGCGCTCGGTCAAGGCCTGCA
CAATGCATCTAGCGGACGCGCCCCAGTCGTGATCTTCGCAGGTGTTGCTC
CATCCACCCTGCTGGGCGAAGCCCCGGGCTCGCGCTCCGAGCACGTCCAA
TGGTACCAGGACATCCGCGACCAAGCCGCCCTCGTAGCACCCTACAGTCG
CTTCAGCGCGGAAATCAAGTCGCCGCATAATGTTGGCAGTCTAGTGCATC
GCGCCGTCCTAATGGCTACCACTGGCTCCCCGGGCCCAGTATATCTTACA
GCCACTCGAGAGATCCTCGCCACACCGCTGCCGAGCCCACAGGCCCGCCT
CAAGCCTATCCCCTCCTGTCAGCTGGGCTCTCTATCCCCACAAGCAGTGG
AACTCATCGGAAGCGCACTGCTCAATGCGAAGTCTCCCCTAGTAGTGACC
GGGTATTTGGGCAGAAACCACAGCGCCGTTCAGGAGCTGATCAAGCTAGC
CGACACTATTCACGGCCTGCGGGTATTCGACTCCGAGCTTCGCGAAGTAT
GCTTCCCAGCTACCCATCCAGCTTGCGTAACGCGAGGAACTGGTGCCGCA
CCGGCTGTCCAATCTGCAGACGTGATCCTCGTCCTCGACGCCGACGTCCC
CTGGATTCCCCGCCGCATCCATCCCTCCCCTGACGCAGTCATCTACCACA
TCGACCTCGACCCGCGCAAAGAGCGCATGAACATGTTCGACATTGGCGCA
GCGGCCACCTTTCACGCCGATACGGGGCCAGCACTAACGCAGATCAACGC
ACACATTACCTCTTCGGCCCGTCTCGCCGATCTCCAGACCAACTGGACTG
ATCGACACGAGGCCCTGCGCGCAGCTCACGCCGAAGGTCGCGCTCGCATC
GACGCCCGAGCAACTAAACTCCTCGAGACCCCGGATGCACCCTGCAGCGT
GGACTTCCTCTGCAGCCGCATCCGCGAGCTTGTACCAGACGACACCATCT
TCGTCACCGACTCCGTCACCAACCAAGTCGCCATGACCGAGCAGTTGCAA
TTGACCCGCCCAGGCTCCCACCTAACCAAAGGAGGCAGCGGTCTCGGCTG
GGCTGGAGGCGCCTCGATCGGCGTGAAATTGGCCACGACACGGTACGATA
CTTCGGATCGTCCAGATGTGCGCGTCAAAGCGGACACCAACTCACCTTTC
ATCTGTAACATTACCGGTGACGGCAGCTTTATCTTCTCCGTTCCGTCGGC
AGTATACTGGGCTAGCCATAGGTATGGGTGTCCATTCCTGACTGTGATTT
TGAACAATGGTGGATGGAATGCGACTCGGCAGTGCTTGGTGGATGTGCAT
CCTGGTGGTGAGGCGGCGAGATTGTCGAGTAAAGATTTGGGCATTTCGTT
GGTGGAGGATGGGCCGGATTATGGGGGGATTGCGAAGGCAGCGGCGAATG
GGAATTTGTGGGCGACGAGAGTGAGGAGTGTAAAGGAGTTGGACGAGGCG
TTGAGGGAAGGGGTTCGGGTTGTGCTGGAGGAGGGGAGAGGGGCCGTGGT
GGATGTAGTGATACAGTGAGCTGGCGTCGACTACCTCTTCACCGTTCTTG
GGTCGGATCATCCCAGCATTATTGAGGCCTATGTCCGCCGCCAAAATGAC
CCAGCCAGACAGTATCCCAAGATGGTACTGTTCCAGCACGAAATGTGGCA
GCATAAAGAGGAGGGGCTAACTGGGCATTTGCAGCTCCTGAATACCAGCA
CTTCTGAGCGCAAAATGTCACAGGACACTACAATCGAGACTGCTCCCCAT
ACTGTGGCGGATGCCTTTCTAGAGGCCCTGGCCGAGTTCGTGGCCATATC
CGCCGCCGATGGATACGCCCGAATGAGCCACAAGCCGGCCTGTGTGATCG
CCCACGTGGACGTGGGGACTGCAGCGCTCGGTCAAGGCCTGCACAATGCA
TCTAGCGGACGCGCCCCAGTCGTGATCTTCGCAGGTGTTGCTCCATCCAC
CCTGCTGGGCGAAGCCCCGGGCTCGCGCTCCGAGCACGTCCAATGGTACC
AGGACATCCGCGACCAAGCCGCCCTCGTAGCACCCTACAGTCGCTTCAGC
GCGGAAATCAAGTCGCCGCATAATGTTGGCAGTCTAGTGCATCGCGCCGT
CCTAATGGCTACCACTGGCTCCCCGGGCCCAGTATATCTTACAGCCACTC
GAGAGATCCTCGCCACACCGCTGCCGAGCCCACAGGCCCGCCTCAAGCCT
ATCCCCTCCTGTCAGCTGGGCTCTCTATCCCCACAAGCAGTGGAACTCAT
CGGAAGCGCACTGCTCAATGCGAAGTCTCCCCTAGTAGTGACCGGGTATT
TGGGCAGAAACCACAGCGCCGTTCAGGAGCTGATCAAGCTAGCCGACACT
ATTCACGGCCTGCGGGTATTCGACTCCGAGCTTCGCGAAGTATGCTTCCC
AGCTACCCATCCAGCTTGCGTAACGCGAGGAACTGGTGCCGCACCGGCTG
TCCAATCTGCAGACGTGATCCTCGTCCTCGACGCCGACGTCCCCTGGATT
CCCCGCCGCATCCATCCCTCCCCTGACGCAGTCATCTACCACATCGACCT
CGACCCGCGCAAAGAGCGCATGAACATGTTCGACATTGGCGCAGCGGCCA
CCTTTCACGCCGATACGGGGCCAGCACTAACGCAGATCAACGCACACATT
ACCTCTTCGGCCCGTCTCGCCGATCTCCAGACCAACTGGACTGATCGACA
CGAGGCCCTGCGCGCAGCTCACGCCGAAGGTCGCGCTCGCATCGACGCCC
GAGCAACTAAACTCCTCGAGACCCCGGATGCACCCTGCAGCGTGGACTTC
CTCTGCAGCCGCATCCGCGAGCTTGTACCAGACGACACCATCTTCGTCAC
CGACTCCGTCACCAACCAAGTCGCCATGACCGAGCAGTTGCAATTGACCC
GCCCAGGCTCCCACCTAACCAAAGGAGGCAGCGGTCTCGGCTGGGCTGGA
GGCGCCTCGATCGGCGTGAAATTGGCCACGACACGGTACGATACTTCGGA
TCGTCCAGATGTGCGCGTCAAAGCGGACACCAACTCACCTTTCATCTGTA
ACATTACCGGTGACGGCAGCTTTATCTTCTCCGTTCCGTCGGCAGTATAC
TGGGCTAGCCATAGGTATGGGTGTCCATTCCTGACTGTGATTTTGAACAA
TGGTGGATGGAATGCGACTCGGCAGTGCTTGGTGGATGTGCATCCTGGTG
GTGAGGCGGCGAGATTGTCGAGTAAAGATTTGGGCATTTCGTTGGTGGAG
GATGGGCCGGATTATGGGGGGATTGCGAAGGCAGCGGCGAATGGGAATTT
GTGGGCGACGAGAGTGAGGAGTGTAAAGGAGTTGGACGAGGCGTTGAGGG
AAGGGGTTCGGGTTGTGCTGGAGGAGGGGAGAGGGGCCGTGGTGGATGTA
GTGATACAGTGAGCTGGCGTCGACTACCTCTTCACCGTTCTTGGGTCGGA
TCATCCCAGCATTATTGAGGCCTATGTCCGCCGCCAAAATGACCCAGCCA
GACAGTATCCCAAGATGGTACTGTTCCAGCACGAAATGTGGCAGCATAAA
GAGGAGGGGCTAACTGGGCATTTGCAGCTCCTGAATACCAGCACTTCTGA
GCGCAAAATGTCACAGGACACTACAATCGAGACTGCTCCCCATACTGTGG
CGGATGCCTTTCTAGAGGCCCTGGCCGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000287 | magnesium ion binding |
| GO:0003824 | catalytic activity |
| GO:0030976 | thiamine pyrophosphate binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029035 |
| DBxref | InterPro:IPR029061 |
| DBxref | InterPro:IPR012000 |
| DBxref | InterPro:IPR011766 |
| DBxref | InterPro:IPR012001 |
| DBxref | PFAM:PF02776 |
| DBxref | PFAM:PF00205 |
| DBxref | PFAM:PF02775 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:251877..253863 - |
|
