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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:388890..389744- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009931-T1 ID=CBS51388_009931-T1|Name=CBS51388_009931-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=855bp|location=Sequence derived from alignment at An16:388890..389744- (Aspergillus niger CBS 513.88)
ATGCCTGGTGGAAAGGGAAAGTCTATCGGTGGAAAGGCCGGCTCCAAGGA
CTCTGCGGGGAAGAGCCAGAAGTCCCACAGCGCAAAGGCTGGTCTGCAGG
TCCGTATTAGTCGTTCTTTTTTTCTCCTCCTGGCAGGCATATGACGCTTG
ACCCATCTCATGGGTTCTGGCGGCGACATGCCGCTGAAGCCGTTACGGCC
TGGGATTTTGCTTTTTGCCTCCTTTGCCCCTCGCGATCGCCTCTATGTTG
CCAAAAGCACGCGTATAGCTCTTTTATATTGAATAATACCCCTTTAAGAG
CTATACCGCACCGGCTAGTCACAGTTCAGGCGACAGGGTTGCGAGGGGTG
GCGGTCATGATCCCTCCCGTATTTACCTTCAAAGCTTCACTTCACACATT
CATGCCTATCTATTATCATCAGTTTCATTCGCTAACATTATCCTTCGATC
ACAGTTCCCTTGCGGTCGTGTTAAGCGCTTTTTGAAGAACAACACCCAGA
ACAAGATGCGCGTTGGCGCCAAAGGTACGACCCTTTCCATTAAGCCTACA
GAAGGCGCACCTTCCTTTGTCTCCTCTTTCAACCATGCTGACAAATCCCG
ATCGCAGCCGCCGTGTATGTCACCGCTGTTCTCGAATATCTGACCGCAGA
AGTTCTCGAATTGGCCGGAAACGCTGCCAAGGATCTCAAAGTCAAGCGTA
TCACCCCGCGTCATCTGCAGCTCGCCATCCGTGGAGATGAGGAGCTGGAT
ACCCTGATCCGCGCCACTATTGCCTTCGGAGGTGTTCTGCCGCGCATCAA
CCGCGCGCTCTTGCTGAAGGTGGAGCAAAAGAAGAAGAACAAGACTGAGG
CTTAA back to topCoding sequence (CDS) from alignment at An16:388890..389744- >CBS51388_009931-T1 ID=CBS51388_009931-T1|Name=CBS51388_009931-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1251bp|location=Sequence derived from alignment at An16:388890..389744- (Aspergillus niger CBS 513.88)
CCGCCGTGTATGTCACCGCTGTTCTCGAATATCTGACCGCAGAAGTTCTC
GAATTGGCCGGAAACGCTGCCAAGGATCTCAAAGTCAAGCGTATCACCCC
GCGTCATCTGCAGCTCGCCATCCGTGGAGATGAGGAGCTGGATACCCTGA
TCCGCGCCACTATTGCCTTCGGAGGTGTTCTGCCGCGCATCAACCGCGCG
CTCTTGCTGAAGGTGGAGCAAAAGAAGAAGAACAAGACTGAGGCTTAATT
CCCTTGCGGTCGTGTTAAGCGCTTTTTGAAGAACAACACCCAGAACAAGA
TGCGCGTTGGCGCCAAAGATGCCTGGTGGAAAGGGAAAGTCTATCGGTGG
AAAGGCCGGCTCCAAGGACTCTGCGGGGAAGAGCCAGAAGTCCCACAGCG
CAAAGGCTGGTCTGCAGCCGCCGTGTATGTCACCGCTGTTCTCGAATATC
TGACCGCAGAAGTTCTCGAATTGGCCGGAAACGCTGCCAAGGATCTCAAA
GTCAAGCGTATCACCCCGCGTCATCTGCAGCTCGCCATCCGTGGAGATGA
GGAGCTGGATACCCTGATCCGCGCCACTATTGCCTTCGGAGGTGTTCTGC
CGCGCATCAACCGCGCGCTCTTGCTGAAGGTGGAGCAAAAGAAGAAGAAC
AAGACTGAGGCTTAATTCCCTTGCGGTCGTGTTAAGCGCTTTTTGAAGAA
CAACACCCAGAACAAGATGCGCGTTGGCGCCAAAGATGCCTGGTGGAAAG
GGAAAGTCTATCGGTGGAAAGGCCGGCTCCAAGGACTCTGCGGGGAAGAG
CCAGAAGTCCCACAGCGCAAAGGCTGGTCTGCAGCCGCCGTGTATGTCAC
CGCTGTTCTCGAATATCTGACCGCAGAAGTTCTCGAATTGGCCGGAAACG
CTGCCAAGGATCTCAAAGTCAAGCGTATCACCCCGCGTCATCTGCAGCTC
GCCATCCGTGGAGATGAGGAGCTGGATACCCTGATCCGCGCCACTATTGC
CTTCGGAGGTGTTCTGCCGCGCATCAACCGCGCGCTCTTGCTGAAGGTGG
AGCAAAAGAAGAAGAACAAGACTGAGGCTTAATTCCCTTGCGGTCGTGTT
AAGCGCTTTTTGAAGAACAACACCCAGAACAAGATGCGCGTTGGCGCCAA
AGATGCCTGGTGGAAAGGGAAAGTCTATCGGTGGAAAGGCCGGCTCCAAG
GACTCTGCGGGGAAGAGCCAGAAGTCCCACAGCGCAAAGGCTGGTCTGCA
G back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000786 | nucleosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046982 | protein heterodimerization activity |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009072 |
| DBxref | InterPro:IPR007125 |
| DBxref | InterPro:IPR032454 |
| DBxref | InterPro:IPR002119 |
| DBxref | PFAM:PF16211 |
| DBxref | PFAM:PF00125 |
| DBxref | PFAM:PF00808 |
| Product | histone H2A.Z |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:388890..389744 - |
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