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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:390713..391438+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009932-T1 ID=CBS51388_009932-T1|Name=CBS51388_009932-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=726bp|location=Sequence derived from alignment at An16:390713..391438+ (Aspergillus niger CBS 513.88)
ATGGTGTCTCCTCAAGTGTAAGTCAATCCTGCGTTATTCCTGCGCGTGAC
ATGCACAACCGTGGTCTGCTGTCTCGTGATGCTACTCGAGGAATAAAAAC
TGATTTGTCGTCTGTCTTGCAGTACCAACCTGGCCATCATCGTGGTGATG
ATGCAGCTAGCGAAGAAGGTTCCCTTCGAGGACCCCGATGTCCTTATGCT
TGTCCGTGGCATGTACATCCTGTCCAACGTGATCATTCTGGGAGTGTACT
TGTACACTCAGTCGAAGATCAACAAAAAGAATGGTATGCTTCGTGTCCTT
GCTTTCTTTAAGCTACGGTCCTCTAATAATCTGTGATCAGATCTGACTAC
CCTGAAATACGTGGAGCCTTCTCCTATGGGCAGCGGCGAGGAGCCCAAGC
CCGTCACCACTACCAACATGGAGTACGACAAGGGACAGCTGCGCCAGCTG
ATGAGGAGCCAGCTGATGGGTGTGGGTATGATGGGTGTGATGCACCTGTA
CTTTAAGTACACCAACCCCCTCCTGATCCAGTCCATCATTCCTCTCAAGG
GTGCCTTCGAGTCGAACCTGGTCAAGATCCACGTCTTTGGCAAGCCTGCG
ACCGGTGACCTTCAGCGCCCCTTCAAGGCCAACAACAGCTTCCTGAACCA
GGGCCAGATCAAGAGCGACAAGGCCTCCGTTGAGAACGCTGAGAAGAACT
GGAGGGGCGGTGTCAAGGAGGAGTAA back to topCoding sequence (CDS) from alignment at An16:390713..391438+ >CBS51388_009932-T1 ID=CBS51388_009932-T1|Name=CBS51388_009932-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1692bp|location=Sequence derived from alignment at An16:390713..391438+ (Aspergillus niger CBS 513.88)
ATGGTGTCTCCTCAAGTTACCAACCTGGCCATCATCGTGGTGATGATGCA
GCTAGCGAAGAAGGTTCCCTTCGAGGACCCCGATGTCCTTATGCTTGTCC
GTGGCATGTACATCCTGTCCAACGTGATCATTCTGGGAGTGTACTTGTAC
ACTCAGTCGAAGATCAACAAAAAGAATGATCTGACTACCCTGAAATACGT
GGAGCCTTCTCCTATGGGCAGCGGCGAGGAGCCCAAGCCCGTCACCACTA
CCAACATGGAGTACGACAAGGGACAGCTGCGCCAGCTGATGAGGAGCCAG
CTGATGGGTGTGGGTATGATGGGTGTGATGCACCTGTACTTTAAGTACAC
CAACCCCCTCCTGATCCAGTCCATCATTCCTCTCAAGGGTGCCTTCGAGT
CGAACCTGGTCAAGATCCACGTCTTTGGCAAGCCTGCGACCGGTGACCTT
CAGCGCCCCTTCAAGGCCAACAACAGCTTCCTGAACCAGGGCCAGATCAA
GAGCGACAAGGCCTCCGTTGAGAACGCTGAGAAGAACTGGAGGGGCGGTG
TCAAGGAGGAGTAAATGGTGTCTCCTCAAGTTACCAACCTGGCCATCATC
GTGGTGATGATGCAGCTAGCGAAGAAGGTTCCCTTCGAGGACCCCGATGT
CCTTATGCTTGTCCGTGGCATGTACATCCTGTCCAACGTGATCATTCTGG
GAGTGTACTTGTACACTCAGTCGAAGATCAACAAAAAGAATGATCTGACT
ACCCTGAAATACGTGGAGCCTTCTCCTATGGGCAGCGGCGAGGAGCCCAA
GCCCGTCACCACTACCAACATGGAGTACGACAAGGGACAGCTGCGCCAGC
TGATGAGGAGCCAGCTGATGGGTGTGGGTATGATGGGTGTGATGCACCTG
TACTTTAAGTACACCAACCCCCTCCTGATCCAGTCCATCATTCCTCTCAA
GGGTGCCTTCGAGTCGAACCTGGTCAAGATCCACGTCTTTGGCAAGCCTG
CGACCGGTGACCTTCAGCGCCCCTTCAAGGCCAACAACAGCTTCCTGAAC
CAGGGCCAGATCAAGAGCGACAAGGCCTCCGTTGAGAACGCTGAGAAGAA
CTGGAGGGGCGGTGTCAAGGAGGAGTAAATGGTGTCTCCTCAAGTTACCA
ACCTGGCCATCATCGTGGTGATGATGCAGCTAGCGAAGAAGGTTCCCTTC
GAGGACCCCGATGTCCTTATGCTTGTCCGTGGCATGTACATCCTGTCCAA
CGTGATCATTCTGGGAGTGTACTTGTACACTCAGTCGAAGATCAACAAAA
AGAATGATCTGACTACCCTGAAATACGTGGAGCCTTCTCCTATGGGCAGC
GGCGAGGAGCCCAAGCCCGTCACCACTACCAACATGGAGTACGACAAGGG
ACAGCTGCGCCAGCTGATGAGGAGCCAGCTGATGGGTGTGGGTATGATGG
GTGTGATGCACCTGTACTTTAAGTACACCAACCCCCTCCTGATCCAGTCC
ATCATTCCTCTCAAGGGTGCCTTCGAGTCGAACCTGGTCAAGATCCACGT
CTTTGGCAAGCCTGCGACCGGTGACCTTCAGCGCCCCTTCAAGGCCAACA
ACAGCTTCCTGAACCAGGGCCAGATCAAGAGCGACAAGGCCTCCGTTGAG
AACGCTGAGAAGAACTGGAGGGGCGGTGTCAAGGAGGAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005783 | endoplasmic reticulum |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0045047 | protein targeting to ER |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012098 |
| DBxref | PFAM:PF10032 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:390713..391438 + |
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