You are here

Home

CBS51388_009938-T1, CBS51388_009938-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009938-T1
Unique NameCBS51388_009938-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:409372..410415+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009938-T1 ID=CBS51388_009938-T1|Name=CBS51388_009938-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1044bp|location=Sequence derived from alignment at An16:409372..410415+ (Aspergillus niger CBS 513.88)
ATGTTCTCTGGACGGTTTGGAGTGCTTTTGACGGCGCTCGCTGCGCTGAG
TGCTGCGGCACCGACACCACTTGATGTGCGGAGTAGGTGTGCCTGATTTG
AAGTGGCTGGATAGCACTGATGAAGGTTTTGAATAGGTGTCTCGACTTCC
ACGTTGGATGAGCTGCAATTGTTCTCGCAATGGTCTGCCGCAGCTTATTG
CTCGAACAATATCGACTCGGACGACTCTAACGTGACATGCACGGCCGACG
CCTGTCCATCAGTCGAGGAGGCGAGCACCAAGATGCTGCTGGAGTTTGAC
CTGTATGTTGCTCCAGTGAAATGGATAGAACACAGCTGATTGAATAGGAC
AAATAACTTTGGAGGCACAGCCGGTTTCCTGGCCGCGGACAACACCAACA
AGCGGCTCGTGGTCGCCTTCCGAGGCAGTAGCACCATCAAGAACTGGATT
GCTGATCTCGACTTCATCCTGCAAGATAACGATGACCTCTGTACTGGCTG
CAAGGTTCACACTGGATTCTGGAAGGCATGGGAAGCCGCTGCAGACAATC
TGACGAGCAAGATCAAGTCCGCGATGAGCACGTATTCGGGCTATACCCTC
TACTTCACCGGGCACAGCTTGGGCGGCGCATTGGCTACACTGGGAGCAAC
GGTCTTGCGAAATGACGGTTATAGCGTTGAACTGGTGAGTGCTTCAGAGG
GTGATCATTAAACAGCCGGTTCTGACAGTCAATAGTACACCTATGGATGT
CCTCGAGTCGGAAACTATGCGCTGGCCGAGCACATCACCAGCCAGGGATC
TGGAGCGAACTTCCGCGTTACACACTTGAACGACATCGTCCCCCGGTTGC
CACCCATGGACTTTGGATTCAGCCAGCCAAGTCCAGAATACTGGATCACC
AGTGGCACCGGAGCCAGTGTCACGGCGTCGGATATTGAACTCATCGAGGG
AATCAATTCGACGGCGGGGAATGCAGGCGAAGCAACGGTGGACGTTTTGG
CTCACTTGTGGTACTTTTTCGCAATTTCAGAGTGTCTGCTATAG
back to top

Coding sequence (CDS) from alignment at An16:409372..410415+

>CBS51388_009938-T1 ID=CBS51388_009938-T1|Name=CBS51388_009938-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3576bp|location=Sequence derived from alignment at An16:409372..410415+ (Aspergillus niger CBS 513.88)
ATGTTCTCTGGACGGTTTGGAGTGCTTTTGACGGCGCTCGCTGCGCTGAG
TGCTGCGGCACCGACACCACTTGATGTGCGGAGTGTCTCGACTTCCACGT
TGGATGAGCTGCAATTGTTCTCGCAATGGTCTGCCGCAGCTTATTGCTCG
AACAATATCGACTCGGACGACTCTAACGTGACATGCACGGCCGACGCCTG
TCCATCAGTCGAGGAGGCGAGCACCAAGATGCTGCTGGAGTTTGACCTGA
CAAATAACTTTGGAGGCACAGCCGGTTTCCTGGCCGCGGACAACACCAAC
AAGCGGCTCGTGGTCGCCTTCCGAGGCAGTAGCACCATCAAGAACTGGAT
TGCTGATCTCGACTTCATCCTGCAAGATAACGATGACCTCTGTACTGGCT
GCAAGGTTCACACTGGATTCTGGAAGGCATGGGAAGCCGCTGCAGACAAT
CTGACGAGCAAGATCAAGTCCGCGATGAGCACGTATTCGGGCTATACCCT
CTACTTCACCGGGCACAGCTTGGGCGGCGCATTGGCTACACTGGGAGCAA
CGGTCTTGCGAAATGACGGTTATAGCGTTGAACTGTACACCTATGGATGT
CCTCGAGTCGGAAACTATGCGCTGGCCGAGCACATCACCAGCCAGGGATC
TGGAGCGAACTTCCGCGTTACACACTTGAACGACATCGTCCCCCGGTTGC
CACCCATGGACTTTGGATTCAGCCAGCCAAGTCCAGAATACTGGATCACC
AGTGGCACCGGAGCCAGTGTCACGGCGTCGGATATTGAACTCATCGAGGG
AATCAATTCGACGGCGGGGAATGCAGGCGAAGCAACGGTGGACGTTTTGG
CTCACTTGTGGTACTTTTTCGCAATTTCAGAGTGTCTGCTATAGATGTTC
TCTGGACGGTTTGGAGTGCTTTTGACGGCGCTCGCTGCGCTGAGTGCTGC
GGCACCGACACCACTTGATGTGCGGAGTGTCTCGACTTCCACGTTGGATG
AGCTGCAATTGTTCTCGCAATGGTCTGCCGCAGCTTATTGCTCGAACAAT
ATCGACTCGGACGACTCTAACGTGACATGCACGGCCGACGCCTGTCCATC
AGTCGAGGAGGCGAGCACCAAGATGCTGCTGGAGTTTGACCTGACAAATA
ACTTTGGAGGCACAGCCGGTTTCCTGGCCGCGGACAACACCAACAAGCGG
CTCGTGGTCGCCTTCCGAGGCAGTAGCACCATCAAGAACTGGATTGCTGA
TCTCGACTTCATCCTGCAAGATAACGATGACCTCTGTACTGGCTGCAAGG
TTCACACTGGATTCTGGAAGGCATGGGAAGCCGCTGCAGACAATCTGACG
AGCAAGATCAAGTCCGCGATGAGCACGTATTCGGGCTATACCCTCTACTT
CACCGGGCACAGCTTGGGCGGCGCATTGGCTACACTGGGAGCAACGGTCT
TGCGAAATGACGGTTATAGCGTTGAACTGTACACCTATGGATGTCCTCGA
GTCGGAAACTATGCGCTGGCCGAGCACATCACCAGCCAGGGATCTGGAGC
GAACTTCCGCGTTACACACTTGAACGACATCGTCCCCCGGTTGCCACCCA
TGGACTTTGGATTCAGCCAGCCAAGTCCAGAATACTGGATCACCAGTGGC
ACCGGAGCCAGTGTCACGGCGTCGGATATTGAACTCATCGAGGGAATCAA
TTCGACGGCGGGGAATGCAGGCGAAGCAACGGTGGACGTTTTGGCTCACT
TGTGGTACTTTTTCGCAATTTCAGAGTGTCTGCTATAGATGTTCTCTGGA
CGGTTTGGAGTGCTTTTGACGGCGCTCGCTGCGCTGAGTGCTGCGGCACC
GACACCACTTGATGTGCGGAGTGTCTCGACTTCCACGTTGGATGAGCTGC
AATTGTTCTCGCAATGGTCTGCCGCAGCTTATTGCTCGAACAATATCGAC
TCGGACGACTCTAACGTGACATGCACGGCCGACGCCTGTCCATCAGTCGA
GGAGGCGAGCACCAAGATGCTGCTGGAGTTTGACCTGACAAATAACTTTG
GAGGCACAGCCGGTTTCCTGGCCGCGGACAACACCAACAAGCGGCTCGTG
GTCGCCTTCCGAGGCAGTAGCACCATCAAGAACTGGATTGCTGATCTCGA
CTTCATCCTGCAAGATAACGATGACCTCTGTACTGGCTGCAAGGTTCACA
CTGGATTCTGGAAGGCATGGGAAGCCGCTGCAGACAATCTGACGAGCAAG
ATCAAGTCCGCGATGAGCACGTATTCGGGCTATACCCTCTACTTCACCGG
GCACAGCTTGGGCGGCGCATTGGCTACACTGGGAGCAACGGTCTTGCGAA
ATGACGGTTATAGCGTTGAACTGTACACCTATGGATGTCCTCGAGTCGGA
AACTATGCGCTGGCCGAGCACATCACCAGCCAGGGATCTGGAGCGAACTT
CCGCGTTACACACTTGAACGACATCGTCCCCCGGTTGCCACCCATGGACT
TTGGATTCAGCCAGCCAAGTCCAGAATACTGGATCACCAGTGGCACCGGA
GCCAGTGTCACGGCGTCGGATATTGAACTCATCGAGGGAATCAATTCGAC
GGCGGGGAATGCAGGCGAAGCAACGGTGGACGTTTTGGCTCACTTGTGGT
ACTTTTTCGCAATTTCAGAGTGTCTGCTATAGATGTTCTCTGGACGGTTT
GGAGTGCTTTTGACGGCGCTCGCTGCGCTGAGTGCTGCGGCACCGACACC
ACTTGATGTGCGGAGTGTCTCGACTTCCACGTTGGATGAGCTGCAATTGT
TCTCGCAATGGTCTGCCGCAGCTTATTGCTCGAACAATATCGACTCGGAC
GACTCTAACGTGACATGCACGGCCGACGCCTGTCCATCAGTCGAGGAGGC
GAGCACCAAGATGCTGCTGGAGTTTGACCTGACAAATAACTTTGGAGGCA
CAGCCGGTTTCCTGGCCGCGGACAACACCAACAAGCGGCTCGTGGTCGCC
TTCCGAGGCAGTAGCACCATCAAGAACTGGATTGCTGATCTCGACTTCAT
CCTGCAAGATAACGATGACCTCTGTACTGGCTGCAAGGTTCACACTGGAT
TCTGGAAGGCATGGGAAGCCGCTGCAGACAATCTGACGAGCAAGATCAAG
TCCGCGATGAGCACGTATTCGGGCTATACCCTCTACTTCACCGGGCACAG
CTTGGGCGGCGCATTGGCTACACTGGGAGCAACGGTCTTGCGAAATGACG
GTTATAGCGTTGAACTGTACACCTATGGATGTCCTCGAGTCGGAAACTAT
GCGCTGGCCGAGCACATCACCAGCCAGGGATCTGGAGCGAACTTCCGCGT
TACACACTTGAACGACATCGTCCCCCGGTTGCCACCCATGGACTTTGGAT
TCAGCCAGCCAAGTCCAGAATACTGGATCACCAGTGGCACCGGAGCCAGT
GTCACGGCGTCGGATATTGAACTCATCGAGGGAATCAATTCGACGGCGGG
GAATGCAGGCGAAGCAACGGTGGACGTTTTGGCTCACTTGTGGTACTTTT
TCGCAATTTCAGAGTGTCTGCTATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016042lipid catabolic process
GO:0006629lipid metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_009938CBS51388_009938Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009938-T1.exon1CBS51388_009938-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_009938-T1.exon2CBS51388_009938-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_009938-T1.exon3CBS51388_009938-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_009938-T1.exon4CBS51388_009938-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009938-T1.cdsCBS51388_009938-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009938-T1CBS51388_009938-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
DBxrefInterPro:IPR005592
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR002921
DBxrefPFAM:PF01764
DBxrefPFAM:PF03893
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:409372..410415 +
Powered by Drupal