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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:410951..412102+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_009939-T1 ID=CBS51388_009939-T1|Name=CBS51388_009939-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1152bp|location=Sequence derived from alignment at An16:410951..412102+ (Aspergillus niger CBS 513.88)
ATGCTATTCTTCCGCGGCGGAGTTAACAGTCCGCGCCGGCGCAACCAAGA
AAAAGCAATCTTCTGTACCATTCTTATCATCTACGCTCTATACTTCCTCT
TCTTCGCTGGGAGCTCCGATCCCAAACGGTCCGAGACGTCTGCTGAGGAT
GCGGTGAAGGGAGGTCCGCATCGGGACTCGCGGTCGGGGAAGGCTTCCCC
GTCCGCCTCGGCTTCGCGACAGCGTCAGGCCCTGGACAAGGATATGGTGG
TGGCTAGTATGAAGGGAGATGATGTCTCATGGCTGTACACATATTTTCCC
GAGTGGCATAAAAGCATCTACGTGGCGGACGACAAGAAAGCGCCGTTGAC
GGTGGCTTTGAATAAGGGGAGGGAGTCCATGGTGTATCTGACGTGAGTCT
CCGTGTCTTGGCCTTGGCCTATCTGGGCACACTTCTCACTGCTACAGATA
TATAATTGATAATTACGACAACCTTCCCGACTCAGTCCTCTTCATCCATT
CCCAAAGATACCAATGGCACAACGACGACCCTTACTACGATGGTGTGCCC
GTTCTCCGCAATTTCCAGGTCCCGTATCTCCAGAAACAAGGGTATGTGAA
TCTGCGCTGCGCCTGGGTCCTGGGCTGCCCGGCGGAGATTCATCCCCTCA
GCGATACGCATCGCAACGATGTCCACGCAGGGGAATACTTCAAGACTGGG
TTCATGGAACTGTTCCCGGGGGCGGAGGTCCCTGAAGAAGTGGGGGTCTC
ATGTTGCGCGCAATTCGCCGTCACACGCTGGAAGATCCGCGAGCGGCCTA
AGAGTGACTATGTGCGATATAGGAAATGGTTGACTGAGACGACGTTACCT
GACGATCTCAGCGGACGGATAATGGAATACTCATGGCACAGTATGTCCCT
AAATCCCACTTCAGCGCCAAGGGCAATTGACTAACAGTAACAGTGATTTT
CGGCAAGGGCCCTGTGTACTGCCCGACAGCAGAAGAATGCTACTGCAAGG
TATTTGGACTATGCAATTTGGATTGTCCGACTGAGGGAGATTGCGCTGGT
CGCTATGTTCTCCCGCCATACTCCTCCCTTCCAAAGGGATGGCCGTATGT
CGGCTGGAAGGGTCAGAAGCAGGACCCTAGCAAGGGACTCCCGGAGGCTT
GA back to topCoding sequence (CDS) from alignment at An16:410951..412102+ >CBS51388_009939-T1 ID=CBS51388_009939-T1|Name=CBS51388_009939-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3132bp|location=Sequence derived from alignment at An16:410951..412102+ (Aspergillus niger CBS 513.88)
ATGCTATTCTTCCGCGGCGGAGTTAACAGTCCGCGCCGGCGCAACCAAGA
AAAAGCAATCTTCTGTACCATTCTTATCATCTACGCTCTATACTTCCTCT
TCTTCGCTGGGAGCTCCGATCCCAAACGGTCCGAGACGTCTGCTGAGGAT
GCGGTGAAGGGAGGTCCGCATCGGGACTCGCGGTCGGGGAAGGCTTCCCC
GTCCGCCTCGGCTTCGCGACAGCGTCAGGCCCTGGACAAGGATATGGTGG
TGGCTAGTATGAAGGGAGATGATGTCTCATGGCTGTACACATATTTTCCC
GAGTGGCATAAAAGCATCTACGTGGCGGACGACAAGAAAGCGCCGTTGAC
GGTGGCTTTGAATAAGGGGAGGGAGTCCATGGTGTATCTGACATATATAA
TTGATAATTACGACAACCTTCCCGACTCAGTCCTCTTCATCCATTCCCAA
AGATACCAATGGCACAACGACGACCCTTACTACGATGGTGTGCCCGTTCT
CCGCAATTTCCAGGTCCCGTATCTCCAGAAACAAGGGTATGTGAATCTGC
GCTGCGCCTGGGTCCTGGGCTGCCCGGCGGAGATTCATCCCCTCAGCGAT
ACGCATCGCAACGATGTCCACGCAGGGGAATACTTCAAGACTGGGTTCAT
GGAACTGTTCCCGGGGGCGGAGGTCCCTGAAGAAGTGGGGGTCTCATGTT
GCGCGCAATTCGCCGTCACACGCTGGAAGATCCGCGAGCGGCCTAAGAGT
GACTATGTGCGATATAGGAAATGGTTGACTGAGACGACGTTACCTGACGA
TCTCAGCGGACGGATAATGGAATACTCATGGCACATGATTTTCGGCAAGG
GCCCTGTGTACTGCCCGACAGCAGAAGAATGCTACTGCAAGGTATTTGGA
CTATGCAATTTGGATTGTCCGACTGAGGGAGATTGCGCTGGTCGCTATGT
TCTCCCGCCATACTCCTCCCTTCCAAAGGGATGGCCGTATGTCGGCTGGA
AGGGTCAGAAGCAGGACCCTAGCAAGGGACTCCCGGAGGCTTGAATGCTA
TTCTTCCGCGGCGGAGTTAACAGTCCGCGCCGGCGCAACCAAGAAAAAGC
AATCTTCTGTACCATTCTTATCATCTACGCTCTATACTTCCTCTTCTTCG
CTGGGAGCTCCGATCCCAAACGGTCCGAGACGTCTGCTGAGGATGCGGTG
AAGGGAGGTCCGCATCGGGACTCGCGGTCGGGGAAGGCTTCCCCGTCCGC
CTCGGCTTCGCGACAGCGTCAGGCCCTGGACAAGGATATGGTGGTGGCTA
GTATGAAGGGAGATGATGTCTCATGGCTGTACACATATTTTCCCGAGTGG
CATAAAAGCATCTACGTGGCGGACGACAAGAAAGCGCCGTTGACGGTGGC
TTTGAATAAGGGGAGGGAGTCCATGGTGTATCTGACATATATAATTGATA
ATTACGACAACCTTCCCGACTCAGTCCTCTTCATCCATTCCCAAAGATAC
CAATGGCACAACGACGACCCTTACTACGATGGTGTGCCCGTTCTCCGCAA
TTTCCAGGTCCCGTATCTCCAGAAACAAGGGTATGTGAATCTGCGCTGCG
CCTGGGTCCTGGGCTGCCCGGCGGAGATTCATCCCCTCAGCGATACGCAT
CGCAACGATGTCCACGCAGGGGAATACTTCAAGACTGGGTTCATGGAACT
GTTCCCGGGGGCGGAGGTCCCTGAAGAAGTGGGGGTCTCATGTTGCGCGC
AATTCGCCGTCACACGCTGGAAGATCCGCGAGCGGCCTAAGAGTGACTAT
GTGCGATATAGGAAATGGTTGACTGAGACGACGTTACCTGACGATCTCAG
CGGACGGATAATGGAATACTCATGGCACATGATTTTCGGCAAGGGCCCTG
TGTACTGCCCGACAGCAGAAGAATGCTACTGCAAGGTATTTGGACTATGC
AATTTGGATTGTCCGACTGAGGGAGATTGCGCTGGTCGCTATGTTCTCCC
GCCATACTCCTCCCTTCCAAAGGGATGGCCGTATGTCGGCTGGAAGGGTC
AGAAGCAGGACCCTAGCAAGGGACTCCCGGAGGCTTGAATGCTATTCTTC
CGCGGCGGAGTTAACAGTCCGCGCCGGCGCAACCAAGAAAAAGCAATCTT
CTGTACCATTCTTATCATCTACGCTCTATACTTCCTCTTCTTCGCTGGGA
GCTCCGATCCCAAACGGTCCGAGACGTCTGCTGAGGATGCGGTGAAGGGA
GGTCCGCATCGGGACTCGCGGTCGGGGAAGGCTTCCCCGTCCGCCTCGGC
TTCGCGACAGCGTCAGGCCCTGGACAAGGATATGGTGGTGGCTAGTATGA
AGGGAGATGATGTCTCATGGCTGTACACATATTTTCCCGAGTGGCATAAA
AGCATCTACGTGGCGGACGACAAGAAAGCGCCGTTGACGGTGGCTTTGAA
TAAGGGGAGGGAGTCCATGGTGTATCTGACATATATAATTGATAATTACG
ACAACCTTCCCGACTCAGTCCTCTTCATCCATTCCCAAAGATACCAATGG
CACAACGACGACCCTTACTACGATGGTGTGCCCGTTCTCCGCAATTTCCA
GGTCCCGTATCTCCAGAAACAAGGGTATGTGAATCTGCGCTGCGCCTGGG
TCCTGGGCTGCCCGGCGGAGATTCATCCCCTCAGCGATACGCATCGCAAC
GATGTCCACGCAGGGGAATACTTCAAGACTGGGTTCATGGAACTGTTCCC
GGGGGCGGAGGTCCCTGAAGAAGTGGGGGTCTCATGTTGCGCGCAATTCG
CCGTCACACGCTGGAAGATCCGCGAGCGGCCTAAGAGTGACTATGTGCGA
TATAGGAAATGGTTGACTGAGACGACGTTACCTGACGATCTCAGCGGACG
GATAATGGAATACTCATGGCACATGATTTTCGGCAAGGGCCCTGTGTACT
GCCCGACAGCAGAAGAATGCTACTGCAAGGTATTTGGACTATGCAATTTG
GATTGTCCGACTGAGGGAGATTGCGCTGGTCGCTATGTTCTCCCGCCATA
CTCCTCCCTTCCAAAGGGATGGCCGTATGTCGGCTGGAAGGGTCAGAAGC
AGGACCCTAGCAAGGGACTCCCGGAGGCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021838 |
| DBxref | PFAM:PF11913 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:410951..412102 + |
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