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CBS51388_009953-T1, CBS51388_009953-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009953-T1
Unique NameCBS51388_009953-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:455484..456567+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009953-T1 ID=CBS51388_009953-T1|Name=CBS51388_009953-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1084bp|location=Sequence derived from alignment at An16:455484..456567+ (Aspergillus niger CBS 513.88)
ATGCCTGAGGTACCCATGCCAGACTTGTCTGATGAGTCTAGTTTCTACGG
CCTGTACTCCCCTCCACCCAAACGAACCCCAGCACCAGCTAACAAACCCC
ACAGGTTCAGAAGGGGAGACTGCACGCCTCGAGGAGGAAGTGGCCAACTT
CGACACCGAGCATTATTGGAGCACCGTACACCCGTTTTCCTATAACACCA
TAAAATATAATGTCCTTGCAGCCCGAGAAACCGTGCCCTCAGCATCATCC
CCAGCCCCAGAACCAGAGGCATCAGACGCAGTCCAACCAATGGACGTATC
AACCTCCGAAATCTCGAGTGTACCCCCATCAACACCGATCCCCACCCACG
ACTTTGACGTTCCCATCTCAAGCACAGACACAACCCCAGTCAGACCCAAC
CGCCCTTCACCCAACGAACCCATCTCATCTTTTCTGGCCCGTCTACGCCC
CTCATCTACCCTCTCCACATCCCCCACGGGATCCTGGATTTACACCACAA
GTTACAGTTATGAGCAGCCACAAGCAGATCTCAAAAAGCTAGTAGCAGAC
GGGACGAAGGCACTCAAAGCCCACAAAGAAGCAATCGCCCAGGTGCGGGC
CGAACACGCTAAAAAGCCAAAGAAGAAGCAGACGCCGGCTGCGCTGACGC
GCGAACTCACCCAACATCGTAAAGACCTCGAAAACACACTCTTCAGTCTG
GCCAGGCAGACGAATGTCGTTTCAGGCAAGTGGCTGTTGTTCGTCTTACC
AGAGAAGGTCGATGAGGTGTGGGGGATAGTGGCTGAGGCTACAGCGAAAG
GGGAGTTGGGGTTCGGGGTTAAGGTTGCTACTGCTGCTGTCGCCGCCGAT
GGTGATGATGATGCGAAGAAGGCGAGGTTGATTGCTATCTATACGAAGGA
TTATGAGGACAGAGCAGATGTGGAGAGAGTATTGAGGAAGATGGCGGCGT
TGAAGCTGGTGGATTTGGATGGACGACCTGTTTATTATAAGTGTGATGCA
TATACGCATTTGGATATTAGGGGGGGTAATGAGTGGGGGTTGAGGGCAAG
TATGTACTCGAGTCGGGATTTTGGAAAGAAGTAG
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Coding sequence (CDS) from alignment at An16:455484..456567+

>CBS51388_009953-T1 ID=CBS51388_009953-T1|Name=CBS51388_009953-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2040bp|location=Sequence derived from alignment at An16:455484..456567+ (Aspergillus niger CBS 513.88)
ATGCCTGAGGTACCCATGCCAGACTTGTCTGATGAGTCTAGTTCAGAAGG
GGAGACTGCACGCCTCGAGGAGGAAGTGGCCAACTTCGACACCGAGCATT
ATTGGAGCACCGTACACCCGTTTTCCTATAACACCATAAAATATAATGTC
CTTGCAGCCCGAGAAACCGTGCCCTCAGCATCATCCCCAGCCCCAGAACC
AGAGGCATCAGACGCAGTCCAACCAATGGACGTATCAACCTCCGAAATCT
CGAGTGTACCCCCATCAACACCGATCCCCACCCACGACTTTGACGTTCCC
ATCTCAAGCACAGACACAACCCCAGTCAGACCCAACCGCCCTTCACCCAA
CGAACCCATCTCATCTTTTCTGGCCCGTCTACGCCCCTCATCTACCCTCT
CCACATCCCCCACGGGATCCTGGATTTACACCACAAGTTACAGTTATGAG
CAGCCACAAGCAGATCTCAAAAAGCTAGTAGCAGACGGGACGAAGGCACT
CAAAGCCCACAAAGAAGCAATCGCCCAGGTGCGGGCCGAACACGCTAAAA
AGCCAAAGAAGAAGCAGACGCCGGCTGCGCTGACGCGCGAACTCACCCAA
CATCGTAAAGACCTCGAAAACACACTCTTCAGTCTGGCCAGGCAGACGAA
TGTCGTTTCAGGCAAGTGGCTGTTGTTCGTCTTACCAGAGAAGGTCGATG
AGGTGTGGGGGATAGTGGCTGAGGCTACAGCGAAAGGGGAGTTGGGGTTC
GGGGTTAAGGTTGCTACTGCTGCTGTCGCCGCCGATGGTGATGATGATGC
GAAGAAGGCGAGGTTGATTGCTATCTATACGAAGGATTATGAGGACAGAG
CAGATGTGGAGAGAGTATTGAGGAAGATGGCGGCGTTGAAGCTGGTGGAT
TTGGATGGACGACCTGTTTATTATAAGTGTGATGCATATACGCATTTGGA
TATTAGGGGGGGTAATGAGTGGGGGTTGAGGGCAAGTATGTACTCGAGTC
GGGATTTTGGAAAGAAGTAGATGCCTGAGGTACCCATGCCAGACTTGTCT
GATGAGTCTAGTTCAGAAGGGGAGACTGCACGCCTCGAGGAGGAAGTGGC
CAACTTCGACACCGAGCATTATTGGAGCACCGTACACCCGTTTTCCTATA
ACACCATAAAATATAATGTCCTTGCAGCCCGAGAAACCGTGCCCTCAGCA
TCATCCCCAGCCCCAGAACCAGAGGCATCAGACGCAGTCCAACCAATGGA
CGTATCAACCTCCGAAATCTCGAGTGTACCCCCATCAACACCGATCCCCA
CCCACGACTTTGACGTTCCCATCTCAAGCACAGACACAACCCCAGTCAGA
CCCAACCGCCCTTCACCCAACGAACCCATCTCATCTTTTCTGGCCCGTCT
ACGCCCCTCATCTACCCTCTCCACATCCCCCACGGGATCCTGGATTTACA
CCACAAGTTACAGTTATGAGCAGCCACAAGCAGATCTCAAAAAGCTAGTA
GCAGACGGGACGAAGGCACTCAAAGCCCACAAAGAAGCAATCGCCCAGGT
GCGGGCCGAACACGCTAAAAAGCCAAAGAAGAAGCAGACGCCGGCTGCGC
TGACGCGCGAACTCACCCAACATCGTAAAGACCTCGAAAACACACTCTTC
AGTCTGGCCAGGCAGACGAATGTCGTTTCAGGCAAGTGGCTGTTGTTCGT
CTTACCAGAGAAGGTCGATGAGGTGTGGGGGATAGTGGCTGAGGCTACAG
CGAAAGGGGAGTTGGGGTTCGGGGTTAAGGTTGCTACTGCTGCTGTCGCC
GCCGATGGTGATGATGATGCGAAGAAGGCGAGGTTGATTGCTATCTATAC
GAAGGATTATGAGGACAGAGCAGATGTGGAGAGAGTATTGAGGAAGATGG
CGGCGTTGAAGCTGGTGGATTTGGATGGACGACCTGTTTATTATAAGTGT
GATGCATATACGCATTTGGATATTAGGGGGGGTAATGAGTGGGGGTTGAG
GGCAAGTATGTACTCGAGTCGGGATTTTGGAAAGAAGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_009953CBS51388_009953Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009953-T1.exon1CBS51388_009953-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_009953-T1.exon2CBS51388_009953-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009953-T1.cdsCBS51388_009953-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009953-T1CBS51388_009953-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR015034
DBxrefInterPro:IPR023398
DBxrefPFAM:PF08939
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:455484..456567 +
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