You are here

Home

CBS51388_009966-T1, CBS51388_009966-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_009966-T1
Unique NameCBS51388_009966-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:485284..485895+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_009966-T1 ID=CBS51388_009966-T1|Name=CBS51388_009966-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=612bp|location=Sequence derived from alignment at An16:485284..485895+ (Aspergillus niger CBS 513.88)
ATGCGCTACATCTTCACAGGCAGCGACTTCGGCTCGCTGCATACTCGCTA
TCTTCCAGCCCCCTCCAACACCAACAACTCCGACGAAGACAACGATGAAG
CTAACATGCCCATTCTTTCCCACGACGACCGCGCCCGCCACCACACAGCA
GGCGTGACGGCCATTCTGCCCCTCCCTGTGCCTATGACCGATGGGGCGCC
GTGGCTTCTCACGGGGAGTTACGATGAGTCGTTGCGGGTGTACCATGCTT
CCCGAAGGGGTGAGGTACTTGGGGAGATTGGGTTGGGGGGTGGGGTTTGG
AGGTTGCAGATTCTTTCTACTCATTCTCGTCCCGTGGATGATTCGGAGGG
GGATGTGGAGTGGACGTTCCTGGTGTTGGCGAGTTGTATGCATGCTGGTA
CGAGGGTGGTTAAGGTACGGGTTGTTCTTGGGGAGAGTGGGCAGGAGTGT
GAAATGGAGGTGGTGGCGGAGTTTACGGAGCATGAGAGTATGAATTATGC
GAGTGATGTGTGGAATTGGGGAGGGCATAAGGGAGGGGAAGGAAGGGAGT
TGAAGGTTGTGTCGAGTAGTTTCTACGATCGGAGAGTTTGTGTGTGGCGG
GTTAATGTTTGA
back to top

Coding sequence (CDS) from alignment at An16:485284..485895+

>CBS51388_009966-T1 ID=CBS51388_009966-T1|Name=CBS51388_009966-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=612bp|location=Sequence derived from alignment at An16:485284..485895+ (Aspergillus niger CBS 513.88)
ATGCGCTACATCTTCACAGGCAGCGACTTCGGCTCGCTGCATACTCGCTA
TCTTCCAGCCCCCTCCAACACCAACAACTCCGACGAAGACAACGATGAAG
CTAACATGCCCATTCTTTCCCACGACGACCGCGCCCGCCACCACACAGCA
GGCGTGACGGCCATTCTGCCCCTCCCTGTGCCTATGACCGATGGGGCGCC
GTGGCTTCTCACGGGGAGTTACGATGAGTCGTTGCGGGTGTACCATGCTT
CCCGAAGGGGTGAGGTACTTGGGGAGATTGGGTTGGGGGGTGGGGTTTGG
AGGTTGCAGATTCTTTCTACTCATTCTCGTCCCGTGGATGATTCGGAGGG
GGATGTGGAGTGGACGTTCCTGGTGTTGGCGAGTTGTATGCATGCTGGTA
CGAGGGTGGTTAAGGTACGGGTTGTTCTTGGGGAGAGTGGGCAGGAGTGT
GAAATGGAGGTGGTGGCGGAGTTTACGGAGCATGAGAGTATGAATTATGC
GAGTGATGTGTGGAATTGGGGAGGGCATAAGGGAGGGGAAGGAAGGGAGT
TGAAGGTTGTGTCGAGTAGTTTCTACGATCGGAGAGTTTGTGTGTGGCGG
GTTAATGTTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_009966CBS51388_009966Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009966-T1.exon1CBS51388_009966-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009966-T1.cdsCBS51388_009966-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_009966-T1CBS51388_009966-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR015943
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:485284..485895 +
Powered by Drupal