|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:571029..571999+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010000-T1 ID=CBS51388_010000-T1|Name=CBS51388_010000-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=971bp|location=Sequence derived from alignment at An16:571029..571999+ (Aspergillus niger CBS 513.88)
ATGCCGGGAATAACAGCGAAGCTACCCCGTACGTCTTCACTACGTGTCTC
CAATTTGAACAACTCTTTAGCAATACTGACTGTCGATATCAAGGGGTTCT
GCAACTGGTCGGGTACCACCATGTGTTGATGATAATCATCGCGGTGGCGA
TCATCCTACTATGTGAGCTGTCATTTCCGGGCCCCTTCCAAGAATGCGAC
TAACTCCGTCCCAGCGTTACTATTAGCAGGATGTTCATCGTCCTCCCCGC
AGATCCCCGACATCTTCCTAATCTCTATGTACTATGAGCGCTACAAACCA
ACGTTCAATCTCGCCCAGGTAGATCCGGGGGTGGTGACAGCAACAGCAAA
TATCGTGGGAGGAGCCGAGATGGAAGTCCGCGTGGGTTATTTCGGCATCT
GCGTGCAGCCAGACGCCGGATCCTACATCTGCAATTCGAATGCGACAGCT
TTAGCGGAGATTGTCACAGTTGACCAAGATCCGTTGAACCTGATCTGGGT
AGCATCAACGTTCAAGGATGCAGTCGTCTTCCCATATCTTCTGTACGCTC
TTATCTTCCCTCCCCAGCAAGGTGTTTTAACTGACTGTTGCAATCCAGAA
TTCTTGCCGTCATCCTCGCTTTCTTCTGCTTCGTCATTCTCGCCACCTTC
CCTGGATGGCACGACGAGCTGGACCCCAGCGGTTCCGAAATCGAAGCCAG
ACCGATCCCATCGCGGCCTGTATCCCAAGCAGCATTAGCCTTGACTTTTG
TGGCCTCGGTCTTCGTTCTTGTCTCAGTATTATGGCAGCACACCGCATCC
GTAGCCGCCAGCACAATAGTTCAGGACCTGGGCAACGGAAGTGTCAAGAG
TGGTGTGGGTACATCTGCCATGGTTCTCGGCTGGTTTGGATTCGGACTTC
TGGTGGTCGTGACGATAGGACTGCTAGTGATGATTCTGAGCGTCAAACTG
ATCCAGCAGTTGACCGACTAG back to topCoding sequence (CDS) from alignment at An16:571029..571999+ >CBS51388_010000-T1 ID=CBS51388_010000-T1|Name=CBS51388_010000-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3192bp|location=Sequence derived from alignment at An16:571029..571999+ (Aspergillus niger CBS 513.88)
ATGCCGGGAATAACAGCGAAGCTACCCCGGGTTCTGCAACTGGTCGGGTA
CCACCATGTGTTGATGATAATCATCGCGGTGGCGATCATCCTACTATCGT
TACTATTAGCAGGATGTTCATCGTCCTCCCCGCAGATCCCCGACATCTTC
CTAATCTCTATGTACTATGAGCGCTACAAACCAACGTTCAATCTCGCCCA
GGTAGATCCGGGGGTGGTGACAGCAACAGCAAATATCGTGGGAGGAGCCG
AGATGGAAGTCCGCGTGGGTTATTTCGGCATCTGCGTGCAGCCAGACGCC
GGATCCTACATCTGCAATTCGAATGCGACAGCTTTAGCGGAGATTGTCAC
AGTTGACCAAGATCCGTTGAACCTGATCTGGGTAGCATCAACGTTCAAGG
ATGCAGTCGTCTTCCCATATCTTCTAATTCTTGCCGTCATCCTCGCTTTC
TTCTGCTTCGTCATTCTCGCCACCTTCCCTGGATGGCACGACGAGCTGGA
CCCCAGCGGTTCCGAAATCGAAGCCAGACCGATCCCATCGCGGCCTGTAT
CCCAAGCAGCATTAGCCTTGACTTTTGTGGCCTCGGTCTTCGTTCTTGTC
TCAGTATTATGGCAGCACACCGCATCCGTAGCCGCCAGCACAATAGTTCA
GGACCTGGGCAACGGAAGTGTCAAGAGTGGTGTGGGTACATCTGCCATGG
TTCTCGGCTGGTTTGGATTCGGACTTCTGGTGGTCGTGACGATAGGACTG
CTAGTGATGATTCTGAGCGTCAAACTGATCCAGCAGTTGACCGACTAGAT
GCCGGGAATAACAGCGAAGCTACCCCGGGTTCTGCAACTGGTCGGGTACC
ACCATGTGTTGATGATAATCATCGCGGTGGCGATCATCCTACTATCGTTA
CTATTAGCAGGATGTTCATCGTCCTCCCCGCAGATCCCCGACATCTTCCT
AATCTCTATGTACTATGAGCGCTACAAACCAACGTTCAATCTCGCCCAGG
TAGATCCGGGGGTGGTGACAGCAACAGCAAATATCGTGGGAGGAGCCGAG
ATGGAAGTCCGCGTGGGTTATTTCGGCATCTGCGTGCAGCCAGACGCCGG
ATCCTACATCTGCAATTCGAATGCGACAGCTTTAGCGGAGATTGTCACAG
TTGACCAAGATCCGTTGAACCTGATCTGGGTAGCATCAACGTTCAAGGAT
GCAGTCGTCTTCCCATATCTTCTAATTCTTGCCGTCATCCTCGCTTTCTT
CTGCTTCGTCATTCTCGCCACCTTCCCTGGATGGCACGACGAGCTGGACC
CCAGCGGTTCCGAAATCGAAGCCAGACCGATCCCATCGCGGCCTGTATCC
CAAGCAGCATTAGCCTTGACTTTTGTGGCCTCGGTCTTCGTTCTTGTCTC
AGTATTATGGCAGCACACCGCATCCGTAGCCGCCAGCACAATAGTTCAGG
ACCTGGGCAACGGAAGTGTCAAGAGTGGTGTGGGTACATCTGCCATGGTT
CTCGGCTGGTTTGGATTCGGACTTCTGGTGGTCGTGACGATAGGACTGCT
AGTGATGATTCTGAGCGTCAAACTGATCCAGCAGTTGACCGACTAGATGC
CGGGAATAACAGCGAAGCTACCCCGGGTTCTGCAACTGGTCGGGTACCAC
CATGTGTTGATGATAATCATCGCGGTGGCGATCATCCTACTATCGTTACT
ATTAGCAGGATGTTCATCGTCCTCCCCGCAGATCCCCGACATCTTCCTAA
TCTCTATGTACTATGAGCGCTACAAACCAACGTTCAATCTCGCCCAGGTA
GATCCGGGGGTGGTGACAGCAACAGCAAATATCGTGGGAGGAGCCGAGAT
GGAAGTCCGCGTGGGTTATTTCGGCATCTGCGTGCAGCCAGACGCCGGAT
CCTACATCTGCAATTCGAATGCGACAGCTTTAGCGGAGATTGTCACAGTT
GACCAAGATCCGTTGAACCTGATCTGGGTAGCATCAACGTTCAAGGATGC
AGTCGTCTTCCCATATCTTCTAATTCTTGCCGTCATCCTCGCTTTCTTCT
GCTTCGTCATTCTCGCCACCTTCCCTGGATGGCACGACGAGCTGGACCCC
AGCGGTTCCGAAATCGAAGCCAGACCGATCCCATCGCGGCCTGTATCCCA
AGCAGCATTAGCCTTGACTTTTGTGGCCTCGGTCTTCGTTCTTGTCTCAG
TATTATGGCAGCACACCGCATCCGTAGCCGCCAGCACAATAGTTCAGGAC
CTGGGCAACGGAAGTGTCAAGAGTGGTGTGGGTACATCTGCCATGGTTCT
CGGCTGGTTTGGATTCGGACTTCTGGTGGTCGTGACGATAGGACTGCTAG
TGATGATTCTGAGCGTCAAACTGATCCAGCAGTTGACCGACTAGATGCCG
GGAATAACAGCGAAGCTACCCCGGGTTCTGCAACTGGTCGGGTACCACCA
TGTGTTGATGATAATCATCGCGGTGGCGATCATCCTACTATCGTTACTAT
TAGCAGGATGTTCATCGTCCTCCCCGCAGATCCCCGACATCTTCCTAATC
TCTATGTACTATGAGCGCTACAAACCAACGTTCAATCTCGCCCAGGTAGA
TCCGGGGGTGGTGACAGCAACAGCAAATATCGTGGGAGGAGCCGAGATGG
AAGTCCGCGTGGGTTATTTCGGCATCTGCGTGCAGCCAGACGCCGGATCC
TACATCTGCAATTCGAATGCGACAGCTTTAGCGGAGATTGTCACAGTTGA
CCAAGATCCGTTGAACCTGATCTGGGTAGCATCAACGTTCAAGGATGCAG
TCGTCTTCCCATATCTTCTAATTCTTGCCGTCATCCTCGCTTTCTTCTGC
TTCGTCATTCTCGCCACCTTCCCTGGATGGCACGACGAGCTGGACCCCAG
CGGTTCCGAAATCGAAGCCAGACCGATCCCATCGCGGCCTGTATCCCAAG
CAGCATTAGCCTTGACTTTTGTGGCCTCGGTCTTCGTTCTTGTCTCAGTA
TTATGGCAGCACACCGCATCCGTAGCCGCCAGCACAATAGTTCAGGACCT
GGGCAACGGAAGTGTCAAGAGTGGTGTGGGTACATCTGCCATGGTTCTCG
GCTGGTTTGGATTCGGACTTCTGGTGGTCGTGACGATAGGACTGCTAGTG
ATGATTCTGAGCGTCAAACTGATCCAGCAGTTGACCGACTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0032220 | plasma membrane fusion involved in cytogamy |
| GO:0000753 | cell morphogenesis involved in conjugation with cellular fusion |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR033481 |
| DBxref | InterPro:IPR016509 |
| DBxref | PFAM:PF12351 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:571029..571999 + |
|
