You are here

Home

CBS51388_010005-T1, CBS51388_010005-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010005-T1
Unique NameCBS51388_010005-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:585038..586181+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010005-T1 ID=CBS51388_010005-T1|Name=CBS51388_010005-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1144bp|location=Sequence derived from alignment at An16:585038..586181+ (Aspergillus niger CBS 513.88)
ATGTCCGATGATGTCGACCTGCAACAGGAAATCCTCCAGCGGACTCTGCA
AGAGGTAGCGCACGATGAAGGCGAGCACGACGCTAACCCGTGCGTGATCT
GTCTCGAACCCATCTCCGAAGCCGCCATCGCGGTGCCATGTCGCCATGCG
AACTTTGACTTTCTATGTTTGCTGAGCTGGCTGGAACAGCGTCGCAACTG
TCCGCTGTGTATGTACATTCCCTGTGATAGAAATCTATCCTTATCCAGCA
AATATCTGACTAGATATAGGCAAGAGTGAAATCACATCAGTGAAATACAA
CCTCGAGGACATCAACGGCCCCAAGATCTACCAACTCCCAGCAAGCACAA
GCGACACCACAAGCACCTCCTCAACCTCACACCTACCAACACCCTCACAT
CATCGCCCACCCCGCAGACCCCGCCGTCCGCGCAGCCCCCGTCCCCAACA
ACAACAACAGTCCACCGACCCGCTCCGCCGCCGCCAACACATCTACCGAC
ACCAACTCTATTCCCTCCGTGTCGGCTCCAACCGTCTTTCACAATACCGC
GAACTGACTCCGGAGCGCTTTAATCGCGAAGAAGACCTCGTCTCCCGAGC
CCGGAAATGGATCCGCCGGGAGCTGCAAGTATTCGAGTTTCTCAACCCAG
AATCAGAGGACCGACAAGGCGGAGGGGTTGCGCGCCCCGGTCAGCAGAGA
CTCGAAAACCGGCGCGGCAATAACGCAGAGTTTCTACTCGAGTATATCAT
TGCTATTCTACGAACTGTGGATATTAAGGGTAGTGCTGGGCAGGCGGAGG
AGCTGTTACGCGATTTTCTGGGCAGGGAGAATGCCCGGTTGTTTCTGCAT
GAGTTGCAGGCTTGGTTGAGGAGTCCTTATATCTCTCTTGAGGACTGGGA
TCGGAATGTCCAGTATGAGGATACCGTGGGTAGTGGTGGTAATGCTCATC
CTTCGCGGCGGGAGCGCGAGGAGAGTAGAACTGCTACGCCAGTATATAGA
GATAATAGGGGACCTCGGTTTCCTAATTCTTCTGGGCGGGTGAATAAGCC
GCCGTATCATCGGAGAGGGGGCAGGTCGTCTCGGGATGCTGTGGCTCAGG
CGAGACGGGTACAATATGCCCGGGATCGGTATGTTCCCGATTGA
back to top

Coding sequence (CDS) from alignment at An16:585038..586181+

>CBS51388_010005-T1 ID=CBS51388_010005-T1|Name=CBS51388_010005-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2166bp|location=Sequence derived from alignment at An16:585038..586181+ (Aspergillus niger CBS 513.88)
ATGTCCGATGATGTCGACCTGCAACAGGAAATCCTCCAGCGGACTCTGCA
AGAGGTAGCGCACGATGAAGGCGAGCACGACGCTAACCCGTGCGTGATCT
GTCTCGAACCCATCTCCGAAGCCGCCATCGCGGTGCCATGTCGCCATGCG
AACTTTGACTTTCTATGTTTGCTGAGCTGGCTGGAACAGCGTCGCAACTG
TCCGCTGTGCAAGAGTGAAATCACATCAGTGAAATACAACCTCGAGGACA
TCAACGGCCCCAAGATCTACCAACTCCCAGCAAGCACAAGCGACACCACA
AGCACCTCCTCAACCTCACACCTACCAACACCCTCACATCATCGCCCACC
CCGCAGACCCCGCCGTCCGCGCAGCCCCCGTCCCCAACAACAACAACAGT
CCACCGACCCGCTCCGCCGCCGCCAACACATCTACCGACACCAACTCTAT
TCCCTCCGTGTCGGCTCCAACCGTCTTTCACAATACCGCGAACTGACTCC
GGAGCGCTTTAATCGCGAAGAAGACCTCGTCTCCCGAGCCCGGAAATGGA
TCCGCCGGGAGCTGCAAGTATTCGAGTTTCTCAACCCAGAATCAGAGGAC
CGACAAGGCGGAGGGGTTGCGCGCCCCGGTCAGCAGAGACTCGAAAACCG
GCGCGGCAATAACGCAGAGTTTCTACTCGAGTATATCATTGCTATTCTAC
GAACTGTGGATATTAAGGGTAGTGCTGGGCAGGCGGAGGAGCTGTTACGC
GATTTTCTGGGCAGGGAGAATGCCCGGTTGTTTCTGCATGAGTTGCAGGC
TTGGTTGAGGAGTCCTTATATCTCTCTTGAGGACTGGGATCGGAATGTCC
AGTATGAGGATACCGTGGGTAGTGGTGGTAATGCTCATCCTTCGCGGCGG
GAGCGCGAGGAGAGTAGAACTGCTACGCCAGTATATAGAGATAATAGGGG
ACCTCGGTTTCCTAATTCTTCTGGGCGGGTGAATAAGCCGCCGTATCATC
GGAGAGGGGGCAGGTCGTCTCGGGATGCTGTGGCTCAGGCGAGACGGGTA
CAATATGCCCGGGATCGGTATGTTCCCGATTGAATGTCCGATGATGTCGA
CCTGCAACAGGAAATCCTCCAGCGGACTCTGCAAGAGGTAGCGCACGATG
AAGGCGAGCACGACGCTAACCCGTGCGTGATCTGTCTCGAACCCATCTCC
GAAGCCGCCATCGCGGTGCCATGTCGCCATGCGAACTTTGACTTTCTATG
TTTGCTGAGCTGGCTGGAACAGCGTCGCAACTGTCCGCTGTGCAAGAGTG
AAATCACATCAGTGAAATACAACCTCGAGGACATCAACGGCCCCAAGATC
TACCAACTCCCAGCAAGCACAAGCGACACCACAAGCACCTCCTCAACCTC
ACACCTACCAACACCCTCACATCATCGCCCACCCCGCAGACCCCGCCGTC
CGCGCAGCCCCCGTCCCCAACAACAACAACAGTCCACCGACCCGCTCCGC
CGCCGCCAACACATCTACCGACACCAACTCTATTCCCTCCGTGTCGGCTC
CAACCGTCTTTCACAATACCGCGAACTGACTCCGGAGCGCTTTAATCGCG
AAGAAGACCTCGTCTCCCGAGCCCGGAAATGGATCCGCCGGGAGCTGCAA
GTATTCGAGTTTCTCAACCCAGAATCAGAGGACCGACAAGGCGGAGGGGT
TGCGCGCCCCGGTCAGCAGAGACTCGAAAACCGGCGCGGCAATAACGCAG
AGTTTCTACTCGAGTATATCATTGCTATTCTACGAACTGTGGATATTAAG
GGTAGTGCTGGGCAGGCGGAGGAGCTGTTACGCGATTTTCTGGGCAGGGA
GAATGCCCGGTTGTTTCTGCATGAGTTGCAGGCTTGGTTGAGGAGTCCTT
ATATCTCTCTTGAGGACTGGGATCGGAATGTCCAGTATGAGGATACCGTG
GGTAGTGGTGGTAATGCTCATCCTTCGCGGCGGGAGCGCGAGGAGAGTAG
AACTGCTACGCCAGTATATAGAGATAATAGGGGACCTCGGTTTCCTAATT
CTTCTGGGCGGGTGAATAAGCCGCCGTATCATCGGAGAGGGGGCAGGTCG
TCTCGGGATGCTGTGGCTCAGGCGAGACGGGTACAATATGCCCGGGATCG
GTATGTTCCCGATTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010005CBS51388_010005Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010005-T1.exon1CBS51388_010005-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010005-T1.exon2CBS51388_010005-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010005-T1.cdsCBS51388_010005-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010005-T1CBS51388_010005-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR001841
DBxrefPFAM:PF13639
DBxrefPFAM:PF13920
DBxrefPFAM:PF00097
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:585038..586181 +
Powered by Drupal