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CBS51388_010009-T1, CBS51388_010009-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010009-T1
Unique NameCBS51388_010009-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:596168..597422+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010009-T1 ID=CBS51388_010009-T1|Name=CBS51388_010009-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1255bp|location=Sequence derived from alignment at An16:596168..597422+ (Aspergillus niger CBS 513.88)
ATGCTGCCATCCCTGCTTTCCGTTTTATTCTTCCTGCTCTATGCAGTGAA
CGCTGTTCCACTGGCGCCCCGGGCGAGTGCACTCGCCGGGATCGACACCA
AGTCCTTCTCTAAGACCAAAGATTATCCCCTTCCCAACCTGGGCAACATC
GTTGCTCATGACCCTAATGTCATTCAGCATGATGGCTATTTCTACTTGTA
CAAAGGTGGTGTGCACATTCCGATTCACAGAGCCCGCTCCCTCAGTGGGC
CTTGGGAACAGGTCGGGACCGTCCTGGACGACTCCAGCGTGATCCCGAAA
CAGAACCGCTCTCGTCCTTGGGCCCCTACGACCATTCAGCACGACAACCG
TTTCTACTGCTTCTACGCGATCAGCGAGAACGGCAGTCGCGACAGCGCCA
TTGGAGTCGCCTCTTCGGATACTCCCGTCGGTGGAAACTGGACGGACCAT
GGCGCTGTCGTCAACACCGGCAAGGGAGACCTGTCGGACATCTATCCTTA
CTCGGTATCCAATGCGATAGACGGCGCATTCATCACCGATCAACAGACCG
GACAGTCTCACCTGCTTTACGGGAGCTATTGGCATGGTATTTTCTCGGTG
CCATTGGCTGATGATCTCCTTTCCGTCAAAACCCCGAAGACCCCAAACGC
GACCAACCTGGCCTACATCCCAGATGCCAAGTCCAAGCCTATCGAGGGCT
CTTTCATGACTTACAAGGCGCCTTACTACTACCTGTGGTTCAGTCACGGC
AAATGTTGTCACTTTGATATTCACGCTTTTCCGCCCATGGGAGACGAGTA
CGTGCACATGATCTTCTATTCGAGAACTTGGTAGCTAACATTTACAACAG
GTACAACATCCGGGTCGGTAGATCTAAGAGTGCGACAGGTCCTTTCGTGG
ATAAGGATGGCCATGATACCCTCAAGGGCGGTGGTACCATCGTCTACGGC
TCCAACCATGGAATTGTCTATGCCCCTGGTGGAGTGGGCGTGTTGATCAA
CAATGGCAGCGAAGCCGATGTCTTGTATTACCATTATCGTACGTTTACAG
TCCACTGTTGTGGGGAAGTCAGCTAACAGAGCTTGCAGTCAACACTACGT
CTGGTTTCGCACAGGGAGTGAGTCTAGCCTTAACTATCCATTGACAGGAT
GATACTAACGCAATACAGGACGCGCACTTGGGATGGAACTATCTGCACTA
TGTAAATGGATGGCCAGTGGCTGTCGAGGGGTATGTGAATGCCAACGGCA
AATAA
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Coding sequence (CDS) from alignment at An16:596168..597422+

>CBS51388_010009-T1 ID=CBS51388_010009-T1|Name=CBS51388_010009-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4404bp|location=Sequence derived from alignment at An16:596168..597422+ (Aspergillus niger CBS 513.88)
ATGCTGCCATCCCTGCTTTCCGTTTTATTCTTCCTGCTCTATGCAGTGAA
CGCTGTTCCACTGGCGCCCCGGGCGAGTGCACTCGCCGGGATCGACACCA
AGTCCTTCTCTAAGACCAAAGATTATCCCCTTCCCAACCTGGGCAACATC
GTTGCTCATGACCCTAATGTCATTCAGCATGATGGCTATTTCTACTTGTA
CAAAGGTGGTGTGCACATTCCGATTCACAGAGCCCGCTCCCTCAGTGGGC
CTTGGGAACAGGTCGGGACCGTCCTGGACGACTCCAGCGTGATCCCGAAA
CAGAACCGCTCTCGTCCTTGGGCCCCTACGACCATTCAGCACGACAACCG
TTTCTACTGCTTCTACGCGATCAGCGAGAACGGCAGTCGCGACAGCGCCA
TTGGAGTCGCCTCTTCGGATACTCCCGTCGGTGGAAACTGGACGGACCAT
GGCGCTGTCGTCAACACCGGCAAGGGAGACCTGTCGGACATCTATCCTTA
CTCGGTATCCAATGCGATAGACGGCGCATTCATCACCGATCAACAGACCG
GACAGTCTCACCTGCTTTACGGGAGCTATTGGCATGGTATTTTCTCGGTG
CCATTGGCTGATGATCTCCTTTCCGTCAAAACCCCGAAGACCCCAAACGC
GACCAACCTGGCCTACATCCCAGATGCCAAGTCCAAGCCTATCGAGGGCT
CTTTCATGACTTACAAGGCGCCTTACTACTACCTGTGGTTCAGTCACGGC
AAATGTTGTCACTTTGATATTCACGCTTTTCCGCCCATGGGAGACGAGTA
CAACATCCGGGTCGGTAGATCTAAGAGTGCGACAGGTCCTTTCGTGGATA
AGGATGGCCATGATACCCTCAAGGGCGGTGGTACCATCGTCTACGGCTCC
AACCATGGAATTGTCTATGCCCCTGGTGGAGTGGGCGTGTTGATCAACAA
TGGCAGCGAAGCCGATGTCTTGTATTACCATTATCTCAACACTACGTCTG
GTTTCGCACAGGGAGACGCGCACTTGGGATGGAACTATCTGCACTATGTA
AATGGATGGCCAGTGGCTGTCGAGGGGTATGTGAATGCCAACGGCAAATA
AATGCTGCCATCCCTGCTTTCCGTTTTATTCTTCCTGCTCTATGCAGTGA
ACGCTGTTCCACTGGCGCCCCGGGCGAGTGCACTCGCCGGGATCGACACC
AAGTCCTTCTCTAAGACCAAAGATTATCCCCTTCCCAACCTGGGCAACAT
CGTTGCTCATGACCCTAATGTCATTCAGCATGATGGCTATTTCTACTTGT
ACAAAGGTGGTGTGCACATTCCGATTCACAGAGCCCGCTCCCTCAGTGGG
CCTTGGGAACAGGTCGGGACCGTCCTGGACGACTCCAGCGTGATCCCGAA
ACAGAACCGCTCTCGTCCTTGGGCCCCTACGACCATTCAGCACGACAACC
GTTTCTACTGCTTCTACGCGATCAGCGAGAACGGCAGTCGCGACAGCGCC
ATTGGAGTCGCCTCTTCGGATACTCCCGTCGGTGGAAACTGGACGGACCA
TGGCGCTGTCGTCAACACCGGCAAGGGAGACCTGTCGGACATCTATCCTT
ACTCGGTATCCAATGCGATAGACGGCGCATTCATCACCGATCAACAGACC
GGACAGTCTCACCTGCTTTACGGGAGCTATTGGCATGGTATTTTCTCGGT
GCCATTGGCTGATGATCTCCTTTCCGTCAAAACCCCGAAGACCCCAAACG
CGACCAACCTGGCCTACATCCCAGATGCCAAGTCCAAGCCTATCGAGGGC
TCTTTCATGACTTACAAGGCGCCTTACTACTACCTGTGGTTCAGTCACGG
CAAATGTTGTCACTTTGATATTCACGCTTTTCCGCCCATGGGAGACGAGT
ACAACATCCGGGTCGGTAGATCTAAGAGTGCGACAGGTCCTTTCGTGGAT
AAGGATGGCCATGATACCCTCAAGGGCGGTGGTACCATCGTCTACGGCTC
CAACCATGGAATTGTCTATGCCCCTGGTGGAGTGGGCGTGTTGATCAACA
ATGGCAGCGAAGCCGATGTCTTGTATTACCATTATCTCAACACTACGTCT
GGTTTCGCACAGGGAGACGCGCACTTGGGATGGAACTATCTGCACTATGT
AAATGGATGGCCAGTGGCTGTCGAGGGGTATGTGAATGCCAACGGCAAAT
AAATGCTGCCATCCCTGCTTTCCGTTTTATTCTTCCTGCTCTATGCAGTG
AACGCTGTTCCACTGGCGCCCCGGGCGAGTGCACTCGCCGGGATCGACAC
CAAGTCCTTCTCTAAGACCAAAGATTATCCCCTTCCCAACCTGGGCAACA
TCGTTGCTCATGACCCTAATGTCATTCAGCATGATGGCTATTTCTACTTG
TACAAAGGTGGTGTGCACATTCCGATTCACAGAGCCCGCTCCCTCAGTGG
GCCTTGGGAACAGGTCGGGACCGTCCTGGACGACTCCAGCGTGATCCCGA
AACAGAACCGCTCTCGTCCTTGGGCCCCTACGACCATTCAGCACGACAAC
CGTTTCTACTGCTTCTACGCGATCAGCGAGAACGGCAGTCGCGACAGCGC
CATTGGAGTCGCCTCTTCGGATACTCCCGTCGGTGGAAACTGGACGGACC
ATGGCGCTGTCGTCAACACCGGCAAGGGAGACCTGTCGGACATCTATCCT
TACTCGGTATCCAATGCGATAGACGGCGCATTCATCACCGATCAACAGAC
CGGACAGTCTCACCTGCTTTACGGGAGCTATTGGCATGGTATTTTCTCGG
TGCCATTGGCTGATGATCTCCTTTCCGTCAAAACCCCGAAGACCCCAAAC
GCGACCAACCTGGCCTACATCCCAGATGCCAAGTCCAAGCCTATCGAGGG
CTCTTTCATGACTTACAAGGCGCCTTACTACTACCTGTGGTTCAGTCACG
GCAAATGTTGTCACTTTGATATTCACGCTTTTCCGCCCATGGGAGACGAG
TACAACATCCGGGTCGGTAGATCTAAGAGTGCGACAGGTCCTTTCGTGGA
TAAGGATGGCCATGATACCCTCAAGGGCGGTGGTACCATCGTCTACGGCT
CCAACCATGGAATTGTCTATGCCCCTGGTGGAGTGGGCGTGTTGATCAAC
AATGGCAGCGAAGCCGATGTCTTGTATTACCATTATCTCAACACTACGTC
TGGTTTCGCACAGGGAGACGCGCACTTGGGATGGAACTATCTGCACTATG
TAAATGGATGGCCAGTGGCTGTCGAGGGGTATGTGAATGCCAACGGCAAA
TAAATGCTGCCATCCCTGCTTTCCGTTTTATTCTTCCTGCTCTATGCAGT
GAACGCTGTTCCACTGGCGCCCCGGGCGAGTGCACTCGCCGGGATCGACA
CCAAGTCCTTCTCTAAGACCAAAGATTATCCCCTTCCCAACCTGGGCAAC
ATCGTTGCTCATGACCCTAATGTCATTCAGCATGATGGCTATTTCTACTT
GTACAAAGGTGGTGTGCACATTCCGATTCACAGAGCCCGCTCCCTCAGTG
GGCCTTGGGAACAGGTCGGGACCGTCCTGGACGACTCCAGCGTGATCCCG
AAACAGAACCGCTCTCGTCCTTGGGCCCCTACGACCATTCAGCACGACAA
CCGTTTCTACTGCTTCTACGCGATCAGCGAGAACGGCAGTCGCGACAGCG
CCATTGGAGTCGCCTCTTCGGATACTCCCGTCGGTGGAAACTGGACGGAC
CATGGCGCTGTCGTCAACACCGGCAAGGGAGACCTGTCGGACATCTATCC
TTACTCGGTATCCAATGCGATAGACGGCGCATTCATCACCGATCAACAGA
CCGGACAGTCTCACCTGCTTTACGGGAGCTATTGGCATGGTATTTTCTCG
GTGCCATTGGCTGATGATCTCCTTTCCGTCAAAACCCCGAAGACCCCAAA
CGCGACCAACCTGGCCTACATCCCAGATGCCAAGTCCAAGCCTATCGAGG
GCTCTTTCATGACTTACAAGGCGCCTTACTACTACCTGTGGTTCAGTCAC
GGCAAATGTTGTCACTTTGATATTCACGCTTTTCCGCCCATGGGAGACGA
GTACAACATCCGGGTCGGTAGATCTAAGAGTGCGACAGGTCCTTTCGTGG
ATAAGGATGGCCATGATACCCTCAAGGGCGGTGGTACCATCGTCTACGGC
TCCAACCATGGAATTGTCTATGCCCCTGGTGGAGTGGGCGTGTTGATCAA
CAATGGCAGCGAAGCCGATGTCTTGTATTACCATTATCTCAACACTACGT
CTGGTTTCGCACAGGGAGACGCGCACTTGGGATGGAACTATCTGCACTAT
GTAAATGGATGGCCAGTGGCTGTCGAGGGGTATGTGAATGCCAACGGCAA
ATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0046558arabinan endo-1,5-alpha-L-arabinosidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010009CBS51388_010009Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010009-T1.exon1CBS51388_010009-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010009-T1.exon2CBS51388_010009-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010009-T1.exon3CBS51388_010009-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_010009-T1.exon4CBS51388_010009-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010009-T1.cdsCBS51388_010009-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010009-T1CBS51388_010009-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH43_30
NoteCAZy:GH43_7
NoteCAZy:GH43_8
NoteCAZy:GH43_4
NoteCAZy:GH43_3
NoteCAZy:GH43
NoteCAZy:GH43_5
NoteCAZy:GH43_6
DBxrefInterPro:IPR006710
DBxrefInterPro:IPR016840
DBxrefInterPro:IPR023296
DBxrefPFAM:PF04616
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:596168..597422 +
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