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CBS51388_010023-T1, CBS51388_010023-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010023-T1
Unique NameCBS51388_010023-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:638532..639591+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010023-T1 ID=CBS51388_010023-T1|Name=CBS51388_010023-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1060bp|location=Sequence derived from alignment at An16:638532..639591+ (Aspergillus niger CBS 513.88)
ATGGGTGTCACCTTCGACAAGTGCGAGACCCGCCCGGCCAACATTGACGC
CATCCTCAATGGCCTCGACCGCTACAACCCCGAGACCACCACTGTCTTCC
AGGACTATGTCGCCCAGCAGTGCGAGGACCGCACCTTCGACTGCTACGCC
AACCTGGCCTTGCTGAAGTTGTGAGTTCATGCGCCTTTCTATCCAGTTCA
AAACACTTTCAGCCGAAACATAAAGAGCTCCGACGCGGGGAACCATTTTG
GTTTTATGTGATGAAGAATCTTATATCATTATCACGTTTCCTATTACCTG
ACACCCTACTTTGGGGGATGTCGAGACTCCAATTCTCCTGAAACAAAACC
ATGATCTCAACTTTTATTCTATCGCATGTACATCATACCTGAATAGCGAT
GCTAACCCCTTCACGCCCTCTGACAGGTACCAGTTCAACCCCCACCTTCT
CCAGGCGGAGACCGTCACCAACGTCCTCGTCAAGGCCCTGACTGTCTTCC
CCTCTCCCGCTTTCTCCCTCTGCCTTGCTCTTCTCCCCGCCCACACTCAG
CCCTTCCAGGCCTCCGACGCTGAGGCCCAGGCCGCCGCCCAGACCTCCGA
CTTCGTCGAGTCGATCCAGAAGCTCGCCCGCCTCTCCACCCTCCTCGAGT
CTGCCCAGTACACCCAGTTCTGGTCCACCCTGAACTCGGACGACCTGTAC
GCTGACCTTGTTGCCGACGTTGCCGGATTCGAGGAGCTCGTGCGCATCCG
CATTGCCGTCGAGGTCGGCAAGACCTTCCGTGAGATCCCTGCCGAGGTTC
TGGAGCAGTGGCTCGACCTGCGCAGCCGCGAGGCTCTCGAGAAGTTCGTC
GCCGAGGTCTGCAGCTGGGAGGTTGACAAGTCTGGCGCCAACACCGTGAT
CAAGGTGCCCACCAACAAGGAGAACGAGGCCCGCAGCGAGGTCAAGAGCG
AGCGCGTCGGCGTCGACATGTTCGGCCGTGTCATCCGCCGTGGTTCGAGC
AGGCTGCATGAGCGGATCGATAAAAGATATCCGCATCGAACGCAGCCTTT
CTCGTTCTAG
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Coding sequence (CDS) from alignment at An16:638532..639591+

>CBS51388_010023-T1 ID=CBS51388_010023-T1|Name=CBS51388_010023-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1608bp|location=Sequence derived from alignment at An16:638532..639591+ (Aspergillus niger CBS 513.88)
ATGGGTGTCACCTTCGACAAGTGCGAGACCCGCCCGGCCAACATTGACGC
CATCCTCAATGGCCTCGACCGCTACAACCCCGAGACCACCACTGTCTTCC
AGGACTATGTCGCCCAGCAGTGCGAGGACCGCACCTTCGACTGCTACGCC
AACCTGGCCTTGCTGAAGTTGTACCAGTTCAACCCCCACCTTCTCCAGGC
GGAGACCGTCACCAACGTCCTCGTCAAGGCCCTGACTGTCTTCCCCTCTC
CCGCTTTCTCCCTCTGCCTTGCTCTTCTCCCCGCCCACACTCAGCCCTTC
CAGGCCTCCGACGCTGAGGCCCAGGCCGCCGCCCAGACCTCCGACTTCGT
CGAGTCGATCCAGAAGCTCGCCCGCCTCTCCACCCTCCTCGAGTCTGCCC
AGTACACCCAGTTCTGGTCCACCCTGAACTCGGACGACCTGTACGCTGAC
CTTGTTGCCGACGTTGCCGGATTCGAGGAGCTCGTGCGCATCCGCATTGC
CGTCGAGGTCGGCAAGACCTTCCGTGAGATCCCTGCCGAGGTTCTGGAGC
AGTGGCTCGACCTGCGCAGCCGCGAGGCTCTCGAGAAGTTCGTCGCCGAG
GTCTGCAGCTGGGAGGTTGACAAGTCTGGCGCCAACACCGTGATCAAGGT
GCCCACCAACAAGGAGAACGAGGCCCGCAGCGAGGTCAAGAGCGAGCGCG
TCGGCGTCGACATGTTCGGCCGTGTCATCCGCCGTGGTTCGAGCAGGCTG
CATGAGCGGATCGATAAAAGATATCCGCATCGAACGCAGCCTTTCTCGTT
CTAGATGGGTGTCACCTTCGACAAGTGCGAGACCCGCCCGGCCAACATTG
ACGCCATCCTCAATGGCCTCGACCGCTACAACCCCGAGACCACCACTGTC
TTCCAGGACTATGTCGCCCAGCAGTGCGAGGACCGCACCTTCGACTGCTA
CGCCAACCTGGCCTTGCTGAAGTTGTACCAGTTCAACCCCCACCTTCTCC
AGGCGGAGACCGTCACCAACGTCCTCGTCAAGGCCCTGACTGTCTTCCCC
TCTCCCGCTTTCTCCCTCTGCCTTGCTCTTCTCCCCGCCCACACTCAGCC
CTTCCAGGCCTCCGACGCTGAGGCCCAGGCCGCCGCCCAGACCTCCGACT
TCGTCGAGTCGATCCAGAAGCTCGCCCGCCTCTCCACCCTCCTCGAGTCT
GCCCAGTACACCCAGTTCTGGTCCACCCTGAACTCGGACGACCTGTACGC
TGACCTTGTTGCCGACGTTGCCGGATTCGAGGAGCTCGTGCGCATCCGCA
TTGCCGTCGAGGTCGGCAAGACCTTCCGTGAGATCCCTGCCGAGGTTCTG
GAGCAGTGGCTCGACCTGCGCAGCCGCGAGGCTCTCGAGAAGTTCGTCGC
CGAGGTCTGCAGCTGGGAGGTTGACAAGTCTGGCGCCAACACCGTGATCA
AGGTGCCCACCAACAAGGAGAACGAGGCCCGCAGCGAGGTCAAGAGCGAG
CGCGTCGGCGTCGACATGTTCGGCCGTGTCATCCGCCGTGGTTCGAGCAG
GCTGCATGAGCGGATCGATAAAAGATATCCGCATCGAACGCAGCCTTTCT
CGTTCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: Molecular Function
TermDefinition
GO:0043022ribosome binding
GO:0003743translation initiation factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006446regulation of translational initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010023CBS51388_010023Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010023-T1.exon1CBS51388_010023-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010023-T1.exon2CBS51388_010023-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010023-T1.cdsCBS51388_010023-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010023-T1CBS51388_010023-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR016024
DBxrefInterPro:IPR000717
DBxrefInterPro:IPR009374
DBxrefInterPro:IPR033464
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR016020
DBxrefPFAM:PF10075
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:638532..639591 +
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