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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:640234..641628- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010024-T1 ID=CBS51388_010024-T1|Name=CBS51388_010024-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1395bp|location=Sequence derived from alignment at An16:640234..641628- (Aspergillus niger CBS 513.88)
ATGGATCCCTACGACAGCGACTCCTCCTTCGACGATGAGGGGGACTTCAG
CGAGACCAACGTGCTGCTGGGCTACGCAGCCGACGAGATTGTAGAAGACA
CCATCAGTCATCTGGGAGGCTGGCCAGTACGTACAATATTCAATTCCACC
TCTTCATCCTCCTTCCTCACCCCGACTAACCAATACCCCCCCTCACAGAC
CTGGCTCGACGACGCTACCCCGCCTCCCGGCGACTTCGCCAAATGCAAAG
TCTGCAACCAGCCCATGCTCCTCCTCCTCGAACTGCACGGCGACCTCCCC
AACGACTTCCCTGACGATGAGCGCCGCCTCTACATCTTCTCCTGCCCCCG
CAAAGCCTGCAACCGCAAACCAGGCAGTATCCGGGCTCTGCGCGCCACCA
GAAAGCTGAAGATCGAGCCCCAACAACAGCCTCCCCGCCAGAGGGAAGAA
CAAAAGCCAGAGCCCCCGAAAGAAGAAGAAGAGAAGAAGCCCGCCGCAGC
AAAGCCAGACCTCGGAGCCAGCCTATTCGGCTCCTCCACTCTCACCGGCA
GCGTCTCCGCCAGCGCAAACCCCTTCTCCTCCGGCGCTTCCTCCACTAGC
AACAACAACAACCCATTCGCAGCCCCAGCACCCTCCCCCGGCCTCGCCGC
CAAACCGACCCCCTCCCCAGCACCTACCCTCTCCGAATCCTTTGCCGACA
AAGTCCGCATCTCCTCTCCTCAACAACAACAACAACCCAAAACCAACCTC
ATCCCACCCCCCGAAGCCTCCACCGGCCCCAGGACCCCCTGGCCCGCCCA
ATCCGACTTCCCAGCCCCTTACACGAACTTCTATCTCGATGCCGAATACG
AAACCATGTCTCGTCCCTCCACGCCCACTATCCCTGCCGACGTGACAATT
GACAACACAGAAGAAGAAGGTCCCAACGGCGGCGCAGCGGAGCTGAAGGA
CACCTTTGAATCCGAGCTCGATAAGGCCTTCATCCGCTTCTCTACTCGTC
TAGGCCATAACCCTGAACAAGTGTTGAGATATGAATTCCGTGGTTCACCA
TTGCTCTATTCCCATGCTGATGCGGTGGGCAAGCGGCTTCATGATCCGTC
GAAGACAGCGAACCCCAGTGCCAAGGTTACGACGGTTGGTGGAGGGAGTC
GCATGCCTCGCTGTGAGTATTGTGGTAGCGAGCGCGTGTTTGAGTTGCAG
CTTGTGCCGCATGCTATTAGCGTGTTGGAGGAAGGGAGGGAGGGGGTTGG
GCTTGGACCCAAGGATGATGCTGGTATGGAGTGGGGGACGATTATCTTGG
GAGTTTGTGGGAAGGATTGCGGTCCTAACCAGGTTGGGGTTGTTGGGTAT
AGAGAGGAGTGGGCTGGTGTGCAGTGGGAGGAACCGACGAAGTAA back to topCoding sequence (CDS) from alignment at An16:640234..641628- >CBS51388_010024-T1 ID=CBS51388_010024-T1|Name=CBS51388_010024-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2646bp|location=Sequence derived from alignment at An16:640234..641628- (Aspergillus niger CBS 513.88)
ACCTGGCTCGACGACGCTACCCCGCCTCCCGGCGACTTCGCCAAATGCAA
AGTCTGCAACCAGCCCATGCTCCTCCTCCTCGAACTGCACGGCGACCTCC
CCAACGACTTCCCTGACGATGAGCGCCGCCTCTACATCTTCTCCTGCCCC
CGCAAAGCCTGCAACCGCAAACCAGGCAGTATCCGGGCTCTGCGCGCCAC
CAGAAAGCTGAAGATCGAGCCCCAACAACAGCCTCCCCGCCAGAGGGAAG
AACAAAAGCCAGAGCCCCCGAAAGAAGAAGAAGAGAAGAAGCCCGCCGCA
GCAAAGCCAGACCTCGGAGCCAGCCTATTCGGCTCCTCCACTCTCACCGG
CAGCGTCTCCGCCAGCGCAAACCCCTTCTCCTCCGGCGCTTCCTCCACTA
GCAACAACAACAACCCATTCGCAGCCCCAGCACCCTCCCCCGGCCTCGCC
GCCAAACCGACCCCCTCCCCAGCACCTACCCTCTCCGAATCCTTTGCCGA
CAAAGTCCGCATCTCCTCTCCTCAACAACAACAACAACCCAAAACCAACC
TCATCCCACCCCCCGAAGCCTCCACCGGCCCCAGGACCCCCTGGCCCGCC
CAATCCGACTTCCCAGCCCCTTACACGAACTTCTATCTCGATGCCGAATA
CGAAACCATGTCTCGTCCCTCCACGCCCACTATCCCTGCCGACGTGACAA
TTGACAACACAGAAGAAGAAGGTCCCAACGGCGGCGCAGCGGAGCTGAAG
GACACCTTTGAATCCGAGCTCGATAAGGCCTTCATCCGCTTCTCTACTCG
TCTAGGCCATAACCCTGAACAAGTGTTGAGATATGAATTCCGTGGTTCAC
CATTGCTCTATTCCCATGCTGATGCGGTGGGCAAGCGGCTTCATGATCCG
TCGAAGACAGCGAACCCCAGTGCCAAGGTTACGACGGTTGGTGGAGGGAG
TCGCATGCCTCGCTGTGAGTATTGTGGTAGCGAGCGCGTGTTTGAGTTGC
AGCTTGTGCCGCATGCTATTAGCGTGTTGGAGGAAGGGAGGGAGGGGGTT
GGGCTTGGACCCAAGGATGATGCTGGTATGGAGTGGGGGACGATTATCTT
GGGAGTTTGTGGGAAGGATTGCGGTCCTAACCAGGTTGGGGTTGTTGGGT
ATAGAGAGGAGTGGGCTGGTGTGCAGTGGGAGGAACCGACGAAGTAAATG
GATCCCTACGACAGCGACTCCTCCTTCGACGATGAGGGGGACTTCAGCGA
GACCAACGTGCTGCTGGGCTACGCAGCCGACGAGATTGTAGAAGACACCA
TCAGTCATCTGGGAGGCTGGCCAACCTGGCTCGACGACGCTACCCCGCCT
CCCGGCGACTTCGCCAAATGCAAAGTCTGCAACCAGCCCATGCTCCTCCT
CCTCGAACTGCACGGCGACCTCCCCAACGACTTCCCTGACGATGAGCGCC
GCCTCTACATCTTCTCCTGCCCCCGCAAAGCCTGCAACCGCAAACCAGGC
AGTATCCGGGCTCTGCGCGCCACCAGAAAGCTGAAGATCGAGCCCCAACA
ACAGCCTCCCCGCCAGAGGGAAGAACAAAAGCCAGAGCCCCCGAAAGAAG
AAGAAGAGAAGAAGCCCGCCGCAGCAAAGCCAGACCTCGGAGCCAGCCTA
TTCGGCTCCTCCACTCTCACCGGCAGCGTCTCCGCCAGCGCAAACCCCTT
CTCCTCCGGCGCTTCCTCCACTAGCAACAACAACAACCCATTCGCAGCCC
CAGCACCCTCCCCCGGCCTCGCCGCCAAACCGACCCCCTCCCCAGCACCT
ACCCTCTCCGAATCCTTTGCCGACAAAGTCCGCATCTCCTCTCCTCAACA
ACAACAACAACCCAAAACCAACCTCATCCCACCCCCCGAAGCCTCCACCG
GCCCCAGGACCCCCTGGCCCGCCCAATCCGACTTCCCAGCCCCTTACACG
AACTTCTATCTCGATGCCGAATACGAAACCATGTCTCGTCCCTCCACGCC
CACTATCCCTGCCGACGTGACAATTGACAACACAGAAGAAGAAGGTCCCA
ACGGCGGCGCAGCGGAGCTGAAGGACACCTTTGAATCCGAGCTCGATAAG
GCCTTCATCCGCTTCTCTACTCGTCTAGGCCATAACCCTGAACAAGTGTT
GAGATATGAATTCCGTGGTTCACCATTGCTCTATTCCCATGCTGATGCGG
TGGGCAAGCGGCTTCATGATCCGTCGAAGACAGCGAACCCCAGTGCCAAG
GTTACGACGGTTGGTGGAGGGAGTCGCATGCCTCGCTGTGAGTATTGTGG
TAGCGAGCGCGTGTTTGAGTTGCAGCTTGTGCCGCATGCTATTAGCGTGT
TGGAGGAAGGGAGGGAGGGGGTTGGGCTTGGACCCAAGGATGATGCTGGT
ATGGAGTGGGGGACGATTATCTTGGGAGTTTGTGGGAAGGATTGCGGTCC
TAACCAGGTTGGGGTTGTTGGGTATAGAGAGGAGTGGGCTGGTGTGCAGT
GGGAGGAACCGACGAAGTAAATGGATCCCTACGACAGCGACTCCTCCTTC
GACGATGAGGGGGACTTCAGCGAGACCAACGTGCTGCTGGGCTACGCAGC
CGACGAGATTGTAGAAGACACCATCAGTCATCTGGGAGGCTGGCCA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263F11 |
| DBxref | InterPro:IPR007320 |
| DBxref | PFAM:PF04194 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:640234..641628 - |
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