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CBS51388_010033-T1, CBS51388_010033-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010033-T1
Unique NameCBS51388_010033-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:662332..663386+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010033-T1 ID=CBS51388_010033-T1|Name=CBS51388_010033-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1055bp|location=Sequence derived from alignment at An16:662332..663386+ (Aspergillus niger CBS 513.88)
ATGGCCACCCCGGCTCAATGTTACTACTGTTTCGAGACCCTTGCTGCCTC
CTATAGGCGCAGGGAACCCATCAGTCTTGCGTCTGTGGAAGAGCTCTGGG
AACAGCACGAACAGTATAAAAAGCTCGCCGCGTTAGATGAGGACGACGAT
TCGCAATTTGTAGACGAGGACGAGAACACCGCGCCGCTTTCTGGAAAGAG
CAGTCGCTCTCAGAAGATCAAAGTGCCCCGAGTCAGCCGACTTCAGTCTG
GCTCGAGCTCTTCTACAACACAATCCCTTGCGTCTACCAACTCATCGCAA
TCTGTCTTGTCAAGCTCAACCACAGTCACGACACCCAGCTCCTCCTCGGA
CACGGCCGGTGGCAAGCCGAGAGAAGACAAATATCCTCTCTTTGTAACAT
GGAATACCGTTTCGAAACACGGTCACAAGTCACTCCGGGGTTGCATTGGC
ACATTTGAGGCGCAGGAGCTTGCCGAGGGCCTGAAATCTTACGCTCTCAC
GTCGTACGTATATCCCTTTCACCATCCATGAGACCGGGCCTTCCACCTAC
ACCTTGGCAAGGCTCGCGCATGCTAACCGCCCACAGCGCATTTGATGATA
CTCGGTTTTCCCCGATCCCGGAGTCTCTTCTGCCCTCTCTCTCTTGCTCA
TTGACACTTCTCGGGTCTTTCGAGCCATGCACCAACGCTCTGGACTGGAT
CCTTGGGGTGCATGGCCTTCGCATCTCCTTCATTCATCGCGGCAGACGCT
ATGGCGCAACCTACCTCCCTGATGTCGCGGTCGAGCAAGGATGGACTAAA
GAAGAGACCGTCAACAGCCTGATGCACAAAGCAGGCTGGGATGGGCCTTC
CGAGAGCGTGGCGAGACGGTTTTTGCGAGGCAGCAGCAATGCTGGTCATG
GGACTGCCGGCGCAACCAAGCCATGGGAGCAGGTCTCCGATTTCCGAGCC
GTCAAGTATCAGGGCCTCAAGGCCAGCAGCAGCTATGCGGAATGGCAAGA
ATGGCGGCAGTGGGTCCTCTCGCTGGACGATGGGAGCCAGCAGCTCTTGA
GCTGA
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Coding sequence (CDS) from alignment at An16:662332..663386+

>CBS51388_010033-T1 ID=CBS51388_010033-T1|Name=CBS51388_010033-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1944bp|location=Sequence derived from alignment at An16:662332..663386+ (Aspergillus niger CBS 513.88)
ATGGCCACCCCGGCTCAATGTTACTACTGTTTCGAGACCCTTGCTGCCTC
CTATAGGCGCAGGGAACCCATCAGTCTTGCGTCTGTGGAAGAGCTCTGGG
AACAGCACGAACAGTATAAAAAGCTCGCCGCGTTAGATGAGGACGACGAT
TCGCAATTTGTAGACGAGGACGAGAACACCGCGCCGCTTTCTGGAAAGAG
CAGTCGCTCTCAGAAGATCAAAGTGCCCCGAGTCAGCCGACTTCAGTCTG
GCTCGAGCTCTTCTACAACACAATCCCTTGCGTCTACCAACTCATCGCAA
TCTGTCTTGTCAAGCTCAACCACAGTCACGACACCCAGCTCCTCCTCGGA
CACGGCCGGTGGCAAGCCGAGAGAAGACAAATATCCTCTCTTTGTAACAT
GGAATACCGTTTCGAAACACGGTCACAAGTCACTCCGGGGTTGCATTGGC
ACATTTGAGGCGCAGGAGCTTGCCGAGGGCCTGAAATCTTACGCTCTCAC
GTCCGCATTTGATGATACTCGGTTTTCCCCGATCCCGGAGTCTCTTCTGC
CCTCTCTCTCTTGCTCATTGACACTTCTCGGGTCTTTCGAGCCATGCACC
AACGCTCTGGACTGGATCCTTGGGGTGCATGGCCTTCGCATCTCCTTCAT
TCATCGCGGCAGACGCTATGGCGCAACCTACCTCCCTGATGTCGCGGTCG
AGCAAGGATGGACTAAAGAAGAGACCGTCAACAGCCTGATGCACAAAGCA
GGCTGGGATGGGCCTTCCGAGAGCGTGGCGAGACGGTTTTTGCGAGGCAG
CAGCAATGCTGGTCATGGGACTGCCGGCGCAACCAAGCCATGGGAGCAGG
TCTCCGATTTCCGAGCCGTCAAGTATCAGGGCCTCAAGGCCAGCAGCAGC
TATGCGGAATGGCAAGAATGGCGGCAGTGGGTCCTCTCGCTGGACGATGG
GAGCCAGCAGCTCTTGAGCTGAATGGCCACCCCGGCTCAATGTTACTACT
GTTTCGAGACCCTTGCTGCCTCCTATAGGCGCAGGGAACCCATCAGTCTT
GCGTCTGTGGAAGAGCTCTGGGAACAGCACGAACAGTATAAAAAGCTCGC
CGCGTTAGATGAGGACGACGATTCGCAATTTGTAGACGAGGACGAGAACA
CCGCGCCGCTTTCTGGAAAGAGCAGTCGCTCTCAGAAGATCAAAGTGCCC
CGAGTCAGCCGACTTCAGTCTGGCTCGAGCTCTTCTACAACACAATCCCT
TGCGTCTACCAACTCATCGCAATCTGTCTTGTCAAGCTCAACCACAGTCA
CGACACCCAGCTCCTCCTCGGACACGGCCGGTGGCAAGCCGAGAGAAGAC
AAATATCCTCTCTTTGTAACATGGAATACCGTTTCGAAACACGGTCACAA
GTCACTCCGGGGTTGCATTGGCACATTTGAGGCGCAGGAGCTTGCCGAGG
GCCTGAAATCTTACGCTCTCACGTCCGCATTTGATGATACTCGGTTTTCC
CCGATCCCGGAGTCTCTTCTGCCCTCTCTCTCTTGCTCATTGACACTTCT
CGGGTCTTTCGAGCCATGCACCAACGCTCTGGACTGGATCCTTGGGGTGC
ATGGCCTTCGCATCTCCTTCATTCATCGCGGCAGACGCTATGGCGCAACC
TACCTCCCTGATGTCGCGGTCGAGCAAGGATGGACTAAAGAAGAGACCGT
CAACAGCCTGATGCACAAAGCAGGCTGGGATGGGCCTTCCGAGAGCGTGG
CGAGACGGTTTTTGCGAGGCAGCAGCAATGCTGGTCATGGGACTGCCGGC
GCAACCAAGCCATGGGAGCAGGTCTCCGATTTCCGAGCCGTCAAGTATCA
GGGCCTCAAGGCCAGCAGCAGCTATGCGGAATGGCAAGAATGGCGGCAGT
GGGTCCTCTCGCTGGACGATGGGAGCCAGCAGCTCTTGAGCTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010033CBS51388_010033Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010033-T1.exon1CBS51388_010033-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010033-T1.exon2CBS51388_010033-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010033-T1.cdsCBS51388_010033-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010033-T1CBS51388_010033-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263ZSC
DBxrefInterPro:IPR036071
DBxrefInterPro:IPR027485
DBxrefInterPro:IPR023473
DBxrefInterPro:IPR002733
DBxrefPFAM:PF01871
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:662332..663386 +
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