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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:676485..678190- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010038-T1 ID=CBS51388_010038-T1|Name=CBS51388_010038-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1706bp|location=Sequence derived from alignment at An16:676485..678190- (Aspergillus niger CBS 513.88)
ATGGCCGACTACCTTCTGTTCGAGGGCCCCATGGGCTACTCGCTTTTCAA
GGTCGCCCACCAGGGTGACAGCGTTGGAAACCGCTTGAAGGAGGTTCAAG
AAGGTGTTAACGACTTGGCCAGTTTTGGTAAAATGGTCGAACTGTCCAGT
TTCCTGCCTTTCGAGTATGTGGTTCAATTTTTCCCATAGGATCACTTTCC
CGCAGGAATCTGACAACTTCCAGGAACAACAAGCAGGCTCTCAGTGAAAT
CAACGATGTCTCCGAGGGTGTCGCTTCGGACACTCTGATCTCTTTCCTCG
AATTGAACTTGCCCAAGCCTAACAAGAAGAAGAAGGTTGTTCTGGGTCTT
GCCGACAAGGCCTTGGCTGGAAGTATCAAGTCTGCCTTCTCTTTCGTTGA
CTGCGAGACTGGAGACACCAGCGAAGTCGTCCAGGATATGCTTCGTGGAG
TTAGACTGCACGCCACCAAGCTGCTGAAGCAGCTGCGTGAGGGTGATATG
GACACCGCTCAGCTTGGTCTTGGTCACGCTTACTCTCGCGCCAAGGTTAA
GTTTTCCGTTCAGCGCGATGACAACCACATCATCCAGGCCATTGCTATCC
TCGACCAGCTCGACAAGGCCATCAACACTTTCTCCATGAGAGTCAGGGAA
TGGTACTCCTGGCACTTCCCCGAACTCTACAAGATTGTCTCCGACAACCA
ACGCTACGCGCAGATTGCCTTGTTCGTCCAGGACAAGAAGAGCTTGAACG
ACGAGAAGTTGCACGACATTGCTGCCCTTGTGGAGGATGATGAGGGTGTC
GCCCAGAGTATCATCGACGCTGCTAAGCACAGCATGGGTCAGGAGATCTC
CGAGACCGACATGGAGAACGTTATCTCTTTCGCCCAGCGCGTTGTCAGCC
TGTCCAAGTACCGCAAGTCTCTCCACCAGTACCTGATTTCCAAGATGAGC
GTTGTCGCCCCCAACCTTGCTGCCCTTATTGGTGAGATCGTTGGTGCTCG
CTTGATCTCCCACGCTGGTAGCTTGACCAACCTGTCCAAGTACCCCGCTT
CGACGGTTCAGATTCTCGGTGCTGAGAAGGCCCTCTTCAGAGCCTTGAAG
ACCAAGGGCAACACCCCCAAGTACGGTCTTCTGTACCACTCCTCTTTCAT
TGGAAGAGCTGGTCCCAAGAACAAGGGTCGCATCTCTCGCTTCCTTGCCA
ACAAGTGCTCCATCGCCTCCAGAATTGACAACTTCTCCGAGGAGCCCTCC
ACCAAGTTCGGAGAGGCCCTTAAGAAGCAGGTTGAGGAGCGTCTGGACTT
CTACGCCACTGGTGCTGCCCCTACCAAGAACGAAGTCGCCATGGTAAGTC
AACATAGCTAGTGTGATCGCTAGGACACTAGTGAACCACAAACCCCTTTT
CTCCGTAACAATCACTGATGGTCCTTACAGAAAAACGCCATGGATGCTGT
CCTTGCTGATATGGACATTGACGGCGCTGAGAGCGATGCCGAGATGCAGG
ATGCTGATGAGAAGGCCGAGAAGAAGGACAAGAAGGAGAAGAAGGAAAAG
AAGGACAAGAAGGAAAAGAAGGAGAAGAAGGAAAAGGGCGAGAAGGAGGA
GAAGAAGAAGAAGCGCAAGTCCGACGTTGGCGAGGGCGAGTCCGAGAAGA
AGAAGCGGAAGCACGACAGCGATGCTGAGCCGTCCAAAAAGAAGAAGAAG
GTTTAA back to topCoding sequence (CDS) from alignment at An16:676485..678190- >CBS51388_010038-T1 ID=CBS51388_010038-T1|Name=CBS51388_010038-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4680bp|location=Sequence derived from alignment at An16:676485..678190- (Aspergillus niger CBS 513.88)
AAAAACGCCATGGATGCTGTCCTTGCTGATATGGACATTGACGGCGCTGA
GAGCGATGCCGAGATGCAGGATGCTGATGAGAAGGCCGAGAAGAAGGACA
AGAAGGAGAAGAAGGAAAAGAAGGACAAGAAGGAAAAGAAGGAGAAGAAG
GAAAAGGGCGAGAAGGAGGAGAAGAAGAAGAAGCGCAAGTCCGACGTTGG
CGAGGGCGAGTCCGAGAAGAAGAAGCGGAAGCACGACAGCGATGCTGAGC
CGTCCAAAAAGAAGAAGAAGGTTTAAGAACAACAAGCAGGCTCTCAGTGA
AATCAACGATGTCTCCGAGGGTGTCGCTTCGGACACTCTGATCTCTTTCC
TCGAATTGAACTTGCCCAAGCCTAACAAGAAGAAGAAGGTTGTTCTGGGT
CTTGCCGACAAGGCCTTGGCTGGAAGTATCAAGTCTGCCTTCTCTTTCGT
TGACTGCGAGACTGGAGACACCAGCGAAGTCGTCCAGGATATGCTTCGTG
GAGTTAGACTGCACGCCACCAAGCTGCTGAAGCAGCTGCGTGAGGGTGAT
ATGGACACCGCTCAGCTTGGTCTTGGTCACGCTTACTCTCGCGCCAAGGT
TAAGTTTTCCGTTCAGCGCGATGACAACCACATCATCCAGGCCATTGCTA
TCCTCGACCAGCTCGACAAGGCCATCAACACTTTCTCCATGAGAGTCAGG
GAATGGTACTCCTGGCACTTCCCCGAACTCTACAAGATTGTCTCCGACAA
CCAACGCTACGCGCAGATTGCCTTGTTCGTCCAGGACAAGAAGAGCTTGA
ACGACGAGAAGTTGCACGACATTGCTGCCCTTGTGGAGGATGATGAGGGT
GTCGCCCAGAGTATCATCGACGCTGCTAAGCACAGCATGGGTCAGGAGAT
CTCCGAGACCGACATGGAGAACGTTATCTCTTTCGCCCAGCGCGTTGTCA
GCCTGTCCAAGTACCGCAAGTCTCTCCACCAGTACCTGATTTCCAAGATG
AGCGTTGTCGCCCCCAACCTTGCTGCCCTTATTGGTGAGATCGTTGGTGC
TCGCTTGATCTCCCACGCTGGTAGCTTGACCAACCTGTCCAAGTACCCCG
CTTCGACGGTTCAGATTCTCGGTGCTGAGAAGGCCCTCTTCAGAGCCTTG
AAGACCAAGGGCAACACCCCCAAGTACGGTCTTCTGTACCACTCCTCTTT
CATTGGAAGAGCTGGTCCCAAGAACAAGGGTCGCATCTCTCGCTTCCTTG
CCAACAAGTGCTCCATCGCCTCCAGAATTGACAACTTCTCCGAGGAGCCC
TCCACCAAGTTCGGAGAGGCCCTTAAGAAGCAGGTTGAGGAGCGTCTGGA
CTTCTACGCCACTGGTGCTGCCCCTACCAAGAACGAAGTCGCCATGATGG
CCGACTACCTTCTGTTCGAGGGCCCCATGGGCTACTCGCTTTTCAAGGTC
GCCCACCAGGGTGACAGCGTTGGAAACCGCTTGAAGGAGGTTCAAGAAGG
TGTTAACGACTTGGCCAGTTTTGGTAAAATGGTCGAACTGTCCAGTTTCC
TGCCTTTCGAAAAAACGCCATGGATGCTGTCCTTGCTGATATGGACATTG
ACGGCGCTGAGAGCGATGCCGAGATGCAGGATGCTGATGAGAAGGCCGAG
AAGAAGGACAAGAAGGAGAAGAAGGAAAAGAAGGACAAGAAGGAAAAGAA
GGAGAAGAAGGAAAAGGGCGAGAAGGAGGAGAAGAAGAAGAAGCGCAAGT
CCGACGTTGGCGAGGGCGAGTCCGAGAAGAAGAAGCGGAAGCACGACAGC
GATGCTGAGCCGTCCAAAAAGAAGAAGAAGGTTTAAGAACAACAAGCAGG
CTCTCAGTGAAATCAACGATGTCTCCGAGGGTGTCGCTTCGGACACTCTG
ATCTCTTTCCTCGAATTGAACTTGCCCAAGCCTAACAAGAAGAAGAAGGT
TGTTCTGGGTCTTGCCGACAAGGCCTTGGCTGGAAGTATCAAGTCTGCCT
TCTCTTTCGTTGACTGCGAGACTGGAGACACCAGCGAAGTCGTCCAGGAT
ATGCTTCGTGGAGTTAGACTGCACGCCACCAAGCTGCTGAAGCAGCTGCG
TGAGGGTGATATGGACACCGCTCAGCTTGGTCTTGGTCACGCTTACTCTC
GCGCCAAGGTTAAGTTTTCCGTTCAGCGCGATGACAACCACATCATCCAG
GCCATTGCTATCCTCGACCAGCTCGACAAGGCCATCAACACTTTCTCCAT
GAGAGTCAGGGAATGGTACTCCTGGCACTTCCCCGAACTCTACAAGATTG
TCTCCGACAACCAACGCTACGCGCAGATTGCCTTGTTCGTCCAGGACAAG
AAGAGCTTGAACGACGAGAAGTTGCACGACATTGCTGCCCTTGTGGAGGA
TGATGAGGGTGTCGCCCAGAGTATCATCGACGCTGCTAAGCACAGCATGG
GTCAGGAGATCTCCGAGACCGACATGGAGAACGTTATCTCTTTCGCCCAG
CGCGTTGTCAGCCTGTCCAAGTACCGCAAGTCTCTCCACCAGTACCTGAT
TTCCAAGATGAGCGTTGTCGCCCCCAACCTTGCTGCCCTTATTGGTGAGA
TCGTTGGTGCTCGCTTGATCTCCCACGCTGGTAGCTTGACCAACCTGTCC
AAGTACCCCGCTTCGACGGTTCAGATTCTCGGTGCTGAGAAGGCCCTCTT
CAGAGCCTTGAAGACCAAGGGCAACACCCCCAAGTACGGTCTTCTGTACC
ACTCCTCTTTCATTGGAAGAGCTGGTCCCAAGAACAAGGGTCGCATCTCT
CGCTTCCTTGCCAACAAGTGCTCCATCGCCTCCAGAATTGACAACTTCTC
CGAGGAGCCCTCCACCAAGTTCGGAGAGGCCCTTAAGAAGCAGGTTGAGG
AGCGTCTGGACTTCTACGCCACTGGTGCTGCCCCTACCAAGAACGAAGTC
GCCATGATGGCCGACTACCTTCTGTTCGAGGGCCCCATGGGCTACTCGCT
TTTCAAGGTCGCCCACCAGGGTGACAGCGTTGGAAACCGCTTGAAGGAGG
TTCAAGAAGGTGTTAACGACTTGGCCAGTTTTGGTAAAATGGTCGAACTG
TCCAGTTTCCTGCCTTTCGAAAAAACGCCATGGATGCTGTCCTTGCTGAT
ATGGACATTGACGGCGCTGAGAGCGATGCCGAGATGCAGGATGCTGATGA
GAAGGCCGAGAAGAAGGACAAGAAGGAGAAGAAGGAAAAGAAGGACAAGA
AGGAAAAGAAGGAGAAGAAGGAAAAGGGCGAGAAGGAGGAGAAGAAGAAG
AAGCGCAAGTCCGACGTTGGCGAGGGCGAGTCCGAGAAGAAGAAGCGGAA
GCACGACAGCGATGCTGAGCCGTCCAAAAAGAAGAAGAAGGTTTAAGAAC
AACAAGCAGGCTCTCAGTGAAATCAACGATGTCTCCGAGGGTGTCGCTTC
GGACACTCTGATCTCTTTCCTCGAATTGAACTTGCCCAAGCCTAACAAGA
AGAAGAAGGTTGTTCTGGGTCTTGCCGACAAGGCCTTGGCTGGAAGTATC
AAGTCTGCCTTCTCTTTCGTTGACTGCGAGACTGGAGACACCAGCGAAGT
CGTCCAGGATATGCTTCGTGGAGTTAGACTGCACGCCACCAAGCTGCTGA
AGCAGCTGCGTGAGGGTGATATGGACACCGCTCAGCTTGGTCTTGGTCAC
GCTTACTCTCGCGCCAAGGTTAAGTTTTCCGTTCAGCGCGATGACAACCA
CATCATCCAGGCCATTGCTATCCTCGACCAGCTCGACAAGGCCATCAACA
CTTTCTCCATGAGAGTCAGGGAATGGTACTCCTGGCACTTCCCCGAACTC
TACAAGATTGTCTCCGACAACCAACGCTACGCGCAGATTGCCTTGTTCGT
CCAGGACAAGAAGAGCTTGAACGACGAGAAGTTGCACGACATTGCTGCCC
TTGTGGAGGATGATGAGGGTGTCGCCCAGAGTATCATCGACGCTGCTAAG
CACAGCATGGGTCAGGAGATCTCCGAGACCGACATGGAGAACGTTATCTC
TTTCGCCCAGCGCGTTGTCAGCCTGTCCAAGTACCGCAAGTCTCTCCACC
AGTACCTGATTTCCAAGATGAGCGTTGTCGCCCCCAACCTTGCTGCCCTT
ATTGGTGAGATCGTTGGTGCTCGCTTGATCTCCCACGCTGGTAGCTTGAC
CAACCTGTCCAAGTACCCCGCTTCGACGGTTCAGATTCTCGGTGCTGAGA
AGGCCCTCTTCAGAGCCTTGAAGACCAAGGGCAACACCCCCAAGTACGGT
CTTCTGTACCACTCCTCTTTCATTGGAAGAGCTGGTCCCAAGAACAAGGG
TCGCATCTCTCGCTTCCTTGCCAACAAGTGCTCCATCGCCTCCAGAATTG
ACAACTTCTCCGAGGAGCCCTCCACCAAGTTCGGAGAGGCCCTTAAGAAG
CAGGTTGAGGAGCGTCTGGACTTCTACGCCACTGGTGCTGCCCCTACCAA
GAACGAAGTCGCCATGATGGCCGACTACCTTCTGTTCGAGGGCCCCATGG
GCTACTCGCTTTTCAAGGTCGCCCACCAGGGTGACAGCGTTGGAAACCGC
TTGAAGGAGGTTCAAGAAGGTGTTAACGACTTGGCCAGTTTTGGTAAAAT
GGTCGAACTGTCCAGTTTCCTGCCTTTCGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036070 |
| DBxref | InterPro:IPR002687 |
| DBxref | InterPro:IPR042239 |
| DBxref | InterPro:IPR029012 |
| DBxref | InterPro:IPR012974 |
| DBxref | InterPro:IPR012976 |
| DBxref | PFAM:PF08156 |
| DBxref | PFAM:PF01798 |
| Product | snoRNP complex protein nop56 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:676485..678190 - |
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