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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:719515..721600+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010047-T1 ID=CBS51388_010047-T1|Name=CBS51388_010047-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2086bp|location=Sequence derived from alignment at An16:719515..721600+ (Aspergillus niger CBS 513.88)
ATGCCATCGGCCAACCCGCCAGCTGAGCGTCGCGACTCCACCCGCTCGGT
CATGTTGACGGACGTCCCCGCCCTCGGCGACTGCCCATTAGTAGACGACT
CGTCACTCTCGCACCGAAACAGCATCAGCACCACTGACGGCATATCTAAT
GATTCGCCCGCCTCGTGGGATGGCGACGCCCCCTCCGATAATTCTCCCTC
TGCCGAGGTCGACGTCAAGATTCAAGACGGCTTACACCATCCGTTTCCAA
CGACCGCAGACACCTCGCCGAAAACCTTCCGATTCAACGTGATCGCATCC
CACGGCATGGACGCTTCCATGGACGAGGTAACACCCAAGATCGAGGAGAT
AGATGATGTGGACGAGTTGCAGAGCATAAAACCGGTGGGAGTGGAGACAT
CGATGGCCAATGCGAGTTCTACCCATCCGGATTCCACGGCTGCTCCCGTC
AACGTCCCACGGAAACGTGGACGACCACGCAAACATCCGCTGCCAGCGCC
CGGGAATCAGATCAAAATCACCAAGGGTCGATCCAAAACGGGTTGTATCA
CTTGTCGCCGGCGGAAGAAGAAATGCGACGAGACCAAGCCAGCGTAAAGC
TCCCGTCCTCCTTTGACTGGTCCATCCTGTGTCGCAACGGTCGCAGTGGT
TAACTTTCTTTCCCTTCCTGCAGGTGTCTCAACTGTCAGAAGAATGCCGT
GGTATGCGAGGGCTACCCGCCAAAAGAAATATGGAAGAGTGGTAAGCAGA
AGCTTGAGGATGGTAAGTGCACCTTGGACCGTGGCATGCTCGAGCTGCTT
TGCTGTGCGTATTTACTATTCCTGGTTGCTTATCCGGCGCCTTTGATCCA
ATCACCTTGACACTTGTGTGAACGTTCTGACGCCTTAGTTTCACAGCAGT
TCGCACCCAGAACATGGTTGCCCGCTCTCTACCTCTGCTTATCGACGGCA
TCGAAACCGAGATTGACCGGCGCTTCCTCGATCATTTCGTCTACGGCTTT
AGTCGCGTTTTGACCCTGATCAACGATGACTCCAACCCGTTCAAGGAGAT
CTTGCTCCCGATGGCCACTCAGCACCGGGGTTTGATGCACTCGCTCATGT
GCCTCTCGGGATCGCACCTGTCGGGTCTCCATCATGTTCCAATGTTGGAG
GAGCGAAAGTTCTATCATTACCACCGCGCTATCAGGGATCTCAAGGACAA
TATCACAGCGTCTTCAGGTAATTCTGAGCAAGACCCTGAGCTTCTTATCG
AAGATCCCATCATCGCATCCACAATTGCTCTCAGCTTGAACACCATCTGT
GAAGGGGAAACCAAAGGGGAATACAGACCCCACATGGATGCCGCCCGGTA
TTTGCTGTCGACACAGCAACCGAGGAATGAGAAGTTCCGGCAGTTTATTG
TCGAGTTCTTCCAGTACCATGATGTCTCCAACTCCATCACTTCGCTGGAT
CGCCGCCCCGCCCATCTGCAGGGCGGCTTACGGCTGCCTGACTTTGTGCC
ACACGCGCAGGCAGGGATGTTCCTTGGAGTCTTTGATGGTCTATTCAATT
ATATCTCTGAGGTAACTCGAATTCGTGACCGGATTCGACAGCGGTCCAAT
GAAGGATACGAGCCTGCTGTTGACTACCAGATTCTGGGCGATGCCGTCTC
CATCGACTCCGCCATTCGAGCTTGGGAGACCTCGTATACGCCCAACACGC
CAAACTACTACCTGGCGCAACTATATCGCCAGTCCACCTGGGTCTACCTG
TACCGCACCATCCGCCCGTCCCGACCAAGCGAGAAAATTGCACAGGTTGT
GGACGATGGACTTTCTTTCCTGGATCAGCTGCCTCAGGATGCAGGCGCCT
ACAGTATTGTGCTGATGCCACTGTTCCTCTTGGGCTGCTCTGCCTTCCTG
CCCCGCCAGCGGGAGAGGATCAAGAAGGGCTTTGAGACCCTCAAGGGCTA
CTCCAACCTCCGCAACATCGAACCCGCCTTCAAGGTCGTTGAGCGAGTGT
GGGAAGTGATGGACACGAAAATGGAAGAAAGTTGGGACTGGGAGAAGATC
ATCAGCGACATGAACATGGATTTCTTGATCACCTAG back to topCoding sequence (CDS) from alignment at An16:719515..721600+ >CBS51388_010047-T1 ID=CBS51388_010047-T1|Name=CBS51388_010047-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5607bp|location=Sequence derived from alignment at An16:719515..721600+ (Aspergillus niger CBS 513.88)
ATGCCATCGGCCAACCCGCCAGCTGAGCGTCGCGACTCCACCCGCTCGGT
CATGTTGACGGACGTCCCCGCCCTCGGCGACTGCCCATTAGTAGACGACT
CGTCACTCTCGCACCGAAACAGCATCAGCACCACTGACGGCATATCTAAT
GATTCGCCCGCCTCGTGGGATGGCGACGCCCCCTCCGATAATTCTCCCTC
TGCCGAGGTCGACGTCAAGATTCAAGACGGCTTACACCATCCGTTTCCAA
CGACCGCAGACACCTCGCCGAAAACCTTCCGATTCAACGTGATCGCATCC
CACGGCATGGACGCTTCCATGGACGAGGTAACACCCAAGATCGAGGAGAT
AGATGATGTGGACGAGTTGCAGAGCATAAAACCGGTGGGAGTGGAGACAT
CGATGGCCAATGCGAGTTCTACCCATCCGGATTCCACGGCTGCTCCCGTC
AACGTCCCACGGAAACGTGGACGACCACGCAAACATCCGCTGCCAGCGCC
CGGGAATCAGATCAAAATCACCAAGGGTCGATCCAAAACGGGTTGTATCA
CTTGTCGCCGGCGGAAGAAGAAATGCGACGAGACCAAGCCAGCGTGTCTC
AACTGTCAGAAGAATGCCGTGGTATGCGAGGGCTACCCGCCAAAAGAAAT
ATGGAAGAGTGGTAAGCAGAAGCTTGAGGATGTTCGCACCCAGAACATGG
TTGCCCGCTCTCTACCTCTGCTTATCGACGGCATCGAAACCGAGATTGAC
CGGCGCTTCCTCGATCATTTCGTCTACGGCTTTAGTCGCGTTTTGACCCT
GATCAACGATGACTCCAACCCGTTCAAGGAGATCTTGCTCCCGATGGCCA
CTCAGCACCGGGGTTTGATGCACTCGCTCATGTGCCTCTCGGGATCGCAC
CTGTCGGGTCTCCATCATGTTCCAATGTTGGAGGAGCGAAAGTTCTATCA
TTACCACCGCGCTATCAGGGATCTCAAGGACAATATCACAGCGTCTTCAG
GTAATTCTGAGCAAGACCCTGAGCTTCTTATCGAAGATCCCATCATCGCA
TCCACAATTGCTCTCAGCTTGAACACCATCTGTGAAGGGGAAACCAAAGG
GGAATACAGACCCCACATGGATGCCGCCCGGTATTTGCTGTCGACACAGC
AACCGAGGAATGAGAAGTTCCGGCAGTTTATTGTCGAGTTCTTCCAGTAC
CATGATGTCTCCAACTCCATCACTTCGCTGGATCGCCGCCCCGCCCATCT
GCAGGGCGGCTTACGGCTGCCTGACTTTGTGCCACACGCGCAGGCAGGGA
TGTTCCTTGGAGTCTTTGATGGTCTATTCAATTATATCTCTGAGGTAACT
CGAATTCGTGACCGGATTCGACAGCGGTCCAATGAAGGATACGAGCCTGC
TGTTGACTACCAGATTCTGGGCGATGCCGTCTCCATCGACTCCGCCATTC
GAGCTTGGGAGACCTCGTATACGCCCAACACGCCAAACTACTACCTGGCG
CAACTATATCGCCAGTCCACCTGGGTCTACCTGTACCGCACCATCCGCCC
GTCCCGACCAAGCGAGAAAATTGCACAGGTTGTGGACGATGGACTTTCTT
TCCTGGATCAGCTGCCTCAGGATGCAGGCGCCTACAGTATTGTGCTGATG
CCACTGTTCCTCTTGGGCTGCTCTGCCTTCCTGCCCCGCCAGCGGGAGAG
GATCAAGAAGGGCTTTGAGACCCTCAAGGGCTACTCCAACCTCCGCAACA
TCGAACCCGCCTTCAAGGTCGTTGAGCGAGTGTGGGAAGTGATGGACACG
AAAATGGAAGAAAGTTGGGACTGGGAGAAGATCATCAGCGACATGAACAT
GGATTTCTTGATCACCTAGATGCCATCGGCCAACCCGCCAGCTGAGCGTC
GCGACTCCACCCGCTCGGTCATGTTGACGGACGTCCCCGCCCTCGGCGAC
TGCCCATTAGTAGACGACTCGTCACTCTCGCACCGAAACAGCATCAGCAC
CACTGACGGCATATCTAATGATTCGCCCGCCTCGTGGGATGGCGACGCCC
CCTCCGATAATTCTCCCTCTGCCGAGGTCGACGTCAAGATTCAAGACGGC
TTACACCATCCGTTTCCAACGACCGCAGACACCTCGCCGAAAACCTTCCG
ATTCAACGTGATCGCATCCCACGGCATGGACGCTTCCATGGACGAGGTAA
CACCCAAGATCGAGGAGATAGATGATGTGGACGAGTTGCAGAGCATAAAA
CCGGTGGGAGTGGAGACATCGATGGCCAATGCGAGTTCTACCCATCCGGA
TTCCACGGCTGCTCCCGTCAACGTCCCACGGAAACGTGGACGACCACGCA
AACATCCGCTGCCAGCGCCCGGGAATCAGATCAAAATCACCAAGGGTCGA
TCCAAAACGGGTTGTATCACTTGTCGCCGGCGGAAGAAGAAATGCGACGA
GACCAAGCCAGCGTGTCTCAACTGTCAGAAGAATGCCGTGGTATGCGAGG
GCTACCCGCCAAAAGAAATATGGAAGAGTGGTAAGCAGAAGCTTGAGGAT
GTTCGCACCCAGAACATGGTTGCCCGCTCTCTACCTCTGCTTATCGACGG
CATCGAAACCGAGATTGACCGGCGCTTCCTCGATCATTTCGTCTACGGCT
TTAGTCGCGTTTTGACCCTGATCAACGATGACTCCAACCCGTTCAAGGAG
ATCTTGCTCCCGATGGCCACTCAGCACCGGGGTTTGATGCACTCGCTCAT
GTGCCTCTCGGGATCGCACCTGTCGGGTCTCCATCATGTTCCAATGTTGG
AGGAGCGAAAGTTCTATCATTACCACCGCGCTATCAGGGATCTCAAGGAC
AATATCACAGCGTCTTCAGGTAATTCTGAGCAAGACCCTGAGCTTCTTAT
CGAAGATCCCATCATCGCATCCACAATTGCTCTCAGCTTGAACACCATCT
GTGAAGGGGAAACCAAAGGGGAATACAGACCCCACATGGATGCCGCCCGG
TATTTGCTGTCGACACAGCAACCGAGGAATGAGAAGTTCCGGCAGTTTAT
TGTCGAGTTCTTCCAGTACCATGATGTCTCCAACTCCATCACTTCGCTGG
ATCGCCGCCCCGCCCATCTGCAGGGCGGCTTACGGCTGCCTGACTTTGTG
CCACACGCGCAGGCAGGGATGTTCCTTGGAGTCTTTGATGGTCTATTCAA
TTATATCTCTGAGGTAACTCGAATTCGTGACCGGATTCGACAGCGGTCCA
ATGAAGGATACGAGCCTGCTGTTGACTACCAGATTCTGGGCGATGCCGTC
TCCATCGACTCCGCCATTCGAGCTTGGGAGACCTCGTATACGCCCAACAC
GCCAAACTACTACCTGGCGCAACTATATCGCCAGTCCACCTGGGTCTACC
TGTACCGCACCATCCGCCCGTCCCGACCAAGCGAGAAAATTGCACAGGTT
GTGGACGATGGACTTTCTTTCCTGGATCAGCTGCCTCAGGATGCAGGCGC
CTACAGTATTGTGCTGATGCCACTGTTCCTCTTGGGCTGCTCTGCCTTCC
TGCCCCGCCAGCGGGAGAGGATCAAGAAGGGCTTTGAGACCCTCAAGGGC
TACTCCAACCTCCGCAACATCGAACCCGCCTTCAAGGTCGTTGAGCGAGT
GTGGGAAGTGATGGACACGAAAATGGAAGAAAGTTGGGACTGGGAGAAGA
TCATCAGCGACATGAACATGGATTTCTTGATCACCTAGATGCCATCGGCC
AACCCGCCAGCTGAGCGTCGCGACTCCACCCGCTCGGTCATGTTGACGGA
CGTCCCCGCCCTCGGCGACTGCCCATTAGTAGACGACTCGTCACTCTCGC
ACCGAAACAGCATCAGCACCACTGACGGCATATCTAATGATTCGCCCGCC
TCGTGGGATGGCGACGCCCCCTCCGATAATTCTCCCTCTGCCGAGGTCGA
CGTCAAGATTCAAGACGGCTTACACCATCCGTTTCCAACGACCGCAGACA
CCTCGCCGAAAACCTTCCGATTCAACGTGATCGCATCCCACGGCATGGAC
GCTTCCATGGACGAGGTAACACCCAAGATCGAGGAGATAGATGATGTGGA
CGAGTTGCAGAGCATAAAACCGGTGGGAGTGGAGACATCGATGGCCAATG
CGAGTTCTACCCATCCGGATTCCACGGCTGCTCCCGTCAACGTCCCACGG
AAACGTGGACGACCACGCAAACATCCGCTGCCAGCGCCCGGGAATCAGAT
CAAAATCACCAAGGGTCGATCCAAAACGGGTTGTATCACTTGTCGCCGGC
GGAAGAAGAAATGCGACGAGACCAAGCCAGCGTGTCTCAACTGTCAGAAG
AATGCCGTGGTATGCGAGGGCTACCCGCCAAAAGAAATATGGAAGAGTGG
TAAGCAGAAGCTTGAGGATGTTCGCACCCAGAACATGGTTGCCCGCTCTC
TACCTCTGCTTATCGACGGCATCGAAACCGAGATTGACCGGCGCTTCCTC
GATCATTTCGTCTACGGCTTTAGTCGCGTTTTGACCCTGATCAACGATGA
CTCCAACCCGTTCAAGGAGATCTTGCTCCCGATGGCCACTCAGCACCGGG
GTTTGATGCACTCGCTCATGTGCCTCTCGGGATCGCACCTGTCGGGTCTC
CATCATGTTCCAATGTTGGAGGAGCGAAAGTTCTATCATTACCACCGCGC
TATCAGGGATCTCAAGGACAATATCACAGCGTCTTCAGGTAATTCTGAGC
AAGACCCTGAGCTTCTTATCGAAGATCCCATCATCGCATCCACAATTGCT
CTCAGCTTGAACACCATCTGTGAAGGGGAAACCAAAGGGGAATACAGACC
CCACATGGATGCCGCCCGGTATTTGCTGTCGACACAGCAACCGAGGAATG
AGAAGTTCCGGCAGTTTATTGTCGAGTTCTTCCAGTACCATGATGTCTCC
AACTCCATCACTTCGCTGGATCGCCGCCCCGCCCATCTGCAGGGCGGCTT
ACGGCTGCCTGACTTTGTGCCACACGCGCAGGCAGGGATGTTCCTTGGAG
TCTTTGATGGTCTATTCAATTATATCTCTGAGGTAACTCGAATTCGTGAC
CGGATTCGACAGCGGTCCAATGAAGGATACGAGCCTGCTGTTGACTACCA
GATTCTGGGCGATGCCGTCTCCATCGACTCCGCCATTCGAGCTTGGGAGA
CCTCGTATACGCCCAACACGCCAAACTACTACCTGGCGCAACTATATCGC
CAGTCCACCTGGGTCTACCTGTACCGCACCATCCGCCCGTCCCGACCAAG
CGAGAAAATTGCACAGGTTGTGGACGATGGACTTTCTTTCCTGGATCAGC
TGCCTCAGGATGCAGGCGCCTACAGTATTGTGCTGATGCCACTGTTCCTC
TTGGGCTGCTCTGCCTTCCTGCCCCGCCAGCGGGAGAGGATCAAGAAGGG
CTTTGAGACCCTCAAGGGCTACTCCAACCTCCGCAACATCGAACCCGCCT
TCAAGGTCGTTGAGCGAGTGTGGGAAGTGATGGACACGAAAATGGAAGAA
AGTTGGGACTGGGAGAAGATCATCAGCGACATGAACATGGATTTCTTGAT
CACCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:719515..721600 + |
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