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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:770431..772457+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010065-T1 ID=CBS51388_010065-T1|Name=CBS51388_010065-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2027bp|location=Sequence derived from alignment at An16:770431..772457+ (Aspergillus niger CBS 513.88)
ATGTCTTCATTCTTACCTGTGAATAATATTTCATCGCCGCCGGACCGCGT
CATGGAGGAGGCGACAACATCTTCCACACCACGCCCTCATGCCAAGCCCA
GCGCGGCGCCCCAAGATACGACTTCGTCCATGATCGCCGCCCATGACGAG
AGCACGCCTCGGAATATAAATAGCATCGAAGACTCACATCACCATGCCGA
TTCCCAGGGGAGTGCATCGCTGACCTCAGACGATGCCGTACACGGTGAGT
CGGACGAAGGATCTGAACATGAGGCGGAAAACAAGGGTGGCGCTCCACCT
TCGAAGAAGAAGAAGGGTCAGCGATTCTATTGCACAGACTTCCCACCCTG
TAACCTGAGTTTTACACGGAGTGAACATCTCGCTCGACATATCCGCAAAC
ATACCGGGGAACGTCCCTTTCAGTGTCACTGTTCACGTCGCTTTTCCCGC
CTCGACAATTTGCGACAGCATGCTCAGACGGTGCACGTCAACGAAGAAAT
CCCTGGAGACTCTCTTGCAGCCACTGGAACACGGTTCCAGCGTCAGATTC
GGACAGACCGTGTACGACCCCAGGGTCGAGCTAGAGCAGGAACCGCGGGC
AGTCAGGGAACCCATAGTCGAGGTCACAGTCGAAACCTTTCTGCCTCGAG
TATTACCTCAACTGCGTCCACCTTCAGTCAGCCCCAGGAGCTTCGTCGCC
GACCTCCACCCTTGATGATGGCGAATGATAGGGCGCGTCTGATGGAGCCG
ATGGATGCCCCTAGCACGCCACCAGCCCGCGGAATACCTGGCCCAGCAGC
CGGCGGATCTCCCTACACGCCGTCTCACCACATCTTCTCAGCGGGCGGCA
ACGGCAGTCCGCACGTGGCTTCCCCCATCTCTACTGCATCACAGGCCTCG
GGCTTCTGGGAAGGCAAAACTGCCGCCCGCCGTCTCTCCGTGCCTACGGG
TGCGAACCCATTTGCGTCGCAGCACGTCAATGCCTACCCACCGAACTACG
TTCCAACGCAAGCGTACGGTCCCCATGGAGGCGTCTACGCGAGCCCTGTC
AGCTCGTCATACTCACTCTCCCGCGACGAAACAAGTCACGGCGCTACCGA
TGCTGATCTCAGGAGAAGGACCTGGCATCCTTCAACCTGGTCCACGGTCC
CTCGGCCTGCTACGAGCGGCCTTAGCAACTACCAGACGCCAGAAGTGTTT
AAGCCATCTTTTGGCGCCAATGGATCAGCAGAGCAGCCACCGCGGCTGCC
AGGAATTGAGAGCTTTGATAAGGTAGTGGCTCAAAGACCCTTGACCCCGC
CCGTTCGGCGGTCGAGTCCGATGCAAATCGACAACCCTAACAAGCCTCCT
CCAAATTATAACATTGCCGGGGGTTACAACTACACACAGCCGGCCAAACG
ACCGGCACCGCCAATCTCGGGCCCTGGCCACCGACGGGGTCATGTCTCTT
GGGACATGTCATTGCACACGAACCTTACTGGCCTGCACATCAGAGACAAG
CCTCCACAGCGGGACGCATCGAACTGGAGCCAGCAGACTATTGCGGAGAT
TCACAATGTGGGATCTCGCCCCTCGTCTTCGTACCAGCCACAGTTCCACG
AGTACCGAGGACATGGGCATGCTCCCTCCTACAGCAATGCTACCTCGAGC
TCTCAGGCGACGCGAACTTCGCCCGAGGACTCGAGTAGCAGCGAAGGGGT
ACACACTCCTTCAACTGCGTCCCTTGAATACCACCCCGCCATTGTGCACA
ACAATGGATACGTGGAGCCGCACCACCCCCCGTTTTCATCCGATACTTCT
CATGCAGTACGCACCCGTTACCCGGAGTATCGCTGAGGGCCAAATCACTG
ATTGAACTGCAGGCCTGTCCCCCGCTTCCCCCACAGACCGATAGCTATCA
CGGCAAACATGATCCACGGTCCGAATTCCTGCCCCATACCGCCCGAGAGC
CTGGAATGGGCCGGCTGGAGGCACTGGTTGCCGTTGCCACGAGTGAAAAC
AAAAGTGCAGCGAAGCTGTTCCTGTGA back to topCoding sequence (CDS) from alignment at An16:770431..772457+ >CBS51388_010065-T1 ID=CBS51388_010065-T1|Name=CBS51388_010065-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3942bp|location=Sequence derived from alignment at An16:770431..772457+ (Aspergillus niger CBS 513.88)
ATGTCTTCATTCTTACCTGTGAATAATATTTCATCGCCGCCGGACCGCGT
CATGGAGGAGGCGACAACATCTTCCACACCACGCCCTCATGCCAAGCCCA
GCGCGGCGCCCCAAGATACGACTTCGTCCATGATCGCCGCCCATGACGAG
AGCACGCCTCGGAATATAAATAGCATCGAAGACTCACATCACCATGCCGA
TTCCCAGGGGAGTGCATCGCTGACCTCAGACGATGCCGTACACGGTGAGT
CGGACGAAGGATCTGAACATGAGGCGGAAAACAAGGGTGGCGCTCCACCT
TCGAAGAAGAAGAAGGGTCAGCGATTCTATTGCACAGACTTCCCACCCTG
TAACCTGAGTTTTACACGGAGTGAACATCTCGCTCGACATATCCGCAAAC
ATACCGGGGAACGTCCCTTTCAGTGTCACTGTTCACGTCGCTTTTCCCGC
CTCGACAATTTGCGACAGCATGCTCAGACGGTGCACGTCAACGAAGAAAT
CCCTGGAGACTCTCTTGCAGCCACTGGAACACGGTTCCAGCGTCAGATTC
GGACAGACCGTGTACGACCCCAGGGTCGAGCTAGAGCAGGAACCGCGGGC
AGTCAGGGAACCCATAGTCGAGGTCACAGTCGAAACCTTTCTGCCTCGAG
TATTACCTCAACTGCGTCCACCTTCAGTCAGCCCCAGGAGCTTCGTCGCC
GACCTCCACCCTTGATGATGGCGAATGATAGGGCGCGTCTGATGGAGCCG
ATGGATGCCCCTAGCACGCCACCAGCCCGCGGAATACCTGGCCCAGCAGC
CGGCGGATCTCCCTACACGCCGTCTCACCACATCTTCTCAGCGGGCGGCA
ACGGCAGTCCGCACGTGGCTTCCCCCATCTCTACTGCATCACAGGCCTCG
GGCTTCTGGGAAGGCAAAACTGCCGCCCGCCGTCTCTCCGTGCCTACGGG
TGCGAACCCATTTGCGTCGCAGCACGTCAATGCCTACCCACCGAACTACG
TTCCAACGCAAGCGTACGGTCCCCATGGAGGCGTCTACGCGAGCCCTGTC
AGCTCGTCATACTCACTCTCCCGCGACGAAACAAGTCACGGCGCTACCGA
TGCTGATCTCAGGAGAAGGACCTGGCATCCTTCAACCTGGTCCACGGTCC
CTCGGCCTGCTACGAGCGGCCTTAGCAACTACCAGACGCCAGAAGTGTTT
AAGCCATCTTTTGGCGCCAATGGATCAGCAGAGCAGCCACCGCGGCTGCC
AGGAATTGAGAGCTTTGATAAGGTAGTGGCTCAAAGACCCTTGACCCCGC
CCGTTCGGCGGTCGAGTCCGATGCAAATCGACAACCCTAACAAGCCTCCT
CCAAATTATAACATTGCCGGGGGTTACAACTACACACAGCCGGCCAAACG
ACCGGCACCGCCAATCTCGGGCCCTGGCCACCGACGGGGTCATGTCTCTT
GGGACATGTCATTGCACACGAACCTTACTGGCCTGCACATCAGAGACAAG
CCTCCACAGCGGGACGCATCGAACTGGAGCCAGCAGACTATTGCGGAGAT
TCACAATGTGGGATCTCGCCCCTCGTCTTCGTACCAGCCACAGTTCCACG
AGTACCGAGGACATGGGCATGCTCCCTCCTACAGCAATGCTACCTCGAGC
TCTCAGGCGACGCGAACTTCGCCCGAGGACTCGAGTAGCAGCGAAGGGGT
ACACACTCCTTCAACTGCGTCCCTTGAATACCACCCCGCCATTGTGCACA
ACAATGGATACGTGGAGCCGCACCACCCCCCGTTTTCATCCGATACTTCT
CATGCAGCCTGTCCCCCGCTTCCCCCACAGACCGATAGCTATCACGGCAA
ACATGATCCACGGTCCGAATTCCTGCCCCATACCGCCCGAGAGCCTGGAA
TGGGCCGGCTGGAGGCACTGGTTGCCGTTGCCACGAGTGAAAACAAAAGT
GCAGCGAAGCTGTTCCTGTGAATGTCTTCATTCTTACCTGTGAATAATAT
TTCATCGCCGCCGGACCGCGTCATGGAGGAGGCGACAACATCTTCCACAC
CACGCCCTCATGCCAAGCCCAGCGCGGCGCCCCAAGATACGACTTCGTCC
ATGATCGCCGCCCATGACGAGAGCACGCCTCGGAATATAAATAGCATCGA
AGACTCACATCACCATGCCGATTCCCAGGGGAGTGCATCGCTGACCTCAG
ACGATGCCGTACACGGTGAGTCGGACGAAGGATCTGAACATGAGGCGGAA
AACAAGGGTGGCGCTCCACCTTCGAAGAAGAAGAAGGGTCAGCGATTCTA
TTGCACAGACTTCCCACCCTGTAACCTGAGTTTTACACGGAGTGAACATC
TCGCTCGACATATCCGCAAACATACCGGGGAACGTCCCTTTCAGTGTCAC
TGTTCACGTCGCTTTTCCCGCCTCGACAATTTGCGACAGCATGCTCAGAC
GGTGCACGTCAACGAAGAAATCCCTGGAGACTCTCTTGCAGCCACTGGAA
CACGGTTCCAGCGTCAGATTCGGACAGACCGTGTACGACCCCAGGGTCGA
GCTAGAGCAGGAACCGCGGGCAGTCAGGGAACCCATAGTCGAGGTCACAG
TCGAAACCTTTCTGCCTCGAGTATTACCTCAACTGCGTCCACCTTCAGTC
AGCCCCAGGAGCTTCGTCGCCGACCTCCACCCTTGATGATGGCGAATGAT
AGGGCGCGTCTGATGGAGCCGATGGATGCCCCTAGCACGCCACCAGCCCG
CGGAATACCTGGCCCAGCAGCCGGCGGATCTCCCTACACGCCGTCTCACC
ACATCTTCTCAGCGGGCGGCAACGGCAGTCCGCACGTGGCTTCCCCCATC
TCTACTGCATCACAGGCCTCGGGCTTCTGGGAAGGCAAAACTGCCGCCCG
CCGTCTCTCCGTGCCTACGGGTGCGAACCCATTTGCGTCGCAGCACGTCA
ATGCCTACCCACCGAACTACGTTCCAACGCAAGCGTACGGTCCCCATGGA
GGCGTCTACGCGAGCCCTGTCAGCTCGTCATACTCACTCTCCCGCGACGA
AACAAGTCACGGCGCTACCGATGCTGATCTCAGGAGAAGGACCTGGCATC
CTTCAACCTGGTCCACGGTCCCTCGGCCTGCTACGAGCGGCCTTAGCAAC
TACCAGACGCCAGAAGTGTTTAAGCCATCTTTTGGCGCCAATGGATCAGC
AGAGCAGCCACCGCGGCTGCCAGGAATTGAGAGCTTTGATAAGGTAGTGG
CTCAAAGACCCTTGACCCCGCCCGTTCGGCGGTCGAGTCCGATGCAAATC
GACAACCCTAACAAGCCTCCTCCAAATTATAACATTGCCGGGGGTTACAA
CTACACACAGCCGGCCAAACGACCGGCACCGCCAATCTCGGGCCCTGGCC
ACCGACGGGGTCATGTCTCTTGGGACATGTCATTGCACACGAACCTTACT
GGCCTGCACATCAGAGACAAGCCTCCACAGCGGGACGCATCGAACTGGAG
CCAGCAGACTATTGCGGAGATTCACAATGTGGGATCTCGCCCCTCGTCTT
CGTACCAGCCACAGTTCCACGAGTACCGAGGACATGGGCATGCTCCCTCC
TACAGCAATGCTACCTCGAGCTCTCAGGCGACGCGAACTTCGCCCGAGGA
CTCGAGTAGCAGCGAAGGGGTACACACTCCTTCAACTGCGTCCCTTGAAT
ACCACCCCGCCATTGTGCACAACAATGGATACGTGGAGCCGCACCACCCC
CCGTTTTCATCCGATACTTCTCATGCAGCCTGTCCCCCGCTTCCCCCACA
GACCGATAGCTATCACGGCAAACATGATCCACGGTCCGAATTCCTGCCCC
ATACCGCCCGAGAGCCTGGAATGGGCCGGCTGGAGGCACTGGTTGCCGTT
GCCACGAGTGAAAACAAAAGTGCAGCGAAGCTGTTCCTGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| DBxref | PFAM:PF00096 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:770431..772457 + |
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