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CBS51388_010068-T1, CBS51388_010068-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010068-T1
Unique NameCBS51388_010068-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:777435..780343+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010068-T1 ID=CBS51388_010068-T1|Name=CBS51388_010068-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2909bp|location=Sequence derived from alignment at An16:777435..780343+ (Aspergillus niger CBS 513.88)
ATGTCATCTCGACCAGATCTCAAGGTAAGCTCTACCTGTTTTAGGAACTT
AAGAAGAGAAAAATCGGCTAACATTAAACTAATTACACTGTCTAGGTGGA
CGACGAAGTCGGCTTCATCCGCTTCTATCGTTCCATTTCCTCCTCCTCTG
ACAATGACAACAACAACAATGAGACCATTCGAGTTTTCGACCGCGGAGAC
TGGTACTCCGCCCACGGTGCCGAAGCTGAATTCATCGCCCGCACCGTCTA
CAAAACCACCTCTGTGATCCGCAATCTGGGCCGCAGCGACACAGGCGGCC
TGCCCTCCGTGACGATGAGCGTGACTGTATTCCGCAATTTCTTACGCGAG
GCGCTATTCCGACTCAATCGGCGAGTGGAGATCTGGGGCTCTGCGAGCGG
GCGCGGCGGACAGTGGAAGCTCATTAAGCAGGCGAGTCCGGGGAACTTGC
AGGATGTGGAAGAAGAACTGGGGAGTGTAGGTGGGCTGAATATTGAGGCT
GGAGCGCCGATCATTCTGGCTGTGAAGATTTCTGCAAAGGCCGGGGAGGC
GAGAAGTGTGGGGGTTTGTTTTGCGGATGCGAGTGTAAGGGAGTTGGGTG
TGAGTGAATTCTTGGATAATGATGTTTATTCGAATCTGGAGTCGCTGGTC
ATTCAGCTGGGGGTGAAGGAGTGTCTTGTGCAGATGGATGCGGGGAGGAA
GGATGTGGAATTGGGGAAGGTGAGGAATATCATGGATAGTTGTGGGATTG
CCGTGTCGGAGAGGCACAGCGGTGATTTCGGGGTTAGGGATATCGAGCAG
GACTTGACGAGGTTGTTGAGGGATGAGAGGTCTGCCGGGACGCTGCCTCA
GACTGAGTTGAAGTTGGCGATGGGATCCGCGGCGGCGTTGATCAAGTATC
TGGGTGTTATGACGGATCCGTCCAACTTCGGCCAGTATCGTCTCTATCAG
CATGATCTGTCGCAATTCATGAAGCTGGATTCGTCGGCGCTGAGGGCGTT
GAATCTCATGCCGGGTCCGCGGGACGGATCTAAGTCGATGAGTTTGTTTG
GGTTGCTGAATCATTGTAAGACGCCGGTGGGCAGCAGGCTGCTGGCGCAG
TGGTTGAAGCAGCCGCTAATGGATAAAGCTGAGATTGAGAAGAGACAGCA
GCTGGTGGAGTCGTTTGTGATGGACACGGAACTTCGGCAGACTATGCAGG
AGGAGCATTTGCGCTCGATCCCGGATTTGTATCGCTTGGCGAAGCGGTTT
CAGAGGAAGCAGGCGACACTGGAGGATGTCGTGCGTGTTTATCAGGTTGC
CATTCGCCTGCCAGGCTTTGTTGCGTCACTGGAGAATGTGATGGATGAAC
AGTATCAGACGCCTCTGGAAGCGGAGTATACGTCCAAGCTGCGCAGCCAT
TCCGATAACCTGGCAAAGCTGGAGGAGATGGTTGAGACGACGGTGGACTT
GGATGCATTGGAGAACCACGAGTTCATTATTAAGCCGGAGTTTGATGAGA
GCTTGCGCATCATTCGCAAGAAGCTGGATAAGCTGCGTCACGACATGGAC
TCGGAACACCGTCGTGTGGGCGGGGATCTGGACCAAGAAGTTGACAAGAA
GCTGTTCCTGGAGAATCATCGTGTGCATGGCTGGTGCTTCCGATTGACTC
GCAACGAGGCGGGCTGTATTCGCAACAAAAGAGAGTACCAGGAGTGCTCA
ACTCAGAAGAACGGTGTCTACTTTACGACCTCGACAATGCAGGCGCTCCG
TCGCGAGCACGACCAGCTGTCATCTAACTACAATCGCACTCAGACTGGTT
TGGTGAGCGAGGTTGTTGGTGTGGCTGCCTCCTACTGCCCTGTCCTTGAG
CAGCTTGCTGGCGTTTTGGCTCACCTCGATGTCATTGTGAGCTTCGCGCA
TTGTGCCGTGCACGCCCCTACACCATATGTCCGTCCCAAGATTCACCCGC
GTGGTACTGGAAACACGGTTCTGAAGGAGGCCCGGCATCCTTGTATGGAA
ATGCAGGATGACATCTCTTTTATCACCAACGACGTGTCGCTCATCCGTGA
TGAGTCTTCCTTCCTGATCATTACCGGTCCCAATATGGGTGGTAAATCGA
CCTACATCCGACAGATTGGCGTCATTGCGCTGATGGCCCAGACTGGATGC
TTCGTGCCATGCTCCGAGGCGGAGCTGACTATTTTCGACTGCATTCTTGC
TCGTGTTGGTGCGAGTGACTCGCAGCTCAAGGGTGTGTCGACTTTCATGG
CTGAGATGCTTGAGACCTCCAACATCCTCAAGTCCGCGACCTCGGAGTCA
TTGATCATCATCGATGAACTTGGTCGCGGAACAAGTACATACGATGGATT
CGGCCTTGCATGGGCTATCTCAGAGCACATCGTCACTGAGATTCGCTGTT
TCGGCCTGTTCGCAACCCACTTCCACGAATTGACGGCCCTGGCCGATCGG
TACCCGAAGTCAGCCAAGAACCTACATGTAGTGGCTTTTATTGGTGATGG
CACGGGCAATGAGGAGGACAGCAAAGACTCGAAGCGAGACCAGGTTACGT
TGCTGTACCGTGTCGAACCGGGCATCTGCGACCAGTCCTTCGGTATTCAC
GTTGCTGAATTGGTCCGCTTTCCGGAGAAGGTAGTCAACATGGCGCGACA
AAAGGCAGATGAGCTTGAGGACTTCACCTCCTCTGGGGCACAGGAAAAAG
AGTCCATGTCACTTGACAAGTACTCCCAGGAAGAAGTTGAAGAGGGCAGT
GCTCTCCTCAAGGATATGTTGCTGAAATGGAAGGAAGCTATTGAGGCACC
TGGCAAGGACCTGACGGTTGAAGAAAAGCGCCAGATCATGCGCGATCTTG
TCAACAGTGATCCGAAGTTACAGGCGAACAAAGTGTTCCAGGGCATCAAA
GCTTTGTAG
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Coding sequence (CDS) from alignment at An16:777435..780343+

>CBS51388_010068-T1 ID=CBS51388_010068-T1|Name=CBS51388_010068-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5676bp|location=Sequence derived from alignment at An16:777435..780343+ (Aspergillus niger CBS 513.88)
ATGTCATCTCGACCAGATCTCAAGGTGGACGACGAAGTCGGCTTCATCCG
CTTCTATCGTTCCATTTCCTCCTCCTCTGACAATGACAACAACAACAATG
AGACCATTCGAGTTTTCGACCGCGGAGACTGGTACTCCGCCCACGGTGCC
GAAGCTGAATTCATCGCCCGCACCGTCTACAAAACCACCTCTGTGATCCG
CAATCTGGGCCGCAGCGACACAGGCGGCCTGCCCTCCGTGACGATGAGCG
TGACTGTATTCCGCAATTTCTTACGCGAGGCGCTATTCCGACTCAATCGG
CGAGTGGAGATCTGGGGCTCTGCGAGCGGGCGCGGCGGACAGTGGAAGCT
CATTAAGCAGGCGAGTCCGGGGAACTTGCAGGATGTGGAAGAAGAACTGG
GGAGTGTAGGTGGGCTGAATATTGAGGCTGGAGCGCCGATCATTCTGGCT
GTGAAGATTTCTGCAAAGGCCGGGGAGGCGAGAAGTGTGGGGGTTTGTTT
TGCGGATGCGAGTGTAAGGGAGTTGGGTGTGAGTGAATTCTTGGATAATG
ATGTTTATTCGAATCTGGAGTCGCTGGTCATTCAGCTGGGGGTGAAGGAG
TGTCTTGTGCAGATGGATGCGGGGAGGAAGGATGTGGAATTGGGGAAGGT
GAGGAATATCATGGATAGTTGTGGGATTGCCGTGTCGGAGAGGCACAGCG
GTGATTTCGGGGTTAGGGATATCGAGCAGGACTTGACGAGGTTGTTGAGG
GATGAGAGGTCTGCCGGGACGCTGCCTCAGACTGAGTTGAAGTTGGCGAT
GGGATCCGCGGCGGCGTTGATCAAGTATCTGGGTGTTATGACGGATCCGT
CCAACTTCGGCCAGTATCGTCTCTATCAGCATGATCTGTCGCAATTCATG
AAGCTGGATTCGTCGGCGCTGAGGGCGTTGAATCTCATGCCGGGTCCGCG
GGACGGATCTAAGTCGATGAGTTTGTTTGGGTTGCTGAATCATTGTAAGA
CGCCGGTGGGCAGCAGGCTGCTGGCGCAGTGGTTGAAGCAGCCGCTAATG
GATAAAGCTGAGATTGAGAAGAGACAGCAGCTGGTGGAGTCGTTTGTGAT
GGACACGGAACTTCGGCAGACTATGCAGGAGGAGCATTTGCGCTCGATCC
CGGATTTGTATCGCTTGGCGAAGCGGTTTCAGAGGAAGCAGGCGACACTG
GAGGATGTCGTGCGTGTTTATCAGGTTGCCATTCGCCTGCCAGGCTTTGT
TGCGTCACTGGAGAATGTGATGGATGAACAGTATCAGACGCCTCTGGAAG
CGGAGTATACGTCCAAGCTGCGCAGCCATTCCGATAACCTGGCAAAGCTG
GAGGAGATGGTTGAGACGACGGTGGACTTGGATGCATTGGAGAACCACGA
GTTCATTATTAAGCCGGAGTTTGATGAGAGCTTGCGCATCATTCGCAAGA
AGCTGGATAAGCTGCGTCACGACATGGACTCGGAACACCGTCGTGTGGGC
GGGGATCTGGACCAAGAAGTTGACAAGAAGCTGTTCCTGGAGAATCATCG
TGTGCATGGCTGGTGCTTCCGATTGACTCGCAACGAGGCGGGCTGTATTC
GCAACAAAAGAGAGTACCAGGAGTGCTCAACTCAGAAGAACGGTGTCTAC
TTTACGACCTCGACAATGCAGGCGCTCCGTCGCGAGCACGACCAGCTGTC
ATCTAACTACAATCGCACTCAGACTGGTTTGGTGAGCGAGGTTGTTGGTG
TGGCTGCCTCCTACTGCCCTGTCCTTGAGCAGCTTGCTGGCGTTTTGGCT
CACCTCGATGTCATTGTGAGCTTCGCGCATTGTGCCGTGCACGCCCCTAC
ACCATATGTCCGTCCCAAGATTCACCCGCGTGGTACTGGAAACACGGTTC
TGAAGGAGGCCCGGCATCCTTGTATGGAAATGCAGGATGACATCTCTTTT
ATCACCAACGACGTGTCGCTCATCCGTGATGAGTCTTCCTTCCTGATCAT
TACCGGTCCCAATATGGGTGGTAAATCGACCTACATCCGACAGATTGGCG
TCATTGCGCTGATGGCCCAGACTGGATGCTTCGTGCCATGCTCCGAGGCG
GAGCTGACTATTTTCGACTGCATTCTTGCTCGTGTTGGTGCGAGTGACTC
GCAGCTCAAGGGTGTGTCGACTTTCATGGCTGAGATGCTTGAGACCTCCA
ACATCCTCAAGTCCGCGACCTCGGAGTCATTGATCATCATCGATGAACTT
GGTCGCGGAACAAGTACATACGATGGATTCGGCCTTGCATGGGCTATCTC
AGAGCACATCGTCACTGAGATTCGCTGTTTCGGCCTGTTCGCAACCCACT
TCCACGAATTGACGGCCCTGGCCGATCGGTACCCGAAGTCAGCCAAGAAC
CTACATGTAGTGGCTTTTATTGGTGATGGCACGGGCAATGAGGAGGACAG
CAAAGACTCGAAGCGAGACCAGGTTACGTTGCTGTACCGTGTCGAACCGG
GCATCTGCGACCAGTCCTTCGGTATTCACGTTGCTGAATTGGTCCGCTTT
CCGGAGAAGGTAGTCAACATGGCGCGACAAAAGGCAGATGAGCTTGAGGA
CTTCACCTCCTCTGGGGCACAGGAAAAAGAGTCCATGTCACTTGACAAGT
ACTCCCAGGAAGAAGTTGAAGAGGGCAGTGCTCTCCTCAAGGATATGTTG
CTGAAATGGAAGGAAGCTATTGAGGCACCTGGCAAGGACCTGACGGTTGA
AGAAAAGCGCCAGATCATGCGCGATCTTGTCAACAGTGATCCGAAGTTAC
AGGCGAACAAAGTGTTCCAGGGCATCAAAGCTTTGTAGATGTCATCTCGA
CCAGATCTCAAGGTGGACGACGAAGTCGGCTTCATCCGCTTCTATCGTTC
CATTTCCTCCTCCTCTGACAATGACAACAACAACAATGAGACCATTCGAG
TTTTCGACCGCGGAGACTGGTACTCCGCCCACGGTGCCGAAGCTGAATTC
ATCGCCCGCACCGTCTACAAAACCACCTCTGTGATCCGCAATCTGGGCCG
CAGCGACACAGGCGGCCTGCCCTCCGTGACGATGAGCGTGACTGTATTCC
GCAATTTCTTACGCGAGGCGCTATTCCGACTCAATCGGCGAGTGGAGATC
TGGGGCTCTGCGAGCGGGCGCGGCGGACAGTGGAAGCTCATTAAGCAGGC
GAGTCCGGGGAACTTGCAGGATGTGGAAGAAGAACTGGGGAGTGTAGGTG
GGCTGAATATTGAGGCTGGAGCGCCGATCATTCTGGCTGTGAAGATTTCT
GCAAAGGCCGGGGAGGCGAGAAGTGTGGGGGTTTGTTTTGCGGATGCGAG
TGTAAGGGAGTTGGGTGTGAGTGAATTCTTGGATAATGATGTTTATTCGA
ATCTGGAGTCGCTGGTCATTCAGCTGGGGGTGAAGGAGTGTCTTGTGCAG
ATGGATGCGGGGAGGAAGGATGTGGAATTGGGGAAGGTGAGGAATATCAT
GGATAGTTGTGGGATTGCCGTGTCGGAGAGGCACAGCGGTGATTTCGGGG
TTAGGGATATCGAGCAGGACTTGACGAGGTTGTTGAGGGATGAGAGGTCT
GCCGGGACGCTGCCTCAGACTGAGTTGAAGTTGGCGATGGGATCCGCGGC
GGCGTTGATCAAGTATCTGGGTGTTATGACGGATCCGTCCAACTTCGGCC
AGTATCGTCTCTATCAGCATGATCTGTCGCAATTCATGAAGCTGGATTCG
TCGGCGCTGAGGGCGTTGAATCTCATGCCGGGTCCGCGGGACGGATCTAA
GTCGATGAGTTTGTTTGGGTTGCTGAATCATTGTAAGACGCCGGTGGGCA
GCAGGCTGCTGGCGCAGTGGTTGAAGCAGCCGCTAATGGATAAAGCTGAG
ATTGAGAAGAGACAGCAGCTGGTGGAGTCGTTTGTGATGGACACGGAACT
TCGGCAGACTATGCAGGAGGAGCATTTGCGCTCGATCCCGGATTTGTATC
GCTTGGCGAAGCGGTTTCAGAGGAAGCAGGCGACACTGGAGGATGTCGTG
CGTGTTTATCAGGTTGCCATTCGCCTGCCAGGCTTTGTTGCGTCACTGGA
GAATGTGATGGATGAACAGTATCAGACGCCTCTGGAAGCGGAGTATACGT
CCAAGCTGCGCAGCCATTCCGATAACCTGGCAAAGCTGGAGGAGATGGTT
GAGACGACGGTGGACTTGGATGCATTGGAGAACCACGAGTTCATTATTAA
GCCGGAGTTTGATGAGAGCTTGCGCATCATTCGCAAGAAGCTGGATAAGC
TGCGTCACGACATGGACTCGGAACACCGTCGTGTGGGCGGGGATCTGGAC
CAAGAAGTTGACAAGAAGCTGTTCCTGGAGAATCATCGTGTGCATGGCTG
GTGCTTCCGATTGACTCGCAACGAGGCGGGCTGTATTCGCAACAAAAGAG
AGTACCAGGAGTGCTCAACTCAGAAGAACGGTGTCTACTTTACGACCTCG
ACAATGCAGGCGCTCCGTCGCGAGCACGACCAGCTGTCATCTAACTACAA
TCGCACTCAGACTGGTTTGGTGAGCGAGGTTGTTGGTGTGGCTGCCTCCT
ACTGCCCTGTCCTTGAGCAGCTTGCTGGCGTTTTGGCTCACCTCGATGTC
ATTGTGAGCTTCGCGCATTGTGCCGTGCACGCCCCTACACCATATGTCCG
TCCCAAGATTCACCCGCGTGGTACTGGAAACACGGTTCTGAAGGAGGCCC
GGCATCCTTGTATGGAAATGCAGGATGACATCTCTTTTATCACCAACGAC
GTGTCGCTCATCCGTGATGAGTCTTCCTTCCTGATCATTACCGGTCCCAA
TATGGGTGGTAAATCGACCTACATCCGACAGATTGGCGTCATTGCGCTGA
TGGCCCAGACTGGATGCTTCGTGCCATGCTCCGAGGCGGAGCTGACTATT
TTCGACTGCATTCTTGCTCGTGTTGGTGCGAGTGACTCGCAGCTCAAGGG
TGTGTCGACTTTCATGGCTGAGATGCTTGAGACCTCCAACATCCTCAAGT
CCGCGACCTCGGAGTCATTGATCATCATCGATGAACTTGGTCGCGGAACA
AGTACATACGATGGATTCGGCCTTGCATGGGCTATCTCAGAGCACATCGT
CACTGAGATTCGCTGTTTCGGCCTGTTCGCAACCCACTTCCACGAATTGA
CGGCCCTGGCCGATCGGTACCCGAAGTCAGCCAAGAACCTACATGTAGTG
GCTTTTATTGGTGATGGCACGGGCAATGAGGAGGACAGCAAAGACTCGAA
GCGAGACCAGGTTACGTTGCTGTACCGTGTCGAACCGGGCATCTGCGACC
AGTCCTTCGGTATTCACGTTGCTGAATTGGTCCGCTTTCCGGAGAAGGTA
GTCAACATGGCGCGACAAAAGGCAGATGAGCTTGAGGACTTCACCTCCTC
TGGGGCACAGGAAAAAGAGTCCATGTCACTTGACAAGTACTCCCAGGAAG
AAGTTGAAGAGGGCAGTGCTCTCCTCAAGGATATGTTGCTGAAATGGAAG
GAAGCTATTGAGGCACCTGGCAAGGACCTGACGGTTGAAGAAAAGCGCCA
GATCATGCGCGATCTTGTCAACAGTGATCCGAAGTTACAGGCGAACAAAG
TGTTCCAGGGCATCAAAGCTTTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006298mismatch repair
Vocabulary: Molecular Function
TermDefinition
GO:0030983mismatched DNA binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MSH2CBS51388_010068Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010068-T1.exon1CBS51388_010068-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010068-T1.exon2CBS51388_010068-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010068-T1.cdsCBS51388_010068-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010068-T1CBS51388_010068-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09260EPQ
DBxrefInterPro:IPR036187
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR007861
DBxrefInterPro:IPR036678
DBxrefInterPro:IPR016151
DBxrefInterPro:IPR011184
DBxrefInterPro:IPR007860
DBxrefInterPro:IPR007695
DBxrefInterPro:IPR000432
DBxrefInterPro:IPR007696
DBxrefPFAM:PF00488
DBxrefPFAM:PF05190
DBxrefPFAM:PF05192
DBxrefPFAM:PF05188
DBxrefPFAM:PF01624
ProductMutS-like protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:777435..780343 +
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