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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:813488..814883- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010080-T1 ID=CBS51388_010080-T1|Name=CBS51388_010080-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1396bp|location=Sequence derived from alignment at An16:813488..814883- (Aspergillus niger CBS 513.88)
ATGAATTCCACCCTTCCTTCTTGGAAGGATCGCACGCAGAATCAGTTCGG
CAAGCTTCAGATCCAGGTACCATGGCGGTCGATCCAGCTCCTCGTCCCGC
ATCGCATGCGACGGAAGATTCGCTCCAAGCTTCGCAGCAGGCTCTCTCCA
ACATCTTCGATATCGTCTCTGCAAACGTCCTTTTCGCCTATGGATACGCT
CCGATCACTCCAAAGCCATCGTTGGACGTTGTATGACTTTCAATACTTGC
TCCTGCTGATCCTCCTGATCTTCTCCCTCAGTGTGATGGGATCTCCTGGG
CCTTTGGGGAAGACGGCAATGTTTACCCTACTTCTCCTTTCTCTCCTGCT
CCCGATTACTCGCCAATTTTTCTTGCCGTTCCTTCCAATTGCGGGGTGGC
TCATCTTCTTCTACGCCTGCCAGTAAGTGAACCACCCTCTCAGATCGCAG
TCTGCTCGATTTCGAGAGAACTTTGGGAACTGACGCTTTTTGAATCAGAT
TCGTTCCAAGCGATTGGCGCCCGGCAATCTGGGTCCGCGTGCTTCCGGCC
CTAGAAAACATCCTCTACGGAGCGAACATCAGCAACATTCTGTCTGCTCA
TCAGAACGTTGTCTTGGACGTGCTGGCGTGGCTGCCTTATGGCATCTGTC
ACTATGGCGCGCCATTTGTCTGCTCCCTCATCATGTTCATTTTCGGTCCT
CCCGGCACGACTCCCCTCTTTGCACGGACTTTCGGTTACATCAGCATGAC
TGCTGTCGCCATCCAGCTGTTTTTCCCCTGCTCGCCTCCGTGGTACGAGA
ACCTTTACGGGCTGGCACCGGCCGACTACTCCATGCCGGGTAACCCCGCG
GGTCTTGCTCGCATCGACAAGCTTTTCGGCATCGACCTGTACACCTCGGG
CTTCAGACAGTCCCCTGTCGTGTTTGGTGCTTTCCCCTCTCTGCACGCTG
CGGATTCGACACTGGCCGCTTTGTTCATGAGCCATGTTTTCCCGCGGCTG
AAGCCCTTGTTCGTCACTTACACCCTGTGGATGTGGTGGGCAACCATGTA
CCTGTCGCACCACTATGCAGTGGATCTGGTCGGTGGTGGCCTCCTGGCCA
CGGTTGCATTCTACTTCGCCAAGACCCGATTCCTCCCGCGCGTCCAGAGC
GACAAGACTTTCCGCTGGGACTACGACTATGTGGAGATCGGAGACTCTGC
TCGCGAATATGGCTACGACTTGGCAGCCTACGACGGCGACTTCAACCTTG
ACAGCGATGAGTGGACGGTTGGATCATCATCCTCCATCTCTTCCGGCTCT
CTGAGCCCGGTGGACGATCACTACACCTGGGAAGGAGAGTCTTTGGCTTC
GCCCATTGCCGATGTCGAGTCTGGAAGACATGTGCTCAGTGCCTAA back to topCoding sequence (CDS) from alignment at An16:813488..814883- >CBS51388_010080-T1 ID=CBS51388_010080-T1|Name=CBS51388_010080-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2640bp|location=Sequence derived from alignment at An16:813488..814883- (Aspergillus niger CBS 513.88)
ATTCGTTCCAAGCGATTGGCGCCCGGCAATCTGGGTCCGCGTGCTTCCGG
CCCTAGAAAACATCCTCTACGGAGCGAACATCAGCAACATTCTGTCTGCT
CATCAGAACGTTGTCTTGGACGTGCTGGCGTGGCTGCCTTATGGCATCTG
TCACTATGGCGCGCCATTTGTCTGCTCCCTCATCATGTTCATTTTCGGTC
CTCCCGGCACGACTCCCCTCTTTGCACGGACTTTCGGTTACATCAGCATG
ACTGCTGTCGCCATCCAGCTGTTTTTCCCCTGCTCGCCTCCGTGGTACGA
GAACCTTTACGGGCTGGCACCGGCCGACTACTCCATGCCGGGTAACCCCG
CGGGTCTTGCTCGCATCGACAAGCTTTTCGGCATCGACCTGTACACCTCG
GGCTTCAGACAGTCCCCTGTCGTGTTTGGTGCTTTCCCCTCTCTGCACGC
TGCGGATTCGACACTGGCCGCTTTGTTCATGAGCCATGTTTTCCCGCGGC
TGAAGCCCTTGTTCGTCACTTACACCCTGTGGATGTGGTGGGCAACCATG
TACCTGTCGCACCACTATGCAGTGGATCTGGTCGGTGGTGGCCTCCTGGC
CACGGTTGCATTCTACTTCGCCAAGACCCGATTCCTCCCGCGCGTCCAGA
GCGACAAGACTTTCCGCTGGGACTACGACTATGTGGAGATCGGAGACTCT
GCTCGCGAATATGGCTACGACTTGGCAGCCTACGACGGCGACTTCAACCT
TGACAGCGATGAGTGGACGGTTGGATCATCATCCTCCATCTCTTCCGGCT
CTCTGAGCCCGGTGGACGATCACTACACCTGGGAAGGAGAGTCTTTGGCT
TCGCCCATTGCCGATGTCGAGTCTGGAAGACATGTGCTCAGTGCCTAAAT
GAATTCCACCCTTCCTTCTTGGAAGGATCGCACGCAGAATCAGTTCGGCA
AGCTTCAGATCCAGGTACCATGGCGGTCGATCCAGCTCCTCGTCCCGCAT
CGCATGCGACGGAAGATTCGCTCCAAGCTTCGCAGCAGGCTCTCTCCAAC
ATCTTCGATATCGTCTCTGCAAACGTCCTTTTCGCCTATGGATACGCTCC
GATCACTCCAAAGCCATCGTTGGACGTTGTATGACTTTCAATACTTGCTC
CTGCTGATCCTCCTGATCTTCTCCCTCAGTGTGATGGGATCTCCTGGGCC
TTTGGGGAAGACGGCAATGTTTACCCTACTTCTCCTTTCTCTCCTGCTCC
CGATTACTCGCCAATTTTTCTTGCCGTTCCTTCCAATTGCGGGGTGGCTC
ATCTTCTTCTACGCCTGCCAATTCGTTCCAAGCGATTGGCGCCCGGCAAT
CTGGGTCCGCGTGCTTCCGGCCCTAGAAAACATCCTCTACGGAGCGAACA
TCAGCAACATTCTGTCTGCTCATCAGAACGTTGTCTTGGACGTGCTGGCG
TGGCTGCCTTATGGCATCTGTCACTATGGCGCGCCATTTGTCTGCTCCCT
CATCATGTTCATTTTCGGTCCTCCCGGCACGACTCCCCTCTTTGCACGGA
CTTTCGGTTACATCAGCATGACTGCTGTCGCCATCCAGCTGTTTTTCCCC
TGCTCGCCTCCGTGGTACGAGAACCTTTACGGGCTGGCACCGGCCGACTA
CTCCATGCCGGGTAACCCCGCGGGTCTTGCTCGCATCGACAAGCTTTTCG
GCATCGACCTGTACACCTCGGGCTTCAGACAGTCCCCTGTCGTGTTTGGT
GCTTTCCCCTCTCTGCACGCTGCGGATTCGACACTGGCCGCTTTGTTCAT
GAGCCATGTTTTCCCGCGGCTGAAGCCCTTGTTCGTCACTTACACCCTGT
GGATGTGGTGGGCAACCATGTACCTGTCGCACCACTATGCAGTGGATCTG
GTCGGTGGTGGCCTCCTGGCCACGGTTGCATTCTACTTCGCCAAGACCCG
ATTCCTCCCGCGCGTCCAGAGCGACAAGACTTTCCGCTGGGACTACGACT
ATGTGGAGATCGGAGACTCTGCTCGCGAATATGGCTACGACTTGGCAGCC
TACGACGGCGACTTCAACCTTGACAGCGATGAGTGGACGGTTGGATCATC
ATCCTCCATCTCTTCCGGCTCTCTGAGCCCGGTGGACGATCACTACACCT
GGGAAGGAGAGTCTTTGGCTTCGCCCATTGCCGATGTCGAGTCTGGAAGA
CATGTGCTCAGTGCCTAAATGAATTCCACCCTTCCTTCTTGGAAGGATCG
CACGCAGAATCAGTTCGGCAAGCTTCAGATCCAGGTACCATGGCGGTCGA
TCCAGCTCCTCGTCCCGCATCGCATGCGACGGAAGATTCGCTCCAAGCTT
CGCAGCAGGCTCTCTCCAACATCTTCGATATCGTCTCTGCAAACGTCCTT
TTCGCCTATGGATACGCTCCGATCACTCCAAAGCCATCGTTGGACGTTGT
ATGACTTTCAATACTTGCTCCTGCTGATCCTCCTGATCTTCTCCCTCAGT
GTGATGGGATCTCCTGGGCCTTTGGGGAAGACGGCAATGTTTACCCTACT
TCTCCTTTCTCTCCTGCTCCCGATTACTCGCCAATTTTTCTTGCCGTTCC
TTCCAATTGCGGGGTGGCTCATCTTCTTCTACGCCTGCCA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR026841 |
| DBxref | InterPro:IPR000326 |
| DBxref | PFAM:PF14378 |
| DBxref | PFAM:PF01569 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:813488..814883 - |
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