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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:820881..821840- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010081-T1 ID=CBS51388_010081-T1|Name=CBS51388_010081-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=960bp|location=Sequence derived from alignment at An16:820881..821840- (Aspergillus niger CBS 513.88)
ATGTCGATCTCTTCTCTTCGAGGCCTTCTTACCAACTACTCCCCCGTTTC
AGAGGAATTCACTCAACCCGATCTGGAAAAGGAGTTGCATGTTTCCCTTC
GAAATGGCGACGACAGCGAGTCCTCCTCATCCCGGTCAGTCTGCCGGGAA
AAAGCGGAGAAGAAGGAGTCCAAAATCGTTGACGGACGTATCGTCTCCGA
CGCTATCATCGGTCTCTCCGACGGCATGACGGTTCCATTTGCCCTGACCG
CAGGCTTATCTGCTCTGGGAGACACCAAAGTCGTGGTTTTTGGCGGCATG
GCCGAACTCATTGCAGGAGCCATCTCCATGGGCTTGGGAGGCTACTTGGG
TGCAAAGAGCGAAGAGTGAGTGGTTTTCAAACTTCCCCAAGTATACAAAA
TTAGCAAAAGAAATATGCTGACCAGTTTTAGGGAGTCCTACCGCGCAACC
CTGAAGGAAACAAAGCAAGAGATTCTAACCGACCCCGCATCGGTGACTGA
GACGATCTCGGATGTCTTTGCGCCCTATGACCTCCCCGCAGAGCTGGTGG
GAGAGCTCACGCGACACCTCTCCTCATCCCCTAACCTCCCCTCCTTCCTC
ATGAACTTCCATCACACCGTCCAGGAACCCTCTGGCTCTCGTGCCTTTAT
CTGCGCCTTGACCATTGCATTGGGATACTTCATCGGTGGCTTCGTGCCGC
TCCTCCCCTACTTCTTCGTTGGTCCTCATGATGTACTCTCTGCCCTGCGC
TGGTCAATCGCCACGATGGCCGTTGCTTTGTTCTTGTTCGGTTACGGCAA
GACATGCTTCGTCAGCGGATGGAAAGGATATCGGAACATCAGACGCGGTG
TCATTGGCGGCTTACAGATGGTTCTAGTCGGAGGCGTTGCAGCAGGCTCT
GCAATGGGGCTGGTGAAGGGGTTCCAGATGCTGGCTGACTCTCATAGTCA
TGAGCATTAG back to topCoding sequence (CDS) from alignment at An16:820881..821840- >CBS51388_010081-T1 ID=CBS51388_010081-T1|Name=CBS51388_010081-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1788bp|location=Sequence derived from alignment at An16:820881..821840- (Aspergillus niger CBS 513.88)
GGAGTCCTACCGCGCAACCCTGAAGGAAACAAAGCAAGAGATTCTAACCG
ACCCCGCATCGGTGACTGAGACGATCTCGGATGTCTTTGCGCCCTATGAC
CTCCCCGCAGAGCTGGTGGGAGAGCTCACGCGACACCTCTCCTCATCCCC
TAACCTCCCCTCCTTCCTCATGAACTTCCATCACACCGTCCAGGAACCCT
CTGGCTCTCGTGCCTTTATCTGCGCCTTGACCATTGCATTGGGATACTTC
ATCGGTGGCTTCGTGCCGCTCCTCCCCTACTTCTTCGTTGGTCCTCATGA
TGTACTCTCTGCCCTGCGCTGGTCAATCGCCACGATGGCCGTTGCTTTGT
TCTTGTTCGGTTACGGCAAGACATGCTTCGTCAGCGGATGGAAAGGATAT
CGGAACATCAGACGCGGTGTCATTGGCGGCTTACAGATGGTTCTAGTCGG
AGGCGTTGCAGCAGGCTCTGCAATGGGGCTGGTGAAGGGGTTCCAGATGC
TGGCTGACTCTCATAGTCATGAGCATTAGATGTCGATCTCTTCTCTTCGA
GGCCTTCTTACCAACTACTCCCCCGTTTCAGAGGAATTCACTCAACCCGA
TCTGGAAAAGGAGTTGCATGTTTCCCTTCGAAATGGCGACGACAGCGAGT
CCTCCTCATCCCGGTCAGTCTGCCGGGAAAAAGCGGAGAAGAAGGAGTCC
AAAATCGTTGACGGACGTATCGTCTCCGACGCTATCATCGGTCTCTCCGA
CGGCATGACGGTTCCATTTGCCCTGACCGCAGGCTTATCTGCTCTGGGAG
ACACCAAAGTCGTGGTTTTTGGCGGCATGGCCGAACTCATTGCAGGAGCC
ATCTCCATGGGCTTGGGAGGCTACTTGGGTGCAAAGAGCGAAGAGGAGTC
CTACCGCGCAACCCTGAAGGAAACAAAGCAAGAGATTCTAACCGACCCCG
CATCGGTGACTGAGACGATCTCGGATGTCTTTGCGCCCTATGACCTCCCC
GCAGAGCTGGTGGGAGAGCTCACGCGACACCTCTCCTCATCCCCTAACCT
CCCCTCCTTCCTCATGAACTTCCATCACACCGTCCAGGAACCCTCTGGCT
CTCGTGCCTTTATCTGCGCCTTGACCATTGCATTGGGATACTTCATCGGT
GGCTTCGTGCCGCTCCTCCCCTACTTCTTCGTTGGTCCTCATGATGTACT
CTCTGCCCTGCGCTGGTCAATCGCCACGATGGCCGTTGCTTTGTTCTTGT
TCGGTTACGGCAAGACATGCTTCGTCAGCGGATGGAAAGGATATCGGAAC
ATCAGACGCGGTGTCATTGGCGGCTTACAGATGGTTCTAGTCGGAGGCGT
TGCAGCAGGCTCTGCAATGGGGCTGGTGAAGGGGTTCCAGATGCTGGCTG
ACTCTCATAGTCATGAGCATTAGATGTCGATCTCTTCTCTTCGAGGCCTT
CTTACCAACTACTCCCCCGTTTCAGAGGAATTCACTCAACCCGATCTGGA
AAAGGAGTTGCATGTTTCCCTTCGAAATGGCGACGACAGCGAGTCCTCCT
CATCCCGGTCAGTCTGCCGGGAAAAAGCGGAGAAGAAGGAGTCCAAAATC
GTTGACGGACGTATCGTCTCCGACGCTATCATCGGTCTCTCCGACGGCAT
GACGGTTCCATTTGCCCTGACCGCAGGCTTATCTGCTCTGGGAGACACCA
AAGTCGTGGTTTTTGGCGGCATGGCCGAACTCATTGCAGGAGCCATCTCC
ATGGGCTTGGGAGGCTACTTGGGTGCAAAGAGCGAAGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0030026 | cellular manganese ion homeostasis |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005384 | manganese ion transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008217 |
| DBxref | PFAM:PF01988 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:820881..821840 - |
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