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CBS51388_010093-T1, CBS51388_010093-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010093-T1
Unique NameCBS51388_010093-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:859894..862020+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010093-T1 ID=CBS51388_010093-T1|Name=CBS51388_010093-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2127bp|location=Sequence derived from alignment at An16:859894..862020+ (Aspergillus niger CBS 513.88)
ATGCACCCGGCTCCCGCGACGACGGACCGGCGACGCAGCTGTCGCTTTTG
CCGCAGTCGCAAGCTCCGCTGCTCAGGCGCCAGCGTCTGCAGCGCCTGCA
AGGACCGCCAGATCGAATGTGTCTATGATCAGGGCGGCCCCAAAGGTCGT
CCCCGGGTCTCTGGCGCGCGCACCACCGGCCGTCTGGTTGCTGGCCAGCC
GGCGCCCGAGCCCGACATGAAACAGGCTCCCTGGACATCCCCCTCGAGTC
CGTCGTCCTCCGCGGCCGGCCAGCTCTTTTCGCCGCGTCTTAAGAGTGTT
GCCGATGCTCTATCCGAGGTGACGGCCGAGATTCAGGAGAAGCTACAGGG
TCCAAGGGTCGATGGGATGCCATGGAGCCAGGCCGGTTCTCCTCGCCAGC
GGCCGGCTAAACTGGGCTGTCGCGAGCTTATCCTGGTGCTGACCCAGGAT
ATCATCGACGCCACAGTGGCCCGTTTCAGCGGACTCGATTGCCTTGCTTT
CTTCGCTAATCAAAGTCAATTCTTCCGAGCCAGCCTGGCGTCCAGCAGTC
CTCCCGAACCGTCCCCCGCCCTCGAGCCGGCGCCGCTGGCGGCATACAAC
GGCTACCGCATCACCCAGCTCTTAGATGTGTGGTTTGGTGCGCACCCGTT
GTCCATGGCCCTTTCAAAGACGCTGCTGCTACGTGACGTCCGCAGCAACT
CCTACGACCCCCTGCTCCTGGCTGTCGTGCTAGGGGGCGGTCTGCTGGAA
CTGGGGGATACGGACACCCAGGTGGAATCCGAGCAGCTCCTGCACTGGGC
GTCGTCACGCCTACAGTATATTTCCACGGCGGCAGCCGACCTGTCAACTG
CACAGGCGCTCAGCTTGCTGGCCTGGCATGAGACATGTCAGGGAAACATT
ATCAAAGCAATGACCTACAGCATCTACGCGAATCGTACCGTAACCCGCCT
CATCATGGACACCTTGACCCGGTCCTCACGCGATGTCCGACAGATCAACG
GGGTCGACCTAGTGCAGATTGAGTTGGAGATGATGCACATCCTGGGTTGG
ATGACTCTCGCGCTGATGGTCTGGTATTTTACACACTTGGGGATTGTGGA
TGACAGTCTGCCAGCGCTCGCGATGATGTATGAGCACCCGCCCATGAACA
AGGATGCCTCCTTGGTGCTACGGCTCGACAAGGCGGCCGATAACTTGTCC
ACGCTCTCACACCAGTGGGCATGGATCCAGGAAATTTGGACCATCAGCCA
CATCACCTCCGCGGCTGTTCACCTCAACTCGATCTACCCTCGTCAGGCCA
GCGGGCCCACATCTCCCATAGCCCATCCTCACCACTCCTGGCAGAGTCAG
CTGCACGAGCAATTGCGCAACATCCAACTCTACAAGGTCGACATTGGCAA
CCTGTGTAGCGAGGCCCGCGCTGTCTTGTCGCGCAACGTGCAGATCATCG
AAGCCAACATGGAAGACCAGGTTGCCCAGACGTGGATTCTCACCGCGTAC
CGCACCTTGCTCATCCATCTCCTGTTCCCGCGCATGGAGACCATCGCCAT
CACAGCCGATCTCGTCCAGAACCTAGCCGACTGTCTTGCCTTCTTTGCGC
GCAGCTTCACCGTCCTCGTCCACATCTCTACTACTCATGCGCTCCCCCAG
TCGAGCATTCAGTCGTGCATCCGCTCCTACATGGCTGGTCTGGCCGCCTG
CGGTAGCGCCATTGACGCAATCTTCCTCATATCACCCAAACAACTTCAAT
GCTGGGAGCCGGAAATCCTACAGGGGCTAGCCCGACTACTCGAGCAAGCG
ACGAAGCTAGACACGCTCTTCACGGACGACACACTACTGACGGACTGGCG
GTGGCGAAATGTACAAAACCGCTTCCACCGGTTATCCAAATACAAAACGG
AGCTGCAAAGTGTGCCAGCCGGGTGGGATGGCCTTCCTTTGCCTGTCAGG
CCGGCGGAGCGACAATCATCTACCTCCTCCCTGCAACCAGTGGCCGCCGC
GGGGGTGGCAGAGACTACAGAGCCAACACCCACCCCCCTAGTGCCGATAT
ACACGGCTGCTACCGAATTACCGTATGTGCCGGGGCACAGCATCCCAGTT
GAACCTCCGACGTATGAAGAAACATAG
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Coding sequence (CDS) from alignment at An16:859894..862020+

>CBS51388_010093-T1 ID=CBS51388_010093-T1|Name=CBS51388_010093-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2127bp|location=Sequence derived from alignment at An16:859894..862020+ (Aspergillus niger CBS 513.88)
ATGCACCCGGCTCCCGCGACGACGGACCGGCGACGCAGCTGTCGCTTTTG
CCGCAGTCGCAAGCTCCGCTGCTCAGGCGCCAGCGTCTGCAGCGCCTGCA
AGGACCGCCAGATCGAATGTGTCTATGATCAGGGCGGCCCCAAAGGTCGT
CCCCGGGTCTCTGGCGCGCGCACCACCGGCCGTCTGGTTGCTGGCCAGCC
GGCGCCCGAGCCCGACATGAAACAGGCTCCCTGGACATCCCCCTCGAGTC
CGTCGTCCTCCGCGGCCGGCCAGCTCTTTTCGCCGCGTCTTAAGAGTGTT
GCCGATGCTCTATCCGAGGTGACGGCCGAGATTCAGGAGAAGCTACAGGG
TCCAAGGGTCGATGGGATGCCATGGAGCCAGGCCGGTTCTCCTCGCCAGC
GGCCGGCTAAACTGGGCTGTCGCGAGCTTATCCTGGTGCTGACCCAGGAT
ATCATCGACGCCACAGTGGCCCGTTTCAGCGGACTCGATTGCCTTGCTTT
CTTCGCTAATCAAAGTCAATTCTTCCGAGCCAGCCTGGCGTCCAGCAGTC
CTCCCGAACCGTCCCCCGCCCTCGAGCCGGCGCCGCTGGCGGCATACAAC
GGCTACCGCATCACCCAGCTCTTAGATGTGTGGTTTGGTGCGCACCCGTT
GTCCATGGCCCTTTCAAAGACGCTGCTGCTACGTGACGTCCGCAGCAACT
CCTACGACCCCCTGCTCCTGGCTGTCGTGCTAGGGGGCGGTCTGCTGGAA
CTGGGGGATACGGACACCCAGGTGGAATCCGAGCAGCTCCTGCACTGGGC
GTCGTCACGCCTACAGTATATTTCCACGGCGGCAGCCGACCTGTCAACTG
CACAGGCGCTCAGCTTGCTGGCCTGGCATGAGACATGTCAGGGAAACATT
ATCAAAGCAATGACCTACAGCATCTACGCGAATCGTACCGTAACCCGCCT
CATCATGGACACCTTGACCCGGTCCTCACGCGATGTCCGACAGATCAACG
GGGTCGACCTAGTGCAGATTGAGTTGGAGATGATGCACATCCTGGGTTGG
ATGACTCTCGCGCTGATGGTCTGGTATTTTACACACTTGGGGATTGTGGA
TGACAGTCTGCCAGCGCTCGCGATGATGTATGAGCACCCGCCCATGAACA
AGGATGCCTCCTTGGTGCTACGGCTCGACAAGGCGGCCGATAACTTGTCC
ACGCTCTCACACCAGTGGGCATGGATCCAGGAAATTTGGACCATCAGCCA
CATCACCTCCGCGGCTGTTCACCTCAACTCGATCTACCCTCGTCAGGCCA
GCGGGCCCACATCTCCCATAGCCCATCCTCACCACTCCTGGCAGAGTCAG
CTGCACGAGCAATTGCGCAACATCCAACTCTACAAGGTCGACATTGGCAA
CCTGTGTAGCGAGGCCCGCGCTGTCTTGTCGCGCAACGTGCAGATCATCG
AAGCCAACATGGAAGACCAGGTTGCCCAGACGTGGATTCTCACCGCGTAC
CGCACCTTGCTCATCCATCTCCTGTTCCCGCGCATGGAGACCATCGCCAT
CACAGCCGATCTCGTCCAGAACCTAGCCGACTGTCTTGCCTTCTTTGCGC
GCAGCTTCACCGTCCTCGTCCACATCTCTACTACTCATGCGCTCCCCCAG
TCGAGCATTCAGTCGTGCATCCGCTCCTACATGGCTGGTCTGGCCGCCTG
CGGTAGCGCCATTGACGCAATCTTCCTCATATCACCCAAACAACTTCAAT
GCTGGGAGCCGGAAATCCTACAGGGGCTAGCCCGACTACTCGAGCAAGCG
ACGAAGCTAGACACGCTCTTCACGGACGACACACTACTGACGGACTGGCG
GTGGCGAAATGTACAAAACCGCTTCCACCGGTTATCCAAATACAAAACGG
AGCTGCAAAGTGTGCCAGCCGGGTGGGATGGCCTTCCTTTGCCTGTCAGG
CCGGCGGAGCGACAATCATCTACCTCCTCCCTGCAACCAGTGGCCGCCGC
GGGGGTGGCAGAGACTACAGAGCCAACACCCACCCCCCTAGTGCCGATAT
ACACGGCTGCTACCGAATTACCGTATGTGCCGGGGCACAGCATCCCAGTT
GAACCTCCGACGTATGAAGAAACATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010093CBS51388_010093Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010093-T1.exon1CBS51388_010093-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010093-T1.cdsCBS51388_010093-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010093-T1CBS51388_010093-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:859894..862020 +
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