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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:885063..886063+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010100-T1 ID=CBS51388_010100-T1|Name=CBS51388_010100-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1001bp|location=Sequence derived from alignment at An16:885063..886063+ (Aspergillus niger CBS 513.88)
ATGGATTCTCTTACGACCCATCCTTCTACCGCGCAGCAGGCCCGGGCCTT
CACTTCCCCCGCTTCTCTGTCCTTCCCCGGTGGTGCCGGCGATTTGACTC
CGCCTTCCGATAAAGACGGGAACATGGCGATGGCTCAGGGTGCGAATGGG
ATGATGAACGGTCAGCAGCAGGGAGGAAATGCCACTAATGGCAACGGGGT
GGCGCCCGCAACTCCAGCTGCGACTCCCGGTGCCAACACTCCGGGAAGTG
GCATTGTGCCTACGTTGCAGTGAGTATACTCTTGCTGTCTCTACTTCTGG
GTCACCAGATTACTGAACAATGATCTCTCTTTCTTCTTTAAAGAAACATT
GTCGCGACGGTCAACCTTGACTGTCGTCTGGACTTGAAAACGATCGCACT
CCACGCAAGAAATGCGGAGTACAACCCTAAGGTATTACTTTCCACACCTC
CCTGTGCTTGATATGTCAGGGCATAGTGTGGCTGAACTGTTCTTTTTTTC
TTCCAATAGCGTTTCGCGGCCGTGATCATGCGTATCCGAGAGCCGAAGAC
GACCGCTTTGATCTTCGCCTCGGGCAAGATGGTGGTTACTGGTGCCAAGT
CGGAGGATGACTCCAAGCTGGCTTCCAGAAAGTACGCGCGTATCATCCAG
AAGCTTGGTTTCAATGCCAAGTTCACGGATTTCAAGATCCAGAACATCGT
GGGTTCTTGCGATATCAAGTTCCCCATCCGCCTGGAGGGTTTGGCCAGTC
GCCATCACAACTTCAGTTCCTACGAACCTGAGTTGTTCCCCGGTCTTATC
TACCGCATGATGAAGCCTAAGATCGTACTGCTTATCTTCGTCAGTGGAAA
GATCGTCCTCACTGGTGCTAAGGTCCGTGAGGAGATCTACCAGGCGTTCG
AACTGATCTATCCTGTGCTTTCGGGTATGCATCGCTCTCCTCGCTTCGGA
TCTGAAGTGGACCTCTTGCTAACCAGCTGTAAAGATTTCCGTAAAGTCTA
A back to topCoding sequence (CDS) from alignment at An16:885063..886063+ >CBS51388_010100-T1 ID=CBS51388_010100-T1|Name=CBS51388_010100-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2547bp|location=Sequence derived from alignment at An16:885063..886063+ (Aspergillus niger CBS 513.88)
ATGGATTCTCTTACGACCCATCCTTCTACCGCGCAGCAGGCCCGGGCCTT
CACTTCCCCCGCTTCTCTGTCCTTCCCCGGTGGTGCCGGCGATTTGACTC
CGCCTTCCGATAAAGACGGGAACATGGCGATGGCTCAGGGTGCGAATGGG
ATGATGAACGGTCAGCAGCAGGGAGGAAATGCCACTAATGGCAACGGGGT
GGCGCCCGCAACTCCAGCTGCGACTCCCGGTGCCAACACTCCGGGAAGTG
GCATTGTGCCTACGTTGCAAAACATTGTCGCGACGGTCAACCTTGACTGT
CGTCTGGACTTGAAAACGATCGCACTCCACGCAAGAAATGCGGAGTACAA
CCCTAAGCGTTTCGCGGCCGTGATCATGCGTATCCGAGAGCCGAAGACGA
CCGCTTTGATCTTCGCCTCGGGCAAGATGGTGGTTACTGGTGCCAAGTCG
GAGGATGACTCCAAGCTGGCTTCCAGAAAGTACGCGCGTATCATCCAGAA
GCTTGGTTTCAATGCCAAGTTCACGGATTTCAAGATCCAGAACATCGTGG
GTTCTTGCGATATCAAGTTCCCCATCCGCCTGGAGGGTTTGGCCAGTCGC
CATCACAACTTCAGTTCCTACGAACCTGAGTTGTTCCCCGGTCTTATCTA
CCGCATGATGAAGCCTAAGATCGTACTGCTTATCTTCGTCAGTGGAAAGA
TCGTCCTCACTGGTGCTAAGGTCCGTGAGGAGATCTACCAGGCGTTCGAA
CTGATCTATCCTGTGCTTTCGGGTATGCATCGCTCTCCTCGCTTCGGATC
TGAAGTGGACCTCTTGCTAACCAGCTGTAAAGATTTCCGTAAAGTCTAAA
TGGATTCTCTTACGACCCATCCTTCTACCGCGCAGCAGGCCCGGGCCTTC
ACTTCCCCCGCTTCTCTGTCCTTCCCCGGTGGTGCCGGCGATTTGACTCC
GCCTTCCGATAAAGACGGGAACATGGCGATGGCTCAGGGTGCGAATGGGA
TGATGAACGGTCAGCAGCAGGGAGGAAATGCCACTAATGGCAACGGGGTG
GCGCCCGCAACTCCAGCTGCGACTCCCGGTGCCAACACTCCGGGAAGTGG
CATTGTGCCTACGTTGCAAAACATTGTCGCGACGGTCAACCTTGACTGTC
GTCTGGACTTGAAAACGATCGCACTCCACGCAAGAAATGCGGAGTACAAC
CCTAAGCGTTTCGCGGCCGTGATCATGCGTATCCGAGAGCCGAAGACGAC
CGCTTTGATCTTCGCCTCGGGCAAGATGGTGGTTACTGGTGCCAAGTCGG
AGGATGACTCCAAGCTGGCTTCCAGAAAGTACGCGCGTATCATCCAGAAG
CTTGGTTTCAATGCCAAGTTCACGGATTTCAAGATCCAGAACATCGTGGG
TTCTTGCGATATCAAGTTCCCCATCCGCCTGGAGGGTTTGGCCAGTCGCC
ATCACAACTTCAGTTCCTACGAACCTGAGTTGTTCCCCGGTCTTATCTAC
CGCATGATGAAGCCTAAGATCGTACTGCTTATCTTCGTCAGTGGAAAGAT
CGTCCTCACTGGTGCTAAGGTCCGTGAGGAGATCTACCAGGCGTTCGAAC
TGATCTATCCTGTGCTTTCGGGTATGCATCGCTCTCCTCGCTTCGGATCT
GAAGTGGACCTCTTGCTAACCAGCTGTAAAGATTTCCGTAAAGTCTAAAT
GGATTCTCTTACGACCCATCCTTCTACCGCGCAGCAGGCCCGGGCCTTCA
CTTCCCCCGCTTCTCTGTCCTTCCCCGGTGGTGCCGGCGATTTGACTCCG
CCTTCCGATAAAGACGGGAACATGGCGATGGCTCAGGGTGCGAATGGGAT
GATGAACGGTCAGCAGCAGGGAGGAAATGCCACTAATGGCAACGGGGTGG
CGCCCGCAACTCCAGCTGCGACTCCCGGTGCCAACACTCCGGGAAGTGGC
ATTGTGCCTACGTTGCAAAACATTGTCGCGACGGTCAACCTTGACTGTCG
TCTGGACTTGAAAACGATCGCACTCCACGCAAGAAATGCGGAGTACAACC
CTAAGCGTTTCGCGGCCGTGATCATGCGTATCCGAGAGCCGAAGACGACC
GCTTTGATCTTCGCCTCGGGCAAGATGGTGGTTACTGGTGCCAAGTCGGA
GGATGACTCCAAGCTGGCTTCCAGAAAGTACGCGCGTATCATCCAGAAGC
TTGGTTTCAATGCCAAGTTCACGGATTTCAAGATCCAGAACATCGTGGGT
TCTTGCGATATCAAGTTCCCCATCCGCCTGGAGGGTTTGGCCAGTCGCCA
TCACAACTTCAGTTCCTACGAACCTGAGTTGTTCCCCGGTCTTATCTACC
GCATGATGAAGCCTAAGATCGTACTGCTTATCTTCGTCAGTGGAAAGATC
GTCCTCACTGGTGCTAAGGTCCGTGAGGAGATCTACCAGGCGTTCGAACT
GATCTATCCTGTGCTTTCGGGTATGCATCGCTCTCCTCGCTTCGGATCTG
AAGTGGACCTCTTGCTAACCAGCTGTAAAGATTTCCGTAAAGTCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006352 | DNA-templated transcription, initiation |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264HTG |
| DBxref | InterPro:IPR033710 |
| DBxref | InterPro:IPR030491 |
| DBxref | InterPro:IPR012295 |
| DBxref | InterPro:IPR000814 |
| DBxref | PFAM:PF00352 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:885063..886063 + |
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