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CBS51388_010102-T1, CBS51388_010102-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010102-T1
Unique NameCBS51388_010102-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:890021..891110+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010102-T1 ID=CBS51388_010102-T1|Name=CBS51388_010102-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1090bp|location=Sequence derived from alignment at An16:890021..891110+ (Aspergillus niger CBS 513.88)
ATGAGCGCACCACGGGTCGGGCGAGCAGCGCTGAAGAAGGCCAAGTTGCC
TGCTTCTGCTTCTGCTTCCAAGCCAGCGCCTCGATTCCCAGTGGCAGACG
GCACCGGGTTAGTCTCATCGACTCCGCATTGCCCGTGTCTCTCTTTGTCA
GTCACAACCTGTTGACGCCTACTGACTTACTGTAATGTGCAGACCCAAAA
CCCTACCTAAACGCGCCAACCAACACCTCAAGGATCTCCCTTCCACGCCC
CCGTCCGCCCCCGTCTCGCCCAGAGTCATGACCATCTTCGGCGTCAGCGC
CCTCACTCTCAGCACCTACATCGGCTACCTCTATGCCTCCTACCGTCGCG
AAGTCACTCAATCGCAATCCCTCTCTGTCCCCCACGATGTTTCCGACCGC
TACAACCACACCGCACGCACCTTCGACGCAGACGTCGAAATGTCCGAGAA
AGTCATGCGCATGGGCTCCAAGCGCGCAGACCTGATCAGTCGCGCACGCG
GCGACGTCCTCGAAGTCAGCTGCGGTACCGGCCGAAACCTCCAGTATTAT
GAACTCGGGCAGCGGAGGGGACTGGATAGCAAGGGACGCGCAGGCATGCA
TGGATGTCGGTCCGTAACATTTGTGGATTTGAGTCCGGAGATGGTGGAGA
TTACGAAGGCCAAGTTTGCGAAACAGTTCCCGGAGCATGAGGTGCCGGTG
AATTTCGAAGTACAGGATGCCGCAGGCGTGCCTAGGCGTCCGGTTGATCC
GTCACGGAAGGGTGATGAGGGTTATTATGATACGGTGGTGCAGACCATGG
GGCTTTGTTCGATGCCGGATCCCGTGGGCACGTTGCGCCATCTGGGGACG
GTTGTTGAGCCGAATAAGGGAGAGATCTTGTTGTTGGAGCACGGGCGGTC
CCACTATGATTGGCTCAACCGCATCTTGGATAATTTGGCGTCGGCGCATG
CGGATAGGCATGGGTGTTGGTGGAATCGGGATATTGGGAAGATCGTGCGG
GATAGTGGGTTGGAGGTGGTGGAGGAGAAACGCTGGCATTTTGGGACGAC
GTGGAAGTATGTCTTGCGGCCGGCGAGGACGGAGAAGTGA
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Coding sequence (CDS) from alignment at An16:890021..891110+

>CBS51388_010102-T1 ID=CBS51388_010102-T1|Name=CBS51388_010102-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2010bp|location=Sequence derived from alignment at An16:890021..891110+ (Aspergillus niger CBS 513.88)
ATGAGCGCACCACGGGTCGGGCGAGCAGCGCTGAAGAAGGCCAAGTTGCC
TGCTTCTGCTTCTGCTTCCAAGCCAGCGCCTCGATTCCCAGTGGCAGACG
GCACCGGACCCAAAACCCTACCTAAACGCGCCAACCAACACCTCAAGGAT
CTCCCTTCCACGCCCCCGTCCGCCCCCGTCTCGCCCAGAGTCATGACCAT
CTTCGGCGTCAGCGCCCTCACTCTCAGCACCTACATCGGCTACCTCTATG
CCTCCTACCGTCGCGAAGTCACTCAATCGCAATCCCTCTCTGTCCCCCAC
GATGTTTCCGACCGCTACAACCACACCGCACGCACCTTCGACGCAGACGT
CGAAATGTCCGAGAAAGTCATGCGCATGGGCTCCAAGCGCGCAGACCTGA
TCAGTCGCGCACGCGGCGACGTCCTCGAAGTCAGCTGCGGTACCGGCCGA
AACCTCCAGTATTATGAACTCGGGCAGCGGAGGGGACTGGATAGCAAGGG
ACGCGCAGGCATGCATGGATGTCGGTCCGTAACATTTGTGGATTTGAGTC
CGGAGATGGTGGAGATTACGAAGGCCAAGTTTGCGAAACAGTTCCCGGAG
CATGAGGTGCCGGTGAATTTCGAAGTACAGGATGCCGCAGGCGTGCCTAG
GCGTCCGGTTGATCCGTCACGGAAGGGTGATGAGGGTTATTATGATACGG
TGGTGCAGACCATGGGGCTTTGTTCGATGCCGGATCCCGTGGGCACGTTG
CGCCATCTGGGGACGGTTGTTGAGCCGAATAAGGGAGAGATCTTGTTGTT
GGAGCACGGGCGGTCCCACTATGATTGGCTCAACCGCATCTTGGATAATT
TGGCGTCGGCGCATGCGGATAGGCATGGGTGTTGGTGGAATCGGGATATT
GGGAAGATCGTGCGGGATAGTGGGTTGGAGGTGGTGGAGGAGAAACGCTG
GCATTTTGGGACGACGTGGAAGTATGTCTTGCGGCCGGCGAGGACGGAGA
AGTGAATGAGCGCACCACGGGTCGGGCGAGCAGCGCTGAAGAAGGCCAAG
TTGCCTGCTTCTGCTTCTGCTTCCAAGCCAGCGCCTCGATTCCCAGTGGC
AGACGGCACCGGACCCAAAACCCTACCTAAACGCGCCAACCAACACCTCA
AGGATCTCCCTTCCACGCCCCCGTCCGCCCCCGTCTCGCCCAGAGTCATG
ACCATCTTCGGCGTCAGCGCCCTCACTCTCAGCACCTACATCGGCTACCT
CTATGCCTCCTACCGTCGCGAAGTCACTCAATCGCAATCCCTCTCTGTCC
CCCACGATGTTTCCGACCGCTACAACCACACCGCACGCACCTTCGACGCA
GACGTCGAAATGTCCGAGAAAGTCATGCGCATGGGCTCCAAGCGCGCAGA
CCTGATCAGTCGCGCACGCGGCGACGTCCTCGAAGTCAGCTGCGGTACCG
GCCGAAACCTCCAGTATTATGAACTCGGGCAGCGGAGGGGACTGGATAGC
AAGGGACGCGCAGGCATGCATGGATGTCGGTCCGTAACATTTGTGGATTT
GAGTCCGGAGATGGTGGAGATTACGAAGGCCAAGTTTGCGAAACAGTTCC
CGGAGCATGAGGTGCCGGTGAATTTCGAAGTACAGGATGCCGCAGGCGTG
CCTAGGCGTCCGGTTGATCCGTCACGGAAGGGTGATGAGGGTTATTATGA
TACGGTGGTGCAGACCATGGGGCTTTGTTCGATGCCGGATCCCGTGGGCA
CGTTGCGCCATCTGGGGACGGTTGTTGAGCCGAATAAGGGAGAGATCTTG
TTGTTGGAGCACGGGCGGTCCCACTATGATTGGCTCAACCGCATCTTGGA
TAATTTGGCGTCGGCGCATGCGGATAGGCATGGGTGTTGGTGGAATCGGG
ATATTGGGAAGATCGTGCGGGATAGTGGGTTGGAGGTGGTGGAGGAGAAA
CGCTGGCATTTTGGGACGACGTGGAAGTATGTCTTGCGGCCGGCGAGGAC
GGAGAAGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010102CBS51388_010102Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010102-T1.exon1CBS51388_010102-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010102-T1.exon2CBS51388_010102-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010102-T1.cdsCBS51388_010102-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010102-T1CBS51388_010102-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029063
DBxrefPFAM:PF13649
DBxrefPFAM:PF13489
DBxrefPFAM:PF08242
DBxrefPFAM:PF08241
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:890021..891110 +
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