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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:906080..908381- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010105-T1 ID=CBS51388_010105-T1|Name=CBS51388_010105-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2302bp|location=Sequence derived from alignment at An16:906080..908381- (Aspergillus niger CBS 513.88)
ATGTCGCAGGATACAGGATTGTTCAGCATCAGGCGCACCCGCGAGGTATG
TGCCTTGCTTCCTTCTGGCCTACCCCTCTTGTACAATACTAATCTAGCTG
TCTCAGTCTATGGCGATGGGTAGCCAAAATTACTCCGCTCTTCCGCAACC
CTCCTCGGCCTTGAAGCGCACCAGCTCCATTGGGTACCAGAATCCTCCTT
TCACCTCTCAGCACACGCGTATGTCGCTTCTCAACTCCGCCAGTCGCCCC
CAACAGCCCAACTTTCAGCGTTCTTCTTCTGGTGGAGGCTTTGGTGCCGA
TGCCGGTCTCTCATCAGTCAGACGCTCCGTCTCCAGTAATATGTTCCATG
GTCCTAGTGTCGGGCGCCCAAGCTTTGCTCCCGGGCCGATGTCGTCGCAA
AGCACAGCAGGGTCGCAAGGATTGCAACGGAGGAGTAGTGTCTTTTCACG
ACCATCTGTGGGTGGCGCCATGGGTCATCATTCTTTCTTCACTCAAGTCC
CGTCAGTTGCTGGTGTCCCCAGGGACCCACGGCCACTCAGGGACAGGTCT
TTCCAAGCTCGTATTGGACAAGAGCTCTTGGAATATCTGACGCATAACAA
TTTTGAGCTTGAGATGAAGCATTCACTGGGGCAGAACACCTTACGGTCTC
CTACTCAAAAAGATTTCAACTACATCTTCCAGTGGCTGTATCATCGCATT
GATCCCGGGTACAAGTTTCAGAAGAGCATGGATGCGGAGGTACCACCTAT
TCTCAAGCAACTACGTTACCCCTACGAAAAGGGTATCACTAAGTCGCAGA
TTGCGGCTGTGGGAGGCCAGAACTGGCCGACATTCCTCGGTATGCTGCAT
TGGTTGATGCAACTCGCTCAGATGATGGATCGATATTTGCTCGGGGAATA
CGATGAAGCTTGCGCAGAGATGGGAGTCGATGTATCCGGCGACCGGATTA
TCTTCCGTTTCCTTACAAGTGCCTACCATGACTGGCTGCAAGGCGGGGAA
GATGAGGATGACGCAACAGCAGAGAAGAGACTAGTACCTCACGTCGAAAT
GATGGCCCAGGAGTTTGAAAGAGGAAATGAAAAATATGTTCAAGAGATGG
AGTCTTTGGAAGCCGAAAACCGAGCGCTACGTGACCAGATTGAAGAGATG
GAGAAGAACGCTCCGGACATGGCCAAGCTAGACAAGCACTTCAGGATTTT
GGAGGACGACAAGAGGAAGTTTGAGGACTACAACCAGAATGTCCAGGGCA
AGATCGAGAAATATGAGACCCGTATCAAATTCCTGGATGACGAGCTTAAG
AAGACGGAGGATGACCTGCAAGCCGCCGAAGAGGAGCGGGCTGGGCTTCA
GGCCAGTGTTGACCAACAAGGCCTGACAATCCAGGATATTGACCGTATGA
ACACGGAACGTGAACGCCTGCAGAGGAATCTTGACGATACGGTCAATCGG
TTGGAAGAAACGCACGCGCGGGTCATGGCAAAGGAGGCCGAGGCTAGTAG
AAAACTCGAAGATTTAGAGGAGATCGTCAAGGTCTACAACACGCTCGGAT
ACCAGAATAGTTTGATTCCTTCGTCAGCTGTCAATGCCAAGGGCGACGAT
TACGAACTCAGTCTCAACGTCAACGAGAGCAATTTCTCCGCCTCTCAGGT
CGGTGGTCTAGCGAACCGAATCTCTACCGATGGAGATCGACTATTGGCGG
ACCCGTTCACTGGCTATCACCCAGCACACTTGCTCAACCTCGATCTCCGC
GGCATCGTGCGCAGCAATCTACAGGCTCTCCGGAAGGAGATCAACGAGCG
CCGGAAGCGTGCCATTGATGATGACTTGGAACGACGCAATCTCTTGGACA
ACATCAAGGAAGCAATGGACGAGAAGCGAAGCGAGGTTGAGGCTTTGGAG
CATAAGGCACGTGCCGCTGAAGAGGAATTCGAGCGGCTCAAGGAGGTCAC
CACAACGCAGAAGCTTGCTTCGGATGCACAGATTGAAAAGATGGAGAAGG
AGCTGGCCAAGATGCGAGCCACGTTGGGCGAAAGCGTCCAACTGATGGAG
CAGCGCGAGATGAATACTAACATTGAGTATGAACAATTGACTCTCCGCGC
AAATGCGTTGCGTGAGGAGCTACACACCAATGTGGAGAGCATGCTGAACG
ATGTCATCCGTTTCAAGGTCCATATTCAAAAAGGTCTGGAAGACTACGAG
AGCTTTGTTGTCGACGAGGTCGAGCAGGAATTGGGTGGTGACATGCAGTT
TGCAGATGAGGACATTGAAATGGGAGTTGAAGAGGAAGAGGAGGAGCTTT
GA back to topCoding sequence (CDS) from alignment at An16:906080..908381- >CBS51388_010105-T1 ID=CBS51388_010105-T1|Name=CBS51388_010105-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4500bp|location=Sequence derived from alignment at An16:906080..908381- (Aspergillus niger CBS 513.88)
CTGTCTCAGTCTATGGCGATGGGTAGCCAAAATTACTCCGCTCTTCCGCA
ACCCTCCTCGGCCTTGAAGCGCACCAGCTCCATTGGGTACCAGAATCCTC
CTTTCACCTCTCAGCACACGCGTATGTCGCTTCTCAACTCCGCCAGTCGC
CCCCAACAGCCCAACTTTCAGCGTTCTTCTTCTGGTGGAGGCTTTGGTGC
CGATGCCGGTCTCTCATCAGTCAGACGCTCCGTCTCCAGTAATATGTTCC
ATGGTCCTAGTGTCGGGCGCCCAAGCTTTGCTCCCGGGCCGATGTCGTCG
CAAAGCACAGCAGGGTCGCAAGGATTGCAACGGAGGAGTAGTGTCTTTTC
ACGACCATCTGTGGGTGGCGCCATGGGTCATCATTCTTTCTTCACTCAAG
TCCCGTCAGTTGCTGGTGTCCCCAGGGACCCACGGCCACTCAGGGACAGG
TCTTTCCAAGCTCGTATTGGACAAGAGCTCTTGGAATATCTGACGCATAA
CAATTTTGAGCTTGAGATGAAGCATTCACTGGGGCAGAACACCTTACGGT
CTCCTACTCAAAAAGATTTCAACTACATCTTCCAGTGGCTGTATCATCGC
ATTGATCCCGGGTACAAGTTTCAGAAGAGCATGGATGCGGAGGTACCACC
TATTCTCAAGCAACTACGTTACCCCTACGAAAAGGGTATCACTAAGTCGC
AGATTGCGGCTGTGGGAGGCCAGAACTGGCCGACATTCCTCGGTATGCTG
CATTGGTTGATGCAACTCGCTCAGATGATGGATCGATATTTGCTCGGGGA
ATACGATGAAGCTTGCGCAGAGATGGGAGTCGATGTATCCGGCGACCGGA
TTATCTTCCGTTTCCTTACAAGTGCCTACCATGACTGGCTGCAAGGCGGG
GAAGATGAGGATGACGCAACAGCAGAGAAGAGACTAGTACCTCACGTCGA
AATGATGGCCCAGGAGTTTGAAAGAGGAAATGAAAAATATGTTCAAGAGA
TGGAGTCTTTGGAAGCCGAAAACCGAGCGCTACGTGACCAGATTGAAGAG
ATGGAGAAGAACGCTCCGGACATGGCCAAGCTAGACAAGCACTTCAGGAT
TTTGGAGGACGACAAGAGGAAGTTTGAGGACTACAACCAGAATGTCCAGG
GCAAGATCGAGAAATATGAGACCCGTATCAAATTCCTGGATGACGAGCTT
AAGAAGACGGAGGATGACCTGCAAGCCGCCGAAGAGGAGCGGGCTGGGCT
TCAGGCCAGTGTTGACCAACAAGGCCTGACAATCCAGGATATTGACCGTA
TGAACACGGAACGTGAACGCCTGCAGAGGAATCTTGACGATACGGTCAAT
CGGTTGGAAGAAACGCACGCGCGGGTCATGGCAAAGGAGGCCGAGGCTAG
TAGAAAACTCGAAGATTTAGAGGAGATCGTCAAGGTCTACAACACGCTCG
GATACCAGAATAGTTTGATTCCTTCGTCAGCTGTCAATGCCAAGGGCGAC
GATTACGAACTCAGTCTCAACGTCAACGAGAGCAATTTCTCCGCCTCTCA
GGTCGGTGGTCTAGCGAACCGAATCTCTACCGATGGAGATCGACTATTGG
CGGACCCGTTCACTGGCTATCACCCAGCACACTTGCTCAACCTCGATCTC
CGCGGCATCGTGCGCAGCAATCTACAGGCTCTCCGGAAGGAGATCAACGA
GCGCCGGAAGCGTGCCATTGATGATGACTTGGAACGACGCAATCTCTTGG
ACAACATCAAGGAAGCAATGGACGAGAAGCGAAGCGAGGTTGAGGCTTTG
GAGCATAAGGCACGTGCCGCTGAAGAGGAATTCGAGCGGCTCAAGGAGGT
CACCACAACGCAGAAGCTTGCTTCGGATGCACAGATTGAAAAGATGGAGA
AGGAGCTGGCCAAGATGCGAGCCACGTTGGGCGAAAGCGTCCAACTGATG
GAGCAGCGCGAGATGAATACTAACATTGAGTATGAACAATTGACTCTCCG
CGCAAATGCGTTGCGTGAGGAGCTACACACCAATGTGGAGAGCATGCTGA
ACGATGTCATCCGTTTCAAGGTCCATATTCAAAAAGGTCTGGAAGACTAC
GAGAGCTTTGTTGTCGACGAGGTCGAGCAGGAATTGGGTGGTGACATGCA
GTTTGCAGATGAGGACATTGAAATGGGAGTTGAAGAGGAAGAGGAGGAGC
TTTGAATGTCGCAGGATACAGGATTGTTCAGCATCAGGCGCACCCGCGAG
CTGTCTCAGTCTATGGCGATGGGTAGCCAAAATTACTCCGCTCTTCCGCA
ACCCTCCTCGGCCTTGAAGCGCACCAGCTCCATTGGGTACCAGAATCCTC
CTTTCACCTCTCAGCACACGCGTATGTCGCTTCTCAACTCCGCCAGTCGC
CCCCAACAGCCCAACTTTCAGCGTTCTTCTTCTGGTGGAGGCTTTGGTGC
CGATGCCGGTCTCTCATCAGTCAGACGCTCCGTCTCCAGTAATATGTTCC
ATGGTCCTAGTGTCGGGCGCCCAAGCTTTGCTCCCGGGCCGATGTCGTCG
CAAAGCACAGCAGGGTCGCAAGGATTGCAACGGAGGAGTAGTGTCTTTTC
ACGACCATCTGTGGGTGGCGCCATGGGTCATCATTCTTTCTTCACTCAAG
TCCCGTCAGTTGCTGGTGTCCCCAGGGACCCACGGCCACTCAGGGACAGG
TCTTTCCAAGCTCGTATTGGACAAGAGCTCTTGGAATATCTGACGCATAA
CAATTTTGAGCTTGAGATGAAGCATTCACTGGGGCAGAACACCTTACGGT
CTCCTACTCAAAAAGATTTCAACTACATCTTCCAGTGGCTGTATCATCGC
ATTGATCCCGGGTACAAGTTTCAGAAGAGCATGGATGCGGAGGTACCACC
TATTCTCAAGCAACTACGTTACCCCTACGAAAAGGGTATCACTAAGTCGC
AGATTGCGGCTGTGGGAGGCCAGAACTGGCCGACATTCCTCGGTATGCTG
CATTGGTTGATGCAACTCGCTCAGATGATGGATCGATATTTGCTCGGGGA
ATACGATGAAGCTTGCGCAGAGATGGGAGTCGATGTATCCGGCGACCGGA
TTATCTTCCGTTTCCTTACAAGTGCCTACCATGACTGGCTGCAAGGCGGG
GAAGATGAGGATGACGCAACAGCAGAGAAGAGACTAGTACCTCACGTCGA
AATGATGGCCCAGGAGTTTGAAAGAGGAAATGAAAAATATGTTCAAGAGA
TGGAGTCTTTGGAAGCCGAAAACCGAGCGCTACGTGACCAGATTGAAGAG
ATGGAGAAGAACGCTCCGGACATGGCCAAGCTAGACAAGCACTTCAGGAT
TTTGGAGGACGACAAGAGGAAGTTTGAGGACTACAACCAGAATGTCCAGG
GCAAGATCGAGAAATATGAGACCCGTATCAAATTCCTGGATGACGAGCTT
AAGAAGACGGAGGATGACCTGCAAGCCGCCGAAGAGGAGCGGGCTGGGCT
TCAGGCCAGTGTTGACCAACAAGGCCTGACAATCCAGGATATTGACCGTA
TGAACACGGAACGTGAACGCCTGCAGAGGAATCTTGACGATACGGTCAAT
CGGTTGGAAGAAACGCACGCGCGGGTCATGGCAAAGGAGGCCGAGGCTAG
TAGAAAACTCGAAGATTTAGAGGAGATCGTCAAGGTCTACAACACGCTCG
GATACCAGAATAGTTTGATTCCTTCGTCAGCTGTCAATGCCAAGGGCGAC
GATTACGAACTCAGTCTCAACGTCAACGAGAGCAATTTCTCCGCCTCTCA
GGTCGGTGGTCTAGCGAACCGAATCTCTACCGATGGAGATCGACTATTGG
CGGACCCGTTCACTGGCTATCACCCAGCACACTTGCTCAACCTCGATCTC
CGCGGCATCGTGCGCAGCAATCTACAGGCTCTCCGGAAGGAGATCAACGA
GCGCCGGAAGCGTGCCATTGATGATGACTTGGAACGACGCAATCTCTTGG
ACAACATCAAGGAAGCAATGGACGAGAAGCGAAGCGAGGTTGAGGCTTTG
GAGCATAAGGCACGTGCCGCTGAAGAGGAATTCGAGCGGCTCAAGGAGGT
CACCACAACGCAGAAGCTTGCTTCGGATGCACAGATTGAAAAGATGGAGA
AGGAGCTGGCCAAGATGCGAGCCACGTTGGGCGAAAGCGTCCAACTGATG
GAGCAGCGCGAGATGAATACTAACATTGAGTATGAACAATTGACTCTCCG
CGCAAATGCGTTGCGTGAGGAGCTACACACCAATGTGGAGAGCATGCTGA
ACGATGTCATCCGTTTCAAGGTCCATATTCAAAAAGGTCTGGAAGACTAC
GAGAGCTTTGTTGTCGACGAGGTCGAGCAGGAATTGGGTGGTGACATGCA
GTTTGCAGATGAGGACATTGAAATGGGAGTTGAAGAGGAAGAGGAGGAGC
TTTGAATGTCGCAGGATACAGGATTGTTCAGCATCAGGCGCACCCGCGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0031262 | Ndc80 complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0051315 | attachment of mitotic spindle microtubules to kinetochore |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092619RJ |
| DBxref | InterPro:IPR005550 |
| DBxref | InterPro:IPR038273 |
| DBxref | PFAM:PF03801 |
| Product | kinetochore-associated Ndc80 complex subunit ndc80 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:906080..908381 - |
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