You are here

Home

CBS51388_010141-T1, CBS51388_010141-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010141-T1
Unique NameCBS51388_010141-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:1012164..1013185-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010141-T1 ID=CBS51388_010141-T1|Name=CBS51388_010141-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1022bp|location=Sequence derived from alignment at An16:1012164..1013185- (Aspergillus niger CBS 513.88)
ATGGACCTCTCCAATCCGCGATGCGAGCATCTGGCCTCGCCTGATATCAA
AAACTTCATCCTCTCCATGTACGTCTTTTACTCTAACCATTATGTATCCT
ACATTATACCGAAGCTAACTGTAATCAGCCTCATCGTCTTCGGAATCCTC
CTTTCCTACACCCCCCAACATGTCCGCATTCTCACCATGAAGACCTCCTT
CGGCATCTCACCGTACTTCGTCCTCCTAGGAACCACATCTGGTTCCTCGG
CACTAGCAAACGTGATCTCCCAACAACAAAGCCTTCACGACATGGCCTGC
TGCAAGCAAGTCAATGGGATGGGCTGTTTCGCAGGAATCCTTGGAATTCT
TCAAGTCGGAACCCAATGCCTTTGCTTCTTCATCATGTAAGAACCCCATC
ATCGTCGTCAAACCATCCCATCCTAAACTAGCCACCAACTAACCCATCCA
GCCTATTCCTCTTCGTCCTCTTCTTCCCCCGGAACACCGCCCACCTCCCC
AAATCCAGCCCAACCTACCGCACCGCCGTAACCGTCGCCGTCATCTGCAT
CCTCCACGCCGCCTTCATGCTTATCACCACTCTCGCCGTCGGCTACACTC
GCCCCTCTTCCCTCCAGGCATGGTCCAACTTCTGCGGCATCCTCTCCGCC
CTCCTCGCCTCAATCCAATACTTCCCCCAGATCTACACGACTCTGCGACT
CCGCTGCGTCGGATCCCTCAGCATCCCCATGATGTGCATCCAAACGCCCG
GCAGTCTCGTCTGGGCGGGCAGTCTCGCAGCGCGATTAGGTCCAAAGGGG
TGGAGTACATGGGGCGTATTGATTGTGACGGCTTGTCTGCAGGGAACGCT
GCTCTGCTTGGGTGTGTTCTTTGAGTTCCTGGGACCAAACCGGGGACATA
GTCATGAAGGGCATGATAAGGATACTGAGGTTGTGAGGGGAGGGGCCGGG
GAAGAGGAGGTGGTGGCTGAGGATGATCAGGACTTGCCGTCGGAGGAGAC
GCCTTTGTTGAGGGATCAGTGA
back to top

Coding sequence (CDS) from alignment at An16:1012164..1013185-

>CBS51388_010141-T1 ID=CBS51388_010141-T1|Name=CBS51388_010141-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2691bp|location=Sequence derived from alignment at An16:1012164..1013185- (Aspergillus niger CBS 513.88)
CCTATTCCTCTTCGTCCTCTTCTTCCCCCGGAACACCGCCCACCTCCCCA
AATCCAGCCCAACCTACCGCACCGCCGTAACCGTCGCCGTCATCTGCATC
CTCCACGCCGCCTTCATGCTTATCACCACTCTCGCCGTCGGCTACACTCG
CCCCTCTTCCCTCCAGGCATGGTCCAACTTCTGCGGCATCCTCTCCGCCC
TCCTCGCCTCAATCCAATACTTCCCCCAGATCTACACGACTCTGCGACTC
CGCTGCGTCGGATCCCTCAGCATCCCCATGATGTGCATCCAAACGCCCGG
CAGTCTCGTCTGGGCGGGCAGTCTCGCAGCGCGATTAGGTCCAAAGGGGT
GGAGTACATGGGGCGTATTGATTGTGACGGCTTGTCTGCAGGGAACGCTG
CTCTGCTTGGGTGTGTTCTTTGAGTTCCTGGGACCAAACCGGGGACATAG
TCATGAAGGGCATGATAAGGATACTGAGGTTGTGAGGGGAGGGGCCGGGG
AAGAGGAGGTGGTGGCTGAGGATGATCAGGACTTGCCGTCGGAGGAGACG
CCTTTGTTGAGGGATCAGTGACCTCATCGTCTTCGGAATCCTCCTTTCCT
ACACCCCCCAACATGTCCGCATTCTCACCATGAAGACCTCCTTCGGCATC
TCACCGTACTTCGTCCTCCTAGGAACCACATCTGGTTCCTCGGCACTAGC
AAACGTGATCTCCCAACAACAAAGCCTTCACGACATGGCCTGCTGCAAGC
AAGTCAATGGGATGGGCTGTTTCGCAGGAATCCTTGGAATTCTTCAAGTC
GGAACCCAATGCCTTTGCTTCTTCATCATATGGACCTCTCCAATCCGCGA
TGCGAGCATCTGGCCTCGCCTGATATCAAAAACTTCATCCTCTCCATCCT
ATTCCTCTTCGTCCTCTTCTTCCCCCGGAACACCGCCCACCTCCCCAAAT
CCAGCCCAACCTACCGCACCGCCGTAACCGTCGCCGTCATCTGCATCCTC
CACGCCGCCTTCATGCTTATCACCACTCTCGCCGTCGGCTACACTCGCCC
CTCTTCCCTCCAGGCATGGTCCAACTTCTGCGGCATCCTCTCCGCCCTCC
TCGCCTCAATCCAATACTTCCCCCAGATCTACACGACTCTGCGACTCCGC
TGCGTCGGATCCCTCAGCATCCCCATGATGTGCATCCAAACGCCCGGCAG
TCTCGTCTGGGCGGGCAGTCTCGCAGCGCGATTAGGTCCAAAGGGGTGGA
GTACATGGGGCGTATTGATTGTGACGGCTTGTCTGCAGGGAACGCTGCTC
TGCTTGGGTGTGTTCTTTGAGTTCCTGGGACCAAACCGGGGACATAGTCA
TGAAGGGCATGATAAGGATACTGAGGTTGTGAGGGGAGGGGCCGGGGAAG
AGGAGGTGGTGGCTGAGGATGATCAGGACTTGCCGTCGGAGGAGACGCCT
TTGTTGAGGGATCAGTGACCTCATCGTCTTCGGAATCCTCCTTTCCTACA
CCCCCCAACATGTCCGCATTCTCACCATGAAGACCTCCTTCGGCATCTCA
CCGTACTTCGTCCTCCTAGGAACCACATCTGGTTCCTCGGCACTAGCAAA
CGTGATCTCCCAACAACAAAGCCTTCACGACATGGCCTGCTGCAAGCAAG
TCAATGGGATGGGCTGTTTCGCAGGAATCCTTGGAATTCTTCAAGTCGGA
ACCCAATGCCTTTGCTTCTTCATCATATGGACCTCTCCAATCCGCGATGC
GAGCATCTGGCCTCGCCTGATATCAAAAACTTCATCCTCTCCATCCTATT
CCTCTTCGTCCTCTTCTTCCCCCGGAACACCGCCCACCTCCCCAAATCCA
GCCCAACCTACCGCACCGCCGTAACCGTCGCCGTCATCTGCATCCTCCAC
GCCGCCTTCATGCTTATCACCACTCTCGCCGTCGGCTACACTCGCCCCTC
TTCCCTCCAGGCATGGTCCAACTTCTGCGGCATCCTCTCCGCCCTCCTCG
CCTCAATCCAATACTTCCCCCAGATCTACACGACTCTGCGACTCCGCTGC
GTCGGATCCCTCAGCATCCCCATGATGTGCATCCAAACGCCCGGCAGTCT
CGTCTGGGCGGGCAGTCTCGCAGCGCGATTAGGTCCAAAGGGGTGGAGTA
CATGGGGCGTATTGATTGTGACGGCTTGTCTGCAGGGAACGCTGCTCTGC
TTGGGTGTGTTCTTTGAGTTCCTGGGACCAAACCGGGGACATAGTCATGA
AGGGCATGATAAGGATACTGAGGTTGTGAGGGGAGGGGCCGGGGAAGAGG
AGGTGGTGGCTGAGGATGATCAGGACTTGCCGTCGGAGGAGACGCCTTTG
TTGAGGGATCAGTGACCTCATCGTCTTCGGAATCCTCCTTTCCTACACCC
CCCAACATGTCCGCATTCTCACCATGAAGACCTCCTTCGGCATCTCACCG
TACTTCGTCCTCCTAGGAACCACATCTGGTTCCTCGGCACTAGCAAACGT
GATCTCCCAACAACAAAGCCTTCACGACATGGCCTGCTGCAAGCAAGTCA
ATGGGATGGGCTGTTTCGCAGGAATCCTTGGAATTCTTCAAGTCGGAACC
CAATGCCTTTGCTTCTTCATCATATGGACCTCTCCAATCCGCGATGCGAG
CATCTGGCCTCGCCTGATATCAAAAACTTCATCCTCTCCAT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010141CBS51388_010141Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010141-T1CBS51388_010141-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010141-T1.cdsCBS51388_010141-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010141-T1.exon3CBS51388_010141-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_010141-T1.exon2CBS51388_010141-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010141-T1.exon1CBS51388_010141-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR006603
DBxrefPFAM:PF04193
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:1012164..1013185 -
Powered by Drupal