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CBS51388_010201-T1, CBS51388_010201-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010201-T1
Unique NameCBS51388_010201-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:1196257..1198085-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010201-T1 ID=CBS51388_010201-T1|Name=CBS51388_010201-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1829bp|location=Sequence derived from alignment at An16:1196257..1198085- (Aspergillus niger CBS 513.88)
ATGTCTGTGGCGCCCAAAGATGTCTTCGGCCATGGCACCGAAGAAGACCT
CACGCTTGAGCACTTGGGTTATCAGCAAGGTATGACTGGGATCGCTGTGA
ATTTTAGATCAATAGTGTACTTACTAACGTTATTATCCCTAGAATTCAAG
CGGTCGTTCGGCCTCTTGGATATGATAGGTTTCAGTTTTAGCATCGTTAC
TTGGTTGTCCACACCAACCCTACTATGTCGAACGATTGACTGACATCTAC
GAATAGCTGGAGTGCATTGAGCGGTGTATTCATCATTGGAGTAGATGCCG
GTGGTCCACCGGTTATGCTCTTCGGATGGTTAGGCGTGTGTGTAATTACT
TTTGCGGTTGCCCTATCCATGGCAGAATGGTGCTCAAGGTGGCCCGTGGC
CGGAGGGCAGTATTCATGGGTCTTTCTGCTGGCTCCACCAAAGATCGCTC
GAGAGATGTCGTATATAACGGGGTGGTTCATGCTAATGGGTAAGCGACAG
TATACCTCCAGACCTATGTTGCACAATGCTCAGTCGAAACAGGTATCCTT
GCCATGGGCTCTGCGAACAACTCATTTGCGGCCAACTTCATCCTGGGACA
AGCAAATCTGGTATATCCTGAGTATGTGATTGAACGATGGCATACTGTCT
TGGTCACTTATGCCGTCGCGATCTGGGCTCTCCTGGTCAATACATTCATG
CCACACCTGCTCAACCGCCTATCCCGGGCTATCCTGCTGTGGAACGTTTG
CTCGTTCGTCATCATCGTCGTAGTTCTACTAGCAACCAACAAAGACAAAC
AAGATGCCGCATTTGTATTTCAGGATTTTCAGAACACAACCGGTTGCGGA
TCCGCAATGGCAACAATGGTCGGAATTCTTCAAAGCTTCTTCGGCATGTG
CTGCTACGATACCCCAAGCCACATGACAGAAGAAATGACACATGCCTCGC
GAGATGCACCCAAAGCCATGGTCATGTCTGTTGGTATGGGCGCTGTAACG
GGGTTCATTTTTCTATTGACGCTCTGCTTCTGCATCGGCGACATCGATGC
CACTGCAAACTCCTCCACAGGCGTCCCCGTGCTGCAGATCTTCTACGACT
CAACCCATAGCAAAGTCGCCGCCTGCTTCATGACCAGTATGATGACAGTA
ATTATGATGGTAGCATCAGTAAGTCTTGTCGCAGAGGGCTCTCGAGCACT
ATTCGCATTCGCACGAGACCGGGGAATGCCATTCTCAGGGATCTTATCCC
AAGTGGAGAAGAGGAGAAAGATCCCGATATATGCGATATTGTTCACCGTT
GTGGTGCAAATGGCTTTCAACTCGATTTATTTCGGGACCGTTACTGGTTT
TGATACGGTTGTGTCTATCGCGACCACGGGGTTCTGTAAGACATCCCTAT
TGGGAATTTAGATACAAGGACAGAGCTAACAGCATCACCCTTTCAGACGT
CTCCTACGCACTGGTCCTCCTTGCTCGACTTCTCGGGTATTTCTTTGGCC
ATGACATCGCCCCAGTCGACGGACCTTACTCCTTCCCGTTGCCCATATCG
CTCGGCCTGCACGGCCTAGGGTTTCTATTCCTGTTTTTTGCGTTTATTAC
CTTCAACTTCCCTTCAGATGCACCAGTCACTCCGAATTCGATGAACTACA
CTAGTGCGGCGATCGGGTTGATTGCGTTGCTGAGCATTTTCACTTGGCTC
ATTACGGCCCGGAAGCAATTCAAGGGACCGGCTGATGTGCAGGACTTGGT
TGTAGATGGAGTGGAGCAGGTAGGAGAGGCAGGAGAGGGGAGTGCCAGTT
GTTCGGAGAAAGGCAAGCCAGATACTTGA
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Coding sequence (CDS) from alignment at An16:1196257..1198085-

>CBS51388_010201-T1 ID=CBS51388_010201-T1|Name=CBS51388_010201-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6750bp|location=Sequence derived from alignment at An16:1196257..1198085- (Aspergillus niger CBS 513.88)
ACGTCTCCTACGCACTGGTCCTCCTTGCTCGACTTCTCGGGTATTTCTTT
GGCCATGACATCGCCCCAGTCGACGGACCTTACTCCTTCCCGTTGCCCAT
ATCGCTCGGCCTGCACGGCCTAGGGTTTCTATTCCTGTTTTTTGCGTTTA
TTACCTTCAACTTCCCTTCAGATGCACCAGTCACTCCGAATTCGATGAAC
TACACTAGTGCGGCGATCGGGTTGATTGCGTTGCTGAGCATTTTCACTTG
GCTCATTACGGCCCGGAAGCAATTCAAGGGACCGGCTGATGTGCAGGACT
TGGTTGTAGATGGAGTGGAGCAGGTAGGAGAGGCAGGAGAGGGGAGTGCC
AGTTGTTCGGAGAAAGGCAAGCCAGATACTTGAGTATCCTTGCCATGGGC
TCTGCGAACAACTCATTTGCGGCCAACTTCATCCTGGGACAAGCAAATCT
GGTATATCCTGAGTATGTGATTGAACGATGGCATACTGTCTTGGTCACTT
ATGCCGTCGCGATCTGGGCTCTCCTGGTCAATACATTCATGCCACACCTG
CTCAACCGCCTATCCCGGGCTATCCTGCTGTGGAACGTTTGCTCGTTCGT
CATCATCGTCGTAGTTCTACTAGCAACCAACAAAGACAAACAAGATGCCG
CATTTGTATTTCAGGATTTTCAGAACACAACCGGTTGCGGATCCGCAATG
GCAACAATGGTCGGAATTCTTCAAAGCTTCTTCGGCATGTGCTGCTACGA
TACCCCAAGCCACATGACAGAAGAAATGACACATGCCTCGCGAGATGCAC
CCAAAGCCATGGTCATGTCTGTTGGTATGGGCGCTGTAACGGGGTTCATT
TTTCTATTGACGCTCTGCTTCTGCATCGGCGACATCGATGCCACTGCAAA
CTCCTCCACAGGCGTCCCCGTGCTGCAGATCTTCTACGACTCAACCCATA
GCAAAGTCGCCGCCTGCTTCATGACCACTGGAGTGCATTGAGCGGTGTAT
TCATCATTGGAGTAGATGCCGGTGGTCCACCGGTTATGCTCTTCGGATGG
TTAGGCGTGTGTGTAATTACTTTTGCGGTTGCCCTATCCATGGCAGAATG
GTGCTCAAGGTGGCCCGTGGCCGGAGGGCAGTATTCATGGGTCTTTCTGC
TGGCTCCACCAAAGATCGCTCGAGAGATGTCGTATATAACGGGGTGGTTC
ATGCTAATGGAATTCAAGCGGTCGTTCGGCCTCTTGGATATGATAGGTTT
CAGTTTTAGCATCGTTACTTGATGTCTGTGGCGCCCAAAGATGTCTTCGG
CCATGGCACCGAAGAAGACCTCACGCTTGAGCACTTGGGTTATCAGCAAG
ACGTCTCCTACGCACTGGTCCTCCTTGCTCGACTTCTCGGGTATTTCTTT
GGCCATGACATCGCCCCAGTCGACGGACCTTACTCCTTCCCGTTGCCCAT
ATCGCTCGGCCTGCACGGCCTAGGGTTTCTATTCCTGTTTTTTGCGTTTA
TTACCTTCAACTTCCCTTCAGATGCACCAGTCACTCCGAATTCGATGAAC
TACACTAGTGCGGCGATCGGGTTGATTGCGTTGCTGAGCATTTTCACTTG
GCTCATTACGGCCCGGAAGCAATTCAAGGGACCGGCTGATGTGCAGGACT
TGGTTGTAGATGGAGTGGAGCAGGTAGGAGAGGCAGGAGAGGGGAGTGCC
AGTTGTTCGGAGAAAGGCAAGCCAGATACTTGAGTATCCTTGCCATGGGC
TCTGCGAACAACTCATTTGCGGCCAACTTCATCCTGGGACAAGCAAATCT
GGTATATCCTGAGTATGTGATTGAACGATGGCATACTGTCTTGGTCACTT
ATGCCGTCGCGATCTGGGCTCTCCTGGTCAATACATTCATGCCACACCTG
CTCAACCGCCTATCCCGGGCTATCCTGCTGTGGAACGTTTGCTCGTTCGT
CATCATCGTCGTAGTTCTACTAGCAACCAACAAAGACAAACAAGATGCCG
CATTTGTATTTCAGGATTTTCAGAACACAACCGGTTGCGGATCCGCAATG
GCAACAATGGTCGGAATTCTTCAAAGCTTCTTCGGCATGTGCTGCTACGA
TACCCCAAGCCACATGACAGAAGAAATGACACATGCCTCGCGAGATGCAC
CCAAAGCCATGGTCATGTCTGTTGGTATGGGCGCTGTAACGGGGTTCATT
TTTCTATTGACGCTCTGCTTCTGCATCGGCGACATCGATGCCACTGCAAA
CTCCTCCACAGGCGTCCCCGTGCTGCAGATCTTCTACGACTCAACCCATA
GCAAAGTCGCCGCCTGCTTCATGACCACTGGAGTGCATTGAGCGGTGTAT
TCATCATTGGAGTAGATGCCGGTGGTCCACCGGTTATGCTCTTCGGATGG
TTAGGCGTGTGTGTAATTACTTTTGCGGTTGCCCTATCCATGGCAGAATG
GTGCTCAAGGTGGCCCGTGGCCGGAGGGCAGTATTCATGGGTCTTTCTGC
TGGCTCCACCAAAGATCGCTCGAGAGATGTCGTATATAACGGGGTGGTTC
ATGCTAATGGAATTCAAGCGGTCGTTCGGCCTCTTGGATATGATAGGTTT
CAGTTTTAGCATCGTTACTTGATGTCTGTGGCGCCCAAAGATGTCTTCGG
CCATGGCACCGAAGAAGACCTCACGCTTGAGCACTTGGGTTATCAGCAAG
ACGTCTCCTACGCACTGGTCCTCCTTGCTCGACTTCTCGGGTATTTCTTT
GGCCATGACATCGCCCCAGTCGACGGACCTTACTCCTTCCCGTTGCCCAT
ATCGCTCGGCCTGCACGGCCTAGGGTTTCTATTCCTGTTTTTTGCGTTTA
TTACCTTCAACTTCCCTTCAGATGCACCAGTCACTCCGAATTCGATGAAC
TACACTAGTGCGGCGATCGGGTTGATTGCGTTGCTGAGCATTTTCACTTG
GCTCATTACGGCCCGGAAGCAATTCAAGGGACCGGCTGATGTGCAGGACT
TGGTTGTAGATGGAGTGGAGCAGGTAGGAGAGGCAGGAGAGGGGAGTGCC
AGTTGTTCGGAGAAAGGCAAGCCAGATACTTGAGTATCCTTGCCATGGGC
TCTGCGAACAACTCATTTGCGGCCAACTTCATCCTGGGACAAGCAAATCT
GGTATATCCTGAGTATGTGATTGAACGATGGCATACTGTCTTGGTCACTT
ATGCCGTCGCGATCTGGGCTCTCCTGGTCAATACATTCATGCCACACCTG
CTCAACCGCCTATCCCGGGCTATCCTGCTGTGGAACGTTTGCTCGTTCGT
CATCATCGTCGTAGTTCTACTAGCAACCAACAAAGACAAACAAGATGCCG
CATTTGTATTTCAGGATTTTCAGAACACAACCGGTTGCGGATCCGCAATG
GCAACAATGGTCGGAATTCTTCAAAGCTTCTTCGGCATGTGCTGCTACGA
TACCCCAAGCCACATGACAGAAGAAATGACACATGCCTCGCGAGATGCAC
CCAAAGCCATGGTCATGTCTGTTGGTATGGGCGCTGTAACGGGGTTCATT
TTTCTATTGACGCTCTGCTTCTGCATCGGCGACATCGATGCCACTGCAAA
CTCCTCCACAGGCGTCCCCGTGCTGCAGATCTTCTACGACTCAACCCATA
GCAAAGTCGCCGCCTGCTTCATGACCACTGGAGTGCATTGAGCGGTGTAT
TCATCATTGGAGTAGATGCCGGTGGTCCACCGGTTATGCTCTTCGGATGG
TTAGGCGTGTGTGTAATTACTTTTGCGGTTGCCCTATCCATGGCAGAATG
GTGCTCAAGGTGGCCCGTGGCCGGAGGGCAGTATTCATGGGTCTTTCTGC
TGGCTCCACCAAAGATCGCTCGAGAGATGTCGTATATAACGGGGTGGTTC
ATGCTAATGGAATTCAAGCGGTCGTTCGGCCTCTTGGATATGATAGGTTT
CAGTTTTAGCATCGTTACTTGATGTCTGTGGCGCCCAAAGATGTCTTCGG
CCATGGCACCGAAGAAGACCTCACGCTTGAGCACTTGGGTTATCAGCAAG
ACGTCTCCTACGCACTGGTCCTCCTTGCTCGACTTCTCGGGTATTTCTTT
GGCCATGACATCGCCCCAGTCGACGGACCTTACTCCTTCCCGTTGCCCAT
ATCGCTCGGCCTGCACGGCCTAGGGTTTCTATTCCTGTTTTTTGCGTTTA
TTACCTTCAACTTCCCTTCAGATGCACCAGTCACTCCGAATTCGATGAAC
TACACTAGTGCGGCGATCGGGTTGATTGCGTTGCTGAGCATTTTCACTTG
GCTCATTACGGCCCGGAAGCAATTCAAGGGACCGGCTGATGTGCAGGACT
TGGTTGTAGATGGAGTGGAGCAGGTAGGAGAGGCAGGAGAGGGGAGTGCC
AGTTGTTCGGAGAAAGGCAAGCCAGATACTTGAGTATCCTTGCCATGGGC
TCTGCGAACAACTCATTTGCGGCCAACTTCATCCTGGGACAAGCAAATCT
GGTATATCCTGAGTATGTGATTGAACGATGGCATACTGTCTTGGTCACTT
ATGCCGTCGCGATCTGGGCTCTCCTGGTCAATACATTCATGCCACACCTG
CTCAACCGCCTATCCCGGGCTATCCTGCTGTGGAACGTTTGCTCGTTCGT
CATCATCGTCGTAGTTCTACTAGCAACCAACAAAGACAAACAAGATGCCG
CATTTGTATTTCAGGATTTTCAGAACACAACCGGTTGCGGATCCGCAATG
GCAACAATGGTCGGAATTCTTCAAAGCTTCTTCGGCATGTGCTGCTACGA
TACCCCAAGCCACATGACAGAAGAAATGACACATGCCTCGCGAGATGCAC
CCAAAGCCATGGTCATGTCTGTTGGTATGGGCGCTGTAACGGGGTTCATT
TTTCTATTGACGCTCTGCTTCTGCATCGGCGACATCGATGCCACTGCAAA
CTCCTCCACAGGCGTCCCCGTGCTGCAGATCTTCTACGACTCAACCCATA
GCAAAGTCGCCGCCTGCTTCATGACCACTGGAGTGCATTGAGCGGTGTAT
TCATCATTGGAGTAGATGCCGGTGGTCCACCGGTTATGCTCTTCGGATGG
TTAGGCGTGTGTGTAATTACTTTTGCGGTTGCCCTATCCATGGCAGAATG
GTGCTCAAGGTGGCCCGTGGCCGGAGGGCAGTATTCATGGGTCTTTCTGC
TGGCTCCACCAAAGATCGCTCGAGAGATGTCGTATATAACGGGGTGGTTC
ATGCTAATGGAATTCAAGCGGTCGTTCGGCCTCTTGGATATGATAGGTTT
CAGTTTTAGCATCGTTACTTGATGTCTGTGGCGCCCAAAGATGTCTTCGG
CCATGGCACCGAAGAAGACCTCACGCTTGAGCACTTGGGTTATCAGCAAG
ACGTCTCCTACGCACTGGTCCTCCTTGCTCGACTTCTCGGGTATTTCTTT
GGCCATGACATCGCCCCAGTCGACGGACCTTACTCCTTCCCGTTGCCCAT
ATCGCTCGGCCTGCACGGCCTAGGGTTTCTATTCCTGTTTTTTGCGTTTA
TTACCTTCAACTTCCCTTCAGATGCACCAGTCACTCCGAATTCGATGAAC
TACACTAGTGCGGCGATCGGGTTGATTGCGTTGCTGAGCATTTTCACTTG
GCTCATTACGGCCCGGAAGCAATTCAAGGGACCGGCTGATGTGCAGGACT
TGGTTGTAGATGGAGTGGAGCAGGTAGGAGAGGCAGGAGAGGGGAGTGCC
AGTTGTTCGGAGAAAGGCAAGCCAGATACTTGAGTATCCTTGCCATGGGC
TCTGCGAACAACTCATTTGCGGCCAACTTCATCCTGGGACAAGCAAATCT
GGTATATCCTGAGTATGTGATTGAACGATGGCATACTGTCTTGGTCACTT
ATGCCGTCGCGATCTGGGCTCTCCTGGTCAATACATTCATGCCACACCTG
CTCAACCGCCTATCCCGGGCTATCCTGCTGTGGAACGTTTGCTCGTTCGT
CATCATCGTCGTAGTTCTACTAGCAACCAACAAAGACAAACAAGATGCCG
CATTTGTATTTCAGGATTTTCAGAACACAACCGGTTGCGGATCCGCAATG
GCAACAATGGTCGGAATTCTTCAAAGCTTCTTCGGCATGTGCTGCTACGA
TACCCCAAGCCACATGACAGAAGAAATGACACATGCCTCGCGAGATGCAC
CCAAAGCCATGGTCATGTCTGTTGGTATGGGCGCTGTAACGGGGTTCATT
TTTCTATTGACGCTCTGCTTCTGCATCGGCGACATCGATGCCACTGCAAA
CTCCTCCACAGGCGTCCCCGTGCTGCAGATCTTCTACGACTCAACCCATA
GCAAAGTCGCCGCCTGCTTCATGACCACTGGAGTGCATTGAGCGGTGTAT
TCATCATTGGAGTAGATGCCGGTGGTCCACCGGTTATGCTCTTCGGATGG
TTAGGCGTGTGTGTAATTACTTTTGCGGTTGCCCTATCCATGGCAGAATG
GTGCTCAAGGTGGCCCGTGGCCGGAGGGCAGTATTCATGGGTCTTTCTGC
TGGCTCCACCAAAGATCGCTCGAGAGATGTCGTATATAACGGGGTGGTTC
ATGCTAATGGAATTCAAGCGGTCGTTCGGCCTCTTGGATATGATAGGTTT
CAGTTTTAGCATCGTTACTTGATGTCTGTGGCGCCCAAAGATGTCTTCGG
CCATGGCACCGAAGAAGACCTCACGCTTGAGCACTTGGGTTATCAGCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006865amino acid transport
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010201CBS51388_010201Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010201-T1CBS51388_010201-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010201-T1.cdsCBS51388_010201-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010201-T1.exon5CBS51388_010201-T1.exon5Aspergillus niger CBS 513.88exon
CBS51388_010201-T1.exon4CBS51388_010201-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_010201-T1.exon3CBS51388_010201-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_010201-T1.exon2CBS51388_010201-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010201-T1.exon1CBS51388_010201-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR004840
DBxrefInterPro:IPR002293
DBxrefPFAM:PF13520
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:1196257..1198085 -
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