You are here

Home

CBS51388_010204-T1, CBS51388_010204-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010204-T1
Unique NameCBS51388_010204-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:1202470..1203746-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010204-T1 ID=CBS51388_010204-T1|Name=CBS51388_010204-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1277bp|location=Sequence derived from alignment at An16:1202470..1203746- (Aspergillus niger CBS 513.88)
ATGGCTTCTCCGCGTGAGTTCCCTTGCCACCGCCTCTTCACATGCACTAT
GTAGTCCGCCGACATCTCCAGTGCTTTTGAATGCTAACGACAAATTGTTC
TTGTAGAGAAGATCCGCACTACCCTTACTGATCTACTCAAGATCAACCAC
CCCGTCTTCCTGGCGGGTATGAACGTGGCCGCCGGTCCCAAATTGGCTGC
TGCGGTCACCAACGCCGGTGGTCTGGGAGTTATCGGAGGTGTTGGATACA
CCCCCGACATGCTCCGTGAGCAGATTGCAGAGCTCAAGAGCTTTTTGAAT
GACAAGAACGCTCCCTTTGGAGTTGACTTGCTGCTCCCCCAGGTCGGTGG
AAGCGCCCGCAAGACCAAGTGAGACACCCATGTGATTGTTTGACAAACGG
AAACTCGAGATACTAATGCGCCTTCTGTGCATCAGCTACGACTACACCAA
GGGCAAGCTCAATGAACTCGTGGATATCATCATCGAAAGCGGTGCAAAGC
TCTTCGTCTCTGCCGTCGGTATCCCCCCCAAAGCTGTCGTGGACAAACTC
CATGCTGCAGGCATCCTGTACATGAACATGATCGGTCACCCCAAGCACGT
CCAGAAGTCCCTCGATGCCGGTGCGGATATCATTTGCGCTCAGGGTGGTG
AAGGAGGTGGTCACACTGGCGATGTTCCCACCACGATTCTCATTCCTACC
GTGGCCAAGCTCTGCCAGGGCAAGAAGAGTCCCCTGACTGGTCTGCCCGT
GCAGGTGGTTGCTGCCGGTGGCTTGTACAATGGCAACTCGGTGGCTGCTG
CCTTGATGCTTGGTGCTTCGGCCGTGTGGATTGGTACTCGTTTCATCCTG
GCTGATGAGGCTGGTGCTCCCAAGGCTCACCAGGAGGCTGTCCGTACCGC
TGGCTTTGATGACACAATCCGCACTATTATCTTCACGGTAAGTTCAACCA
AACACTACTCCTATATCATATTCTAAATCTGCCCAGGGCCGCCCACTCCG
TGTCCGTAACAACGAATACATCAAGAACTGGGAGGAGAACCGCCAAGATG
AGATCAAGAAGCTCACCTCCCAGGGAATTATTCCGGCTGAGCACGACATG
GAGAACCTCCCTGATGATGTTGACGACGAGACCCTTGAAAACGCTCGCCC
CTTCCTGATGGGCAAGGTTGCTGCTGTTGTAAACGAAAAGAAGCCTGCCA
AGGCTATTGTTGATGAGCTCGTGGACGATGCTGCTGCACTGTTGCAGAAG
GGCAACAAGATGTTGGCGAAGTTGTAA
back to top

Coding sequence (CDS) from alignment at An16:1202470..1203746-

>CBS51388_010204-T1 ID=CBS51388_010204-T1|Name=CBS51388_010204-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4272bp|location=Sequence derived from alignment at An16:1202470..1203746- (Aspergillus niger CBS 513.88)
GGCCGCCCACTCCGTGTCCGTAACAACGAATACATCAAGAACTGGGAGGA
GAACCGCCAAGATGAGATCAAGAAGCTCACCTCCCAGGGAATTATTCCGG
CTGAGCACGACATGGAGAACCTCCCTGATGATGTTGACGACGAGACCCTT
GAAAACGCTCGCCCCTTCCTGATGGGCAAGGTTGCTGCTGTTGTAAACGA
AAAGAAGCCTGCCAAGGCTATTGTTGATGAGCTCGTGGACGATGCTGCTG
CACTGTTGCAGAAGGGCAACAAGATGTTGGCGAAGTTGTAACTACGACTA
CACCAAGGGCAAGCTCAATGAACTCGTGGATATCATCATCGAAAGCGGTG
CAAAGCTCTTCGTCTCTGCCGTCGGTATCCCCCCCAAAGCTGTCGTGGAC
AAACTCCATGCTGCAGGCATCCTGTACATGAACATGATCGGTCACCCCAA
GCACGTCCAGAAGTCCCTCGATGCCGGTGCGGATATCATTTGCGCTCAGG
GTGGTGAAGGAGGTGGTCACACTGGCGATGTTCCCACCACGATTCTCATT
CCTACCGTGGCCAAGCTCTGCCAGGGCAAGAAGAGTCCCCTGACTGGTCT
GCCCGTGCAGGTGGTTGCTGCCGGTGGCTTGTACAATGGCAACTCGGTGG
CTGCTGCCTTGATGCTTGGTGCTTCGGCCGTGTGGATTGGTACTCGTTTC
ATCCTGGCTGATGAGGCTGGTGCTCCCAAGGCTCACCAGGAGGCTGTCCG
TACCGCTGGCTTTGATGACACAATCCGCACTATTATCTTCACGAGAAGAT
CCGCACTACCCTTACTGATCTACTCAAGATCAACCACCCCGTCTTCCTGG
CGGGTATGAACGTGGCCGCCGGTCCCAAATTGGCTGCTGCGGTCACCAAC
GCCGGTGGTCTGGGAGTTATCGGAGGTGTTGGATACACCCCCGACATGCT
CCGTGAGCAGATTGCAGAGCTCAAGAGCTTTTTGAATGACAAGAACGCTC
CCTTTGGAGTTGACTTGCTGCTCCCCCAGGTCGGTGGAAGCGCCCGCAAG
ACCAAATGGCTTCTCCGCGGCCGCCCACTCCGTGTCCGTAACAACGAATA
CATCAAGAACTGGGAGGAGAACCGCCAAGATGAGATCAAGAAGCTCACCT
CCCAGGGAATTATTCCGGCTGAGCACGACATGGAGAACCTCCCTGATGAT
GTTGACGACGAGACCCTTGAAAACGCTCGCCCCTTCCTGATGGGCAAGGT
TGCTGCTGTTGTAAACGAAAAGAAGCCTGCCAAGGCTATTGTTGATGAGC
TCGTGGACGATGCTGCTGCACTGTTGCAGAAGGGCAACAAGATGTTGGCG
AAGTTGTAACTACGACTACACCAAGGGCAAGCTCAATGAACTCGTGGATA
TCATCATCGAAAGCGGTGCAAAGCTCTTCGTCTCTGCCGTCGGTATCCCC
CCCAAAGCTGTCGTGGACAAACTCCATGCTGCAGGCATCCTGTACATGAA
CATGATCGGTCACCCCAAGCACGTCCAGAAGTCCCTCGATGCCGGTGCGG
ATATCATTTGCGCTCAGGGTGGTGAAGGAGGTGGTCACACTGGCGATGTT
CCCACCACGATTCTCATTCCTACCGTGGCCAAGCTCTGCCAGGGCAAGAA
GAGTCCCCTGACTGGTCTGCCCGTGCAGGTGGTTGCTGCCGGTGGCTTGT
ACAATGGCAACTCGGTGGCTGCTGCCTTGATGCTTGGTGCTTCGGCCGTG
TGGATTGGTACTCGTTTCATCCTGGCTGATGAGGCTGGTGCTCCCAAGGC
TCACCAGGAGGCTGTCCGTACCGCTGGCTTTGATGACACAATCCGCACTA
TTATCTTCACGAGAAGATCCGCACTACCCTTACTGATCTACTCAAGATCA
ACCACCCCGTCTTCCTGGCGGGTATGAACGTGGCCGCCGGTCCCAAATTG
GCTGCTGCGGTCACCAACGCCGGTGGTCTGGGAGTTATCGGAGGTGTTGG
ATACACCCCCGACATGCTCCGTGAGCAGATTGCAGAGCTCAAGAGCTTTT
TGAATGACAAGAACGCTCCCTTTGGAGTTGACTTGCTGCTCCCCCAGGTC
GGTGGAAGCGCCCGCAAGACCAAATGGCTTCTCCGCGGCCGCCCACTCCG
TGTCCGTAACAACGAATACATCAAGAACTGGGAGGAGAACCGCCAAGATG
AGATCAAGAAGCTCACCTCCCAGGGAATTATTCCGGCTGAGCACGACATG
GAGAACCTCCCTGATGATGTTGACGACGAGACCCTTGAAAACGCTCGCCC
CTTCCTGATGGGCAAGGTTGCTGCTGTTGTAAACGAAAAGAAGCCTGCCA
AGGCTATTGTTGATGAGCTCGTGGACGATGCTGCTGCACTGTTGCAGAAG
GGCAACAAGATGTTGGCGAAGTTGTAACTACGACTACACCAAGGGCAAGC
TCAATGAACTCGTGGATATCATCATCGAAAGCGGTGCAAAGCTCTTCGTC
TCTGCCGTCGGTATCCCCCCCAAAGCTGTCGTGGACAAACTCCATGCTGC
AGGCATCCTGTACATGAACATGATCGGTCACCCCAAGCACGTCCAGAAGT
CCCTCGATGCCGGTGCGGATATCATTTGCGCTCAGGGTGGTGAAGGAGGT
GGTCACACTGGCGATGTTCCCACCACGATTCTCATTCCTACCGTGGCCAA
GCTCTGCCAGGGCAAGAAGAGTCCCCTGACTGGTCTGCCCGTGCAGGTGG
TTGCTGCCGGTGGCTTGTACAATGGCAACTCGGTGGCTGCTGCCTTGATG
CTTGGTGCTTCGGCCGTGTGGATTGGTACTCGTTTCATCCTGGCTGATGA
GGCTGGTGCTCCCAAGGCTCACCAGGAGGCTGTCCGTACCGCTGGCTTTG
ATGACACAATCCGCACTATTATCTTCACGAGAAGATCCGCACTACCCTTA
CTGATCTACTCAAGATCAACCACCCCGTCTTCCTGGCGGGTATGAACGTG
GCCGCCGGTCCCAAATTGGCTGCTGCGGTCACCAACGCCGGTGGTCTGGG
AGTTATCGGAGGTGTTGGATACACCCCCGACATGCTCCGTGAGCAGATTG
CAGAGCTCAAGAGCTTTTTGAATGACAAGAACGCTCCCTTTGGAGTTGAC
TTGCTGCTCCCCCAGGTCGGTGGAAGCGCCCGCAAGACCAAATGGCTTCT
CCGCGGCCGCCCACTCCGTGTCCGTAACAACGAATACATCAAGAACTGGG
AGGAGAACCGCCAAGATGAGATCAAGAAGCTCACCTCCCAGGGAATTATT
CCGGCTGAGCACGACATGGAGAACCTCCCTGATGATGTTGACGACGAGAC
CCTTGAAAACGCTCGCCCCTTCCTGATGGGCAAGGTTGCTGCTGTTGTAA
ACGAAAAGAAGCCTGCCAAGGCTATTGTTGATGAGCTCGTGGACGATGCT
GCTGCACTGTTGCAGAAGGGCAACAAGATGTTGGCGAAGTTGTAACTACG
ACTACACCAAGGGCAAGCTCAATGAACTCGTGGATATCATCATCGAAAGC
GGTGCAAAGCTCTTCGTCTCTGCCGTCGGTATCCCCCCCAAAGCTGTCGT
GGACAAACTCCATGCTGCAGGCATCCTGTACATGAACATGATCGGTCACC
CCAAGCACGTCCAGAAGTCCCTCGATGCCGGTGCGGATATCATTTGCGCT
CAGGGTGGTGAAGGAGGTGGTCACACTGGCGATGTTCCCACCACGATTCT
CATTCCTACCGTGGCCAAGCTCTGCCAGGGCAAGAAGAGTCCCCTGACTG
GTCTGCCCGTGCAGGTGGTTGCTGCCGGTGGCTTGTACAATGGCAACTCG
GTGGCTGCTGCCTTGATGCTTGGTGCTTCGGCCGTGTGGATTGGTACTCG
TTTCATCCTGGCTGATGAGGCTGGTGCTCCCAAGGCTCACCAGGAGGCTG
TCCGTACCGCTGGCTTTGATGACACAATCCGCACTATTATCTTCACGAGA
AGATCCGCACTACCCTTACTGATCTACTCAAGATCAACCACCCCGTCTTC
CTGGCGGGTATGAACGTGGCCGCCGGTCCCAAATTGGCTGCTGCGGTCAC
CAACGCCGGTGGTCTGGGAGTTATCGGAGGTGTTGGATACACCCCCGACA
TGCTCCGTGAGCAGATTGCAGAGCTCAAGAGCTTTTTGAATGACAAGAAC
GCTCCCTTTGGAGTTGACTTGCTGCTCCCCCAGGTCGGTGGAAGCGCCCG
CAAGACCAAATGGCTTCTCCGC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0018580nitronate monooxygenase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010204CBS51388_010204Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010204-T1CBS51388_010204-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010204-T1.cdsCBS51388_010204-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010204-T1.exon4CBS51388_010204-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_010204-T1.exon3CBS51388_010204-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_010204-T1.exon2CBS51388_010204-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010204-T1.exon1CBS51388_010204-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR004136
DBxrefPFAM:PF03060
DBxrefPFAM:PF00478
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:1202470..1203746 -
Powered by Drupal