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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:1211892..1213437- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010209-T1 ID=CBS51388_010209-T1|Name=CBS51388_010209-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1546bp|location=Sequence derived from alignment at An16:1211892..1213437- (Aspergillus niger CBS 513.88)
ATGGTCAAGATCACAAGTTTCACCACGAGGGACGTGAGGTTTCCCGTAAG
TCGCGCACCTATCCTCTCAAGTTCACCCATGTATTTTGCATACCTGCTCA
CCAAATGACAGACCTCCCTCGATAAAACCGGCTCAGATGCCATGAACGCT
GCAGGCGACTACTCCTCCGCCTACTGCATCATCTACACTGACTCCGACTA
CACCGGCCACGGCATGGTACGCACATGACCAACCCTACCTCCACCTTCTC
AGAAACATTCACTAACAATCCTAGACCTTCACCATCGGCCGCGGCAATGA
AATCGTCTGCTCCGCCATCTCCCTCCTCGCTCCCCTCGTGGTCGGCAAAG
ACCTCGACGAACTTACCGCCGACTGGGGCAAGACCTGGCGCTACCTCGTC
TCCGACAGCCAACTGCGCTGGATCGGACCCGAGAAGGGTGTCATCCACCT
GGCCCTTGGTGCCGTCGTCAACGCTCTCTGGGATCTCTGGGCCAAGACCC
TGAACAAACCTGTCTGGCGCATTGTCGCGGACATGACCCCCGAGGAGTTT
GTTCGCTGCATTGACTTCCGCTACATCACGGACGCCATTACACCCGAGGA
GGCAATTGCCCTCCTCAAGGAGGTCGAGGCCGGCAAGCAGGACCGTATCA
AGGAAGCAGAGCAGAGCCAGGCTGTACCGGCCTATACTACCAGTGCGGGT
TGGCTGGGATACAGTGAGGAAAAGCTGAAAGTCCTTCTCAAGGAGAGCGT
CGAGCAGGGATACAAGCACTTTAAGCTGAAGGTTGGCGGAAACGTCGAGG
AAGACCGGAGGAGATTGGCTATTGCTCGTGAAGCTATTGGTTATGACAAG
GGCAACATTCTTATGGTTGATGCCAACCAGGTACCTACCTCCCCACTTCC
ATCCCTACCACCCACAATGCTAACACCTCATGTGAAAAAACAGGTCTGGT
CCGTCCCCGAAGCCATCACCTGGATGCAACAACTCGCCGAATTCAAGCCT
TGGTTCATCGAAGAGCCCACCTCCCCCGACGACATCCTCGGCCACGCCGC
CATCAAGAAGGCCCTCCAAGACACCCCCTACGGCCCCATCGGCGTCGCCA
CTGGCGAAATGTGCCAGAACCGCGTTGTCTTCAAGCAGCTCCTGCAGGCA
GGAGCCCTGACCGTCCTGCAAGCCGATGCCTGCCGTGTCGGCGGTGTCAA
TGAAGTTCTGGCCATCTTGCTGCTTGCGCGCAAGTTCGGCGTGCCGATCG
TGCCTCACTCCGGTGGTGTCGGGTTGCCTGAGTACACTCAGCATCTGAGC
ACGATCGACTACGTGGTGGTCAGTGGAAAGAAGAGTGTGTTGGAGTATGT
GGATCACTTGCACGAGCACTTCGTGCACCCGTCTAGTGTCAAGGATGGAT
ACTATGTTACTCCGATGGAGCCGGGGTATAGTGTTGAGATGAAGGCGGAG
AGCATGGATGCGTTTTCGTTCCCTGGTGAGGAGGGCAAGAGTTGGTGGAG
GTCGGAGGAGGCGAAGACCATTCTGGAGGGGCCCCGGATAGTATAG back to topCoding sequence (CDS) from alignment at An16:1211892..1213437- >CBS51388_010209-T1 ID=CBS51388_010209-T1|Name=CBS51388_010209-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5436bp|location=Sequence derived from alignment at An16:1211892..1213437- (Aspergillus niger CBS 513.88)
GTCTGGTCCGTCCCCGAAGCCATCACCTGGATGCAACAACTCGCCGAATT
CAAGCCTTGGTTCATCGAAGAGCCCACCTCCCCCGACGACATCCTCGGCC
ACGCCGCCATCAAGAAGGCCCTCCAAGACACCCCCTACGGCCCCATCGGC
GTCGCCACTGGCGAAATGTGCCAGAACCGCGTTGTCTTCAAGCAGCTCCT
GCAGGCAGGAGCCCTGACCGTCCTGCAAGCCGATGCCTGCCGTGTCGGCG
GTGTCAATGAAGTTCTGGCCATCTTGCTGCTTGCGCGCAAGTTCGGCGTG
CCGATCGTGCCTCACTCCGGTGGTGTCGGGTTGCCTGAGTACACTCAGCA
TCTGAGCACGATCGACTACGTGGTGGTCAGTGGAAAGAAGAGTGTGTTGG
AGTATGTGGATCACTTGCACGAGCACTTCGTGCACCCGTCTAGTGTCAAG
GATGGATACTATGTTACTCCGATGGAGCCGGGGTATAGTGTTGAGATGAA
GGCGGAGAGCATGGATGCGTTTTCGTTCCCTGGTGAGGAGGGCAAGAGTT
GGTGGAGGTCGGAGGAGGCGAAGACCATTCTGGAGGGGCCCCGGATAGTA
TAGACCTTCACCATCGGCCGCGGCAATGAAATCGTCTGCTCCGCCATCTC
CCTCCTCGCTCCCCTCGTGGTCGGCAAAGACCTCGACGAACTTACCGCCG
ACTGGGGCAAGACCTGGCGCTACCTCGTCTCCGACAGCCAACTGCGCTGG
ATCGGACCCGAGAAGGGTGTCATCCACCTGGCCCTTGGTGCCGTCGTCAA
CGCTCTCTGGGATCTCTGGGCCAAGACCCTGAACAAACCTGTCTGGCGCA
TTGTCGCGGACATGACCCCCGAGGAGTTTGTTCGCTGCATTGACTTCCGC
TACATCACGGACGCCATTACACCCGAGGAGGCAATTGCCCTCCTCAAGGA
GGTCGAGGCCGGCAAGCAGGACCGTATCAAGGAAGCAGAGCAGAGCCAGG
CTGTACCGGCCTATACTACCAGTGCGGGTTGGCTGGGATACAGTGAGGAA
AAGCTGAAAGTCCTTCTCAAGGAGAGCGTCGAGCAGGGATACAAGCACTT
TAAGCTGAAGGTTGGCGGAAACGTCGAGGAAGACCGGAGGAGATTGGCTA
TTGCTCGTGAAGCTATTGGTTATGACAAGGGCAACATTCTTATGGTTGAT
GCCAACCAGACCTCCCTCGATAAAACCGGCTCAGATGCCATGAACGCTGC
AGGCGACTACTCCTCCGCCTACTGCATCATCTACACTGACTCCGACTACA
CCGGCCACGGCATGATGGTCAAGATCACAAGTTTCACCACGAGGGACGTG
AGGTTTCCCGTCTGGTCCGTCCCCGAAGCCATCACCTGGATGCAACAACT
CGCCGAATTCAAGCCTTGGTTCATCGAAGAGCCCACCTCCCCCGACGACA
TCCTCGGCCACGCCGCCATCAAGAAGGCCCTCCAAGACACCCCCTACGGC
CCCATCGGCGTCGCCACTGGCGAAATGTGCCAGAACCGCGTTGTCTTCAA
GCAGCTCCTGCAGGCAGGAGCCCTGACCGTCCTGCAAGCCGATGCCTGCC
GTGTCGGCGGTGTCAATGAAGTTCTGGCCATCTTGCTGCTTGCGCGCAAG
TTCGGCGTGCCGATCGTGCCTCACTCCGGTGGTGTCGGGTTGCCTGAGTA
CACTCAGCATCTGAGCACGATCGACTACGTGGTGGTCAGTGGAAAGAAGA
GTGTGTTGGAGTATGTGGATCACTTGCACGAGCACTTCGTGCACCCGTCT
AGTGTCAAGGATGGATACTATGTTACTCCGATGGAGCCGGGGTATAGTGT
TGAGATGAAGGCGGAGAGCATGGATGCGTTTTCGTTCCCTGGTGAGGAGG
GCAAGAGTTGGTGGAGGTCGGAGGAGGCGAAGACCATTCTGGAGGGGCCC
CGGATAGTATAGACCTTCACCATCGGCCGCGGCAATGAAATCGTCTGCTC
CGCCATCTCCCTCCTCGCTCCCCTCGTGGTCGGCAAAGACCTCGACGAAC
TTACCGCCGACTGGGGCAAGACCTGGCGCTACCTCGTCTCCGACAGCCAA
CTGCGCTGGATCGGACCCGAGAAGGGTGTCATCCACCTGGCCCTTGGTGC
CGTCGTCAACGCTCTCTGGGATCTCTGGGCCAAGACCCTGAACAAACCTG
TCTGGCGCATTGTCGCGGACATGACCCCCGAGGAGTTTGTTCGCTGCATT
GACTTCCGCTACATCACGGACGCCATTACACCCGAGGAGGCAATTGCCCT
CCTCAAGGAGGTCGAGGCCGGCAAGCAGGACCGTATCAAGGAAGCAGAGC
AGAGCCAGGCTGTACCGGCCTATACTACCAGTGCGGGTTGGCTGGGATAC
AGTGAGGAAAAGCTGAAAGTCCTTCTCAAGGAGAGCGTCGAGCAGGGATA
CAAGCACTTTAAGCTGAAGGTTGGCGGAAACGTCGAGGAAGACCGGAGGA
GATTGGCTATTGCTCGTGAAGCTATTGGTTATGACAAGGGCAACATTCTT
ATGGTTGATGCCAACCAGACCTCCCTCGATAAAACCGGCTCAGATGCCAT
GAACGCTGCAGGCGACTACTCCTCCGCCTACTGCATCATCTACACTGACT
CCGACTACACCGGCCACGGCATGATGGTCAAGATCACAAGTTTCACCACG
AGGGACGTGAGGTTTCCCGTCTGGTCCGTCCCCGAAGCCATCACCTGGAT
GCAACAACTCGCCGAATTCAAGCCTTGGTTCATCGAAGAGCCCACCTCCC
CCGACGACATCCTCGGCCACGCCGCCATCAAGAAGGCCCTCCAAGACACC
CCCTACGGCCCCATCGGCGTCGCCACTGGCGAAATGTGCCAGAACCGCGT
TGTCTTCAAGCAGCTCCTGCAGGCAGGAGCCCTGACCGTCCTGCAAGCCG
ATGCCTGCCGTGTCGGCGGTGTCAATGAAGTTCTGGCCATCTTGCTGCTT
GCGCGCAAGTTCGGCGTGCCGATCGTGCCTCACTCCGGTGGTGTCGGGTT
GCCTGAGTACACTCAGCATCTGAGCACGATCGACTACGTGGTGGTCAGTG
GAAAGAAGAGTGTGTTGGAGTATGTGGATCACTTGCACGAGCACTTCGTG
CACCCGTCTAGTGTCAAGGATGGATACTATGTTACTCCGATGGAGCCGGG
GTATAGTGTTGAGATGAAGGCGGAGAGCATGGATGCGTTTTCGTTCCCTG
GTGAGGAGGGCAAGAGTTGGTGGAGGTCGGAGGAGGCGAAGACCATTCTG
GAGGGGCCCCGGATAGTATAGACCTTCACCATCGGCCGCGGCAATGAAAT
CGTCTGCTCCGCCATCTCCCTCCTCGCTCCCCTCGTGGTCGGCAAAGACC
TCGACGAACTTACCGCCGACTGGGGCAAGACCTGGCGCTACCTCGTCTCC
GACAGCCAACTGCGCTGGATCGGACCCGAGAAGGGTGTCATCCACCTGGC
CCTTGGTGCCGTCGTCAACGCTCTCTGGGATCTCTGGGCCAAGACCCTGA
ACAAACCTGTCTGGCGCATTGTCGCGGACATGACCCCCGAGGAGTTTGTT
CGCTGCATTGACTTCCGCTACATCACGGACGCCATTACACCCGAGGAGGC
AATTGCCCTCCTCAAGGAGGTCGAGGCCGGCAAGCAGGACCGTATCAAGG
AAGCAGAGCAGAGCCAGGCTGTACCGGCCTATACTACCAGTGCGGGTTGG
CTGGGATACAGTGAGGAAAAGCTGAAAGTCCTTCTCAAGGAGAGCGTCGA
GCAGGGATACAAGCACTTTAAGCTGAAGGTTGGCGGAAACGTCGAGGAAG
ACCGGAGGAGATTGGCTATTGCTCGTGAAGCTATTGGTTATGACAAGGGC
AACATTCTTATGGTTGATGCCAACCAGACCTCCCTCGATAAAACCGGCTC
AGATGCCATGAACGCTGCAGGCGACTACTCCTCCGCCTACTGCATCATCT
ACACTGACTCCGACTACACCGGCCACGGCATGATGGTCAAGATCACAAGT
TTCACCACGAGGGACGTGAGGTTTCCCGTCTGGTCCGTCCCCGAAGCCAT
CACCTGGATGCAACAACTCGCCGAATTCAAGCCTTGGTTCATCGAAGAGC
CCACCTCCCCCGACGACATCCTCGGCCACGCCGCCATCAAGAAGGCCCTC
CAAGACACCCCCTACGGCCCCATCGGCGTCGCCACTGGCGAAATGTGCCA
GAACCGCGTTGTCTTCAAGCAGCTCCTGCAGGCAGGAGCCCTGACCGTCC
TGCAAGCCGATGCCTGCCGTGTCGGCGGTGTCAATGAAGTTCTGGCCATC
TTGCTGCTTGCGCGCAAGTTCGGCGTGCCGATCGTGCCTCACTCCGGTGG
TGTCGGGTTGCCTGAGTACACTCAGCATCTGAGCACGATCGACTACGTGG
TGGTCAGTGGAAAGAAGAGTGTGTTGGAGTATGTGGATCACTTGCACGAG
CACTTCGTGCACCCGTCTAGTGTCAAGGATGGATACTATGTTACTCCGAT
GGAGCCGGGGTATAGTGTTGAGATGAAGGCGGAGAGCATGGATGCGTTTT
CGTTCCCTGGTGAGGAGGGCAAGAGTTGGTGGAGGTCGGAGGAGGCGAAG
ACCATTCTGGAGGGGCCCCGGATAGTATAGACCTTCACCATCGGCCGCGG
CAATGAAATCGTCTGCTCCGCCATCTCCCTCCTCGCTCCCCTCGTGGTCG
GCAAAGACCTCGACGAACTTACCGCCGACTGGGGCAAGACCTGGCGCTAC
CTCGTCTCCGACAGCCAACTGCGCTGGATCGGACCCGAGAAGGGTGTCAT
CCACCTGGCCCTTGGTGCCGTCGTCAACGCTCTCTGGGATCTCTGGGCCA
AGACCCTGAACAAACCTGTCTGGCGCATTGTCGCGGACATGACCCCCGAG
GAGTTTGTTCGCTGCATTGACTTCCGCTACATCACGGACGCCATTACACC
CGAGGAGGCAATTGCCCTCCTCAAGGAGGTCGAGGCCGGCAAGCAGGACC
GTATCAAGGAAGCAGAGCAGAGCCAGGCTGTACCGGCCTATACTACCAGT
GCGGGTTGGCTGGGATACAGTGAGGAAAAGCTGAAAGTCCTTCTCAAGGA
GAGCGTCGAGCAGGGATACAAGCACTTTAAGCTGAAGGTTGGCGGAAACG
TCGAGGAAGACCGGAGGAGATTGGCTATTGCTCGTGAAGCTATTGGTTAT
GACAAGGGCAACATTCTTATGGTTGATGCCAACCAGACCTCCCTCGATAA
AACCGGCTCAGATGCCATGAACGCTGCAGGCGACTACTCCTCCGCCTACT
GCATCATCTACACTGACTCCGACTACACCGGCCACGGCATGATGGTCAAG
ATCACAAGTTTCACCACGAGGGACGTGAGGTTTCCC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009063 | cellular amino acid catabolic process |
| GO:0016052 | carbohydrate catabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0050023 | L-fuconate dehydratase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018110 |
| DBxref | InterPro:IPR034610 |
| DBxref | InterPro:IPR036849 |
| DBxref | InterPro:IPR029065 |
| DBxref | InterPro:IPR013341 |
| DBxref | InterPro:IPR029017 |
| DBxref | InterPro:IPR013342 |
| DBxref | PFAM:PF02746 |
| DBxref | PFAM:PF13378 |
| Product | L-galactonate dehydratase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:1211892..1213437 - |
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