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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:1293562..1295827+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010236-T1 ID=CBS51388_010236-T1|Name=CBS51388_010236-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2266bp|location=Sequence derived from alignment at An16:1293562..1295827+ (Aspergillus niger CBS 513.88)
ATGTCGGCCTCTCTGCCCTCTAGCTACCGTTCCCTCAATTTACCCAATTC
CCTGCCGCCGCTAAATCAGTCGTGTGAGAGTTGTAGGGCGCTCAAAGTAC
GCTGTTTGCCGGATCCCAACGTCCCGCGCCAGTGTCAGCGCTGTACTCGC
ACGAGAAGAACCTGCGTGTTTGCCCGCACGCTCCGACGACAGCCACGGAA
GAAGACTGGCTCACGAGTGGCCCAGTTGGAAAGGGACGTGCGAGACTTGC
GCTCGCTGTTACATGATCAGATCAGATCTGATCCAGACCGGGGGGAGAAG
ACAGATGATGCCGCGGCCGCTGCCACAACCACCGATCCTCCGGGGGCGGC
TGGCCGCGACGTAGCTTCCTTTCCCGCCCTCTCATCATCTATGCACATGG
AGCTCCCTAGTGTCCACAACACCTCTGCTCAGGGTGACTCAGATCAGCAT
GCTAGAAATTTACCTGCCGAGACTGCTCCCACCAGCACTAACCTGACCAT
GATGCAGTCGACAGCTGGCTCTGGGGACGTGGTCGATCGCGGCATTATAT
CGCTTGACATGGCGCAAATGTTGGTCTCATTCTTTGTCAACGAACAAATG
CAATTCTACCCAATGGTTGTGCTGCCACCAAACACAAGTGCGGAATCACT
GCGCAGAACGAGCCCCGTACTCTTCCTGTCTATTCTAGCTGCTTCATCAA
TGACCTTAAACCCTCACATTTCGGAGACTCTGAACGAGGAGATGCTCAAG
CTATTTGCAGACCGTTTTTTCCTCAGGCAGGAGAAATCAGTGGAGCTGAT
TCAATCAATCCTCTTGATGCTTATCTTCTACTTCCCCCCAAAGTCACGCT
TACAAGGCCAATATTACCAATACACACACATTGCGACCACCATGACCCTA
GAACTTGGTATATCAGCCGGACCAGCGGGACGAAAAAACTACCGTTGTCA
TGGCGGGTATGGTGATTTACCAGCTTCCATCCATAGTGCTCAGGCGCGAG
CCGTACTGGGCTGCTATCACTTCGCGTCCAAGTATGGACTCTATGTTTAC
CACGTAGTCGATACACGACTGACCTAGCCGTAGCATAGGAATTCGAACAC
ACCGACCGAATATGCTCCGCTTCAACGATGTGATAGACGGGTACATATGC
CACCTCAGAGAATCTACAAACGGACTGGACCAGCAAATAGCGACATGGTT
TGACATTCAACGGATCGTTGACGATACACTATACTCACTGGGCCACGACA
ATACCCTAGTGGACGTTCATTTTCGTGAGTCGCAGATGCTTCCAATCCTG
AAATGGTTTGATTCTCGAATGTTGCGCTGGAAGAGGACGACCCCGAAAAA
CATGCTCACAAGTAAGTTGCATCCATACATTTATCGAACTGTACTCATAC
TATTACTCACAGCATGGATGAACCTCGAATATCACTACATGTACCTCGCC
ATCTACGAACTTGCCGCTGGTGAAGGCTACCGCGATCCCGACGCCCCCAC
CCGCAAATATTACACTCTCCCACCCTTGGAAGGCGACATGGAACGACACA
AAGCAAACGTGCCCTTAAGTGCTGCACGAGTCCAGATAATAACGAAGTGG
ATGCTTGCCGCCCACCAGATGCTGGACGCCTTCTTGAAATGCGACACTTC
CACCATGCGCAAGCTACCTAACATGACCTATACACGGATGGTCCTGGGCA
TCTCATCCCTACTCCGGATATATCACACAGCCCAATTTGGCCCTCTCGGT
GAGGTTATTACTTCAAATATGATGGACGTTGATGGCTACCTGGACCGCGT
ATCAGAAGCTCTTTCACGAGCGAGTGGAGAGCAGAAGTACCGCGTCCCCA
GCAAATGGTATCACGTTGTTGCGATCAAAAATCGAGAGTGGTATGAACAG
CTCCAGAAACGGATAATTGCTCGTCCGGGTGATACGCATACCTATCTACG
TGGCGGGGTTCCCCCACCAGCGCCGGGTGTCCCCATTTTGGAACCTCACA
GGGGCCCAGGCTCAGCTGCCATACTACCCTCACTCGGGAGTGGCATGGCA
GGTCCCGCATATGCTGAACCATGGTATGTAGATGATGCCGCAGGAAGGGT
TGATCCGTCACGGCCTTTCCCTGCTATGAATGCACCAGTCTTGTATATGG
GTCAGATGCAGCCTGTAGAAGGAGATATCAATGAGGCCGCGTTTCCATTA
CCGTTGGGTGACGAACCGTGGCGGTTGGATGAGTCGATACAGGACAGCGT
GACATTCCCATATTGA back to topCoding sequence (CDS) from alignment at An16:1293562..1295827+ >CBS51388_010236-T1 ID=CBS51388_010236-T1|Name=CBS51388_010236-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6489bp|location=Sequence derived from alignment at An16:1293562..1295827+ (Aspergillus niger CBS 513.88)
ATGTCGGCCTCTCTGCCCTCTAGCTACCGTTCCCTCAATTTACCCAATTC
CCTGCCGCCGCTAAATCAGTCGTGTGAGAGTTGTAGGGCGCTCAAAGTAC
GCTGTTTGCCGGATCCCAACGTCCCGCGCCAGTGTCAGCGCTGTACTCGC
ACGAGAAGAACCTGCGTGTTTGCCCGCACGCTCCGACGACAGCCACGGAA
GAAGACTGGCTCACGAGTGGCCCAGTTGGAAAGGGACGTGCGAGACTTGC
GCTCGCTGTTACATGATCAGATCAGATCTGATCCAGACCGGGGGGAGAAG
ACAGATGATGCCGCGGCCGCTGCCACAACCACCGATCCTCCGGGGGCGGC
TGGCCGCGACGTAGCTTCCTTTCCCGCCCTCTCATCATCTATGCACATGG
AGCTCCCTAGTGTCCACAACACCTCTGCTCAGGGTGACTCAGATCAGCAT
GCTAGAAATTTACCTGCCGAGACTGCTCCCACCAGCACTAACCTGACCAT
GATGCAGTCGACAGCTGGCTCTGGGGACGTGGTCGATCGCGGCATTATAT
CGCTTGACATGGCGCAAATGTTGGTCTCATTCTTTGTCAACGAACAAATG
CAATTCTACCCAATGGTTGTGCTGCCACCAAACACAAGTGCGGAATCACT
GCGCAGAACGAGCCCCGTACTCTTCCTGTCTATTCTAGCTGCTTCATCAA
TGACCTTAAACCCTCACATTTCGGAGACTCTGAACGAGGAGATGCTCAAG
CTATTTGCAGACCGTTTTTTCCTCAGGCAGGAGAAATCAGTGGAGCTGAT
TCAATCAATCCTCTTGATGCTTATCTTCTACTTCCCCCCAAAGTCACGCT
TACAAGGCCAATATTACCAATACACACACATTGCGACCACCATGACCCTA
GAACTTGGTATATCAGCCGGACCAGCGGGACGAAAAAACTACCGTTGTCA
TGGCGGGTATGGTGATTTACCAGCTTCCATCCATAGTGCTCAGGCGCGAG
CCGTACTGGGCTGCTATCACTTCGCGTCCAACATAGGAATTCGAACACAC
CGACCGAATATGCTCCGCTTCAACGATGTGATAGACGGGTACATATGCCA
CCTCAGAGAATCTACAAACGGACTGGACCAGCAAATAGCGACATGGTTTG
ACATTCAACGGATCGTTGACGATACACTATACTCACTGGGCCACGACAAT
ACCCTAGTGGACGTTCATTTTCGTGAGTCGCAGATGCTTCCAATCCTGAA
ATGGTTTGATTCTCGAATGTTGCGCTGGAAGAGGACGACCCCGAAAAACA
TGCTCACAACATGGATGAACCTCGAATATCACTACATGTACCTCGCCATC
TACGAACTTGCCGCTGGTGAAGGCTACCGCGATCCCGACGCCCCCACCCG
CAAATATTACACTCTCCCACCCTTGGAAGGCGACATGGAACGACACAAAG
CAAACGTGCCCTTAAGTGCTGCACGAGTCCAGATAATAACGAAGTGGATG
CTTGCCGCCCACCAGATGCTGGACGCCTTCTTGAAATGCGACACTTCCAC
CATGCGCAAGCTACCTAACATGACCTATACACGGATGGTCCTGGGCATCT
CATCCCTACTCCGGATATATCACACAGCCCAATTTGGCCCTCTCGGTGAG
GTTATTACTTCAAATATGATGGACGTTGATGGCTACCTGGACCGCGTATC
AGAAGCTCTTTCACGAGCGAGTGGAGAGCAGAAGTACCGCGTCCCCAGCA
AATGGTATCACGTTGTTGCGATCAAAAATCGAGAGTGGTATGAACAGCTC
CAGAAACGGATAATTGCTCGTCCGGGTGATACGCATACCTATCTACGTGG
CGGGGTTCCCCCACCAGCGCCGGGTGTCCCCATTTTGGAACCTCACAGGG
GCCCAGGCTCAGCTGCCATACTACCCTCACTCGGGAGTGGCATGGCAGGT
CCCGCATATGCTGAACCATGGTATGTAGATGATGCCGCAGGAAGGGTTGA
TCCGTCACGGCCTTTCCCTGCTATGAATGCACCAGTCTTGTATATGGGTC
AGATGCAGCCTGTAGAAGGAGATATCAATGAGGCCGCGTTTCCATTACCG
TTGGGTGACGAACCGTGGCGGTTGGATGAGTCGATACAGGACAGCGTGAC
ATTCCCATATTGAATGTCGGCCTCTCTGCCCTCTAGCTACCGTTCCCTCA
ATTTACCCAATTCCCTGCCGCCGCTAAATCAGTCGTGTGAGAGTTGTAGG
GCGCTCAAAGTACGCTGTTTGCCGGATCCCAACGTCCCGCGCCAGTGTCA
GCGCTGTACTCGCACGAGAAGAACCTGCGTGTTTGCCCGCACGCTCCGAC
GACAGCCACGGAAGAAGACTGGCTCACGAGTGGCCCAGTTGGAAAGGGAC
GTGCGAGACTTGCGCTCGCTGTTACATGATCAGATCAGATCTGATCCAGA
CCGGGGGGAGAAGACAGATGATGCCGCGGCCGCTGCCACAACCACCGATC
CTCCGGGGGCGGCTGGCCGCGACGTAGCTTCCTTTCCCGCCCTCTCATCA
TCTATGCACATGGAGCTCCCTAGTGTCCACAACACCTCTGCTCAGGGTGA
CTCAGATCAGCATGCTAGAAATTTACCTGCCGAGACTGCTCCCACCAGCA
CTAACCTGACCATGATGCAGTCGACAGCTGGCTCTGGGGACGTGGTCGAT
CGCGGCATTATATCGCTTGACATGGCGCAAATGTTGGTCTCATTCTTTGT
CAACGAACAAATGCAATTCTACCCAATGGTTGTGCTGCCACCAAACACAA
GTGCGGAATCACTGCGCAGAACGAGCCCCGTACTCTTCCTGTCTATTCTA
GCTGCTTCATCAATGACCTTAAACCCTCACATTTCGGAGACTCTGAACGA
GGAGATGCTCAAGCTATTTGCAGACCGTTTTTTCCTCAGGCAGGAGAAAT
CAGTGGAGCTGATTCAATCAATCCTCTTGATGCTTATCTTCTACTTCCCC
CCAAAGTCACGCTTACAAGGCCAATATTACCAATACACACACATTGCGAC
CACCATGACCCTAGAACTTGGTATATCAGCCGGACCAGCGGGACGAAAAA
ACTACCGTTGTCATGGCGGGTATGGTGATTTACCAGCTTCCATCCATAGT
GCTCAGGCGCGAGCCGTACTGGGCTGCTATCACTTCGCGTCCAACATAGG
AATTCGAACACACCGACCGAATATGCTCCGCTTCAACGATGTGATAGACG
GGTACATATGCCACCTCAGAGAATCTACAAACGGACTGGACCAGCAAATA
GCGACATGGTTTGACATTCAACGGATCGTTGACGATACACTATACTCACT
GGGCCACGACAATACCCTAGTGGACGTTCATTTTCGTGAGTCGCAGATGC
TTCCAATCCTGAAATGGTTTGATTCTCGAATGTTGCGCTGGAAGAGGACG
ACCCCGAAAAACATGCTCACAACATGGATGAACCTCGAATATCACTACAT
GTACCTCGCCATCTACGAACTTGCCGCTGGTGAAGGCTACCGCGATCCCG
ACGCCCCCACCCGCAAATATTACACTCTCCCACCCTTGGAAGGCGACATG
GAACGACACAAAGCAAACGTGCCCTTAAGTGCTGCACGAGTCCAGATAAT
AACGAAGTGGATGCTTGCCGCCCACCAGATGCTGGACGCCTTCTTGAAAT
GCGACACTTCCACCATGCGCAAGCTACCTAACATGACCTATACACGGATG
GTCCTGGGCATCTCATCCCTACTCCGGATATATCACACAGCCCAATTTGG
CCCTCTCGGTGAGGTTATTACTTCAAATATGATGGACGTTGATGGCTACC
TGGACCGCGTATCAGAAGCTCTTTCACGAGCGAGTGGAGAGCAGAAGTAC
CGCGTCCCCAGCAAATGGTATCACGTTGTTGCGATCAAAAATCGAGAGTG
GTATGAACAGCTCCAGAAACGGATAATTGCTCGTCCGGGTGATACGCATA
CCTATCTACGTGGCGGGGTTCCCCCACCAGCGCCGGGTGTCCCCATTTTG
GAACCTCACAGGGGCCCAGGCTCAGCTGCCATACTACCCTCACTCGGGAG
TGGCATGGCAGGTCCCGCATATGCTGAACCATGGTATGTAGATGATGCCG
CAGGAAGGGTTGATCCGTCACGGCCTTTCCCTGCTATGAATGCACCAGTC
TTGTATATGGGTCAGATGCAGCCTGTAGAAGGAGATATCAATGAGGCCGC
GTTTCCATTACCGTTGGGTGACGAACCGTGGCGGTTGGATGAGTCGATAC
AGGACAGCGTGACATTCCCATATTGAATGTCGGCCTCTCTGCCCTCTAGC
TACCGTTCCCTCAATTTACCCAATTCCCTGCCGCCGCTAAATCAGTCGTG
TGAGAGTTGTAGGGCGCTCAAAGTACGCTGTTTGCCGGATCCCAACGTCC
CGCGCCAGTGTCAGCGCTGTACTCGCACGAGAAGAACCTGCGTGTTTGCC
CGCACGCTCCGACGACAGCCACGGAAGAAGACTGGCTCACGAGTGGCCCA
GTTGGAAAGGGACGTGCGAGACTTGCGCTCGCTGTTACATGATCAGATCA
GATCTGATCCAGACCGGGGGGAGAAGACAGATGATGCCGCGGCCGCTGCC
ACAACCACCGATCCTCCGGGGGCGGCTGGCCGCGACGTAGCTTCCTTTCC
CGCCCTCTCATCATCTATGCACATGGAGCTCCCTAGTGTCCACAACACCT
CTGCTCAGGGTGACTCAGATCAGCATGCTAGAAATTTACCTGCCGAGACT
GCTCCCACCAGCACTAACCTGACCATGATGCAGTCGACAGCTGGCTCTGG
GGACGTGGTCGATCGCGGCATTATATCGCTTGACATGGCGCAAATGTTGG
TCTCATTCTTTGTCAACGAACAAATGCAATTCTACCCAATGGTTGTGCTG
CCACCAAACACAAGTGCGGAATCACTGCGCAGAACGAGCCCCGTACTCTT
CCTGTCTATTCTAGCTGCTTCATCAATGACCTTAAACCCTCACATTTCGG
AGACTCTGAACGAGGAGATGCTCAAGCTATTTGCAGACCGTTTTTTCCTC
AGGCAGGAGAAATCAGTGGAGCTGATTCAATCAATCCTCTTGATGCTTAT
CTTCTACTTCCCCCCAAAGTCACGCTTACAAGGCCAATATTACCAATACA
CACACATTGCGACCACCATGACCCTAGAACTTGGTATATCAGCCGGACCA
GCGGGACGAAAAAACTACCGTTGTCATGGCGGGTATGGTGATTTACCAGC
TTCCATCCATAGTGCTCAGGCGCGAGCCGTACTGGGCTGCTATCACTTCG
CGTCCAACATAGGAATTCGAACACACCGACCGAATATGCTCCGCTTCAAC
GATGTGATAGACGGGTACATATGCCACCTCAGAGAATCTACAAACGGACT
GGACCAGCAAATAGCGACATGGTTTGACATTCAACGGATCGTTGACGATA
CACTATACTCACTGGGCCACGACAATACCCTAGTGGACGTTCATTTTCGT
GAGTCGCAGATGCTTCCAATCCTGAAATGGTTTGATTCTCGAATGTTGCG
CTGGAAGAGGACGACCCCGAAAAACATGCTCACAACATGGATGAACCTCG
AATATCACTACATGTACCTCGCCATCTACGAACTTGCCGCTGGTGAAGGC
TACCGCGATCCCGACGCCCCCACCCGCAAATATTACACTCTCCCACCCTT
GGAAGGCGACATGGAACGACACAAAGCAAACGTGCCCTTAAGTGCTGCAC
GAGTCCAGATAATAACGAAGTGGATGCTTGCCGCCCACCAGATGCTGGAC
GCCTTCTTGAAATGCGACACTTCCACCATGCGCAAGCTACCTAACATGAC
CTATACACGGATGGTCCTGGGCATCTCATCCCTACTCCGGATATATCACA
CAGCCCAATTTGGCCCTCTCGGTGAGGTTATTACTTCAAATATGATGGAC
GTTGATGGCTACCTGGACCGCGTATCAGAAGCTCTTTCACGAGCGAGTGG
AGAGCAGAAGTACCGCGTCCCCAGCAAATGGTATCACGTTGTTGCGATCA
AAAATCGAGAGTGGTATGAACAGCTCCAGAAACGGATAATTGCTCGTCCG
GGTGATACGCATACCTATCTACGTGGCGGGGTTCCCCCACCAGCGCCGGG
TGTCCCCATTTTGGAACCTCACAGGGGCCCAGGCTCAGCTGCCATACTAC
CCTCACTCGGGAGTGGCATGGCAGGTCCCGCATATGCTGAACCATGGTAT
GTAGATGATGCCGCAGGAAGGGTTGATCCGTCACGGCCTTTCCCTGCTAT
GAATGCACCAGTCTTGTATATGGGTCAGATGCAGCCTGTAGAAGGAGATA
TCAATGAGGCCGCGTTTCCATTACCGTTGGGTGACGAACCGTGGCGGTTG
GATGAGTCGATACAGGACAGCGTGACATTCCCATATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR036864 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:1293562..1295827 + |
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