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CBS51388_010248-T1, CBS51388_010248-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010248-T1
Unique NameCBS51388_010248-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:1333406..1334278+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010248-T1 ID=CBS51388_010248-T1|Name=CBS51388_010248-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=873bp|location=Sequence derived from alignment at An16:1333406..1334278+ (Aspergillus niger CBS 513.88)
ATGCCCGACAAAGACGCCGGAACGCCCCGTGTTTTCCTTTACCGCCATGG
TACCCCTCTTCCCACTATCCAACAATAATAGAATTCCCCACTAAGTATCT
TACAGGAGAGACCGAATGGTCCAAAAGCGGCCGCTACACCGGCATCAGCG
AAATCCAGCTGACTGACGACGGAGTGAAGCAAGTGTCCGCTTCCGGCAAG
ATCCTTGTAGGAGCTGGTAAGCTTATTGACACGGCTAAACTGGCTCGCGT
GTATGTGTCTCCGCGCCAAAGGGCAAAGCACACCTTTGACTTGGCCTTCG
GGGAGGCCGAGAAGCAGGGTTTGAAGGAAGCTGGCAAGGTGGAGGAGACG
GAGCGGCTGGCGGAGTGGGGTTATGGCTTGTATGAGGGGATGCTGACCAA
GGAGATTCGCGCGCTGAGGAAGGAGCATGGGCTTGACGGTGAGAGGGCGT
GGGATATCTGGAGGGATGGATGTGAGGAGGGAGAGTAAGTCATTCCTATA
ACCATGTTAGATCCGGTTCCTTTCTGTTGGAGGGGCTAACGGTATAGATC
ACCTGCGGATGTTACGGCCCGGATTGATAGCCTGATCGAAGAGATCAGAG
ATCTCCATCGGGGAAACATGCACGGAGAGGCACCTGCTGATGTTGTTCTT
ATTGCGCATGGCCATACGCTCCGTGCGTTTACCAAGCGCTGGTTGGGCTA
TCCGATGGAGTTTCCGTTGTCGATGATGCTGGAGCCTGGTGCTGTGGGAG
TTCTTAGGTATGTTCTTTCCTGTTCTACATGAGTGGATCGCTAACGGTGT
CTGTAGTTACCAGCACCACAGCATTGATGAGCCTGCTTTTCTGGTTGGAT
ATGGATTCCCCTTGGAAAAATGA
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Coding sequence (CDS) from alignment at An16:1333406..1334278+

>CBS51388_010248-T1 ID=CBS51388_010248-T1|Name=CBS51388_010248-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2820bp|location=Sequence derived from alignment at An16:1333406..1334278+ (Aspergillus niger CBS 513.88)
ATGCCCGACAAAGACGCCGGAACGCCCCGTGTTTTCCTTTACCGCCATGG
AGAGACCGAATGGTCCAAAAGCGGCCGCTACACCGGCATCAGCGAAATCC
AGCTGACTGACGACGGAGTGAAGCAAGTGTCCGCTTCCGGCAAGATCCTT
GTAGGAGCTGGTAAGCTTATTGACACGGCTAAACTGGCTCGCGTGTATGT
GTCTCCGCGCCAAAGGGCAAAGCACACCTTTGACTTGGCCTTCGGGGAGG
CCGAGAAGCAGGGTTTGAAGGAAGCTGGCAAGGTGGAGGAGACGGAGCGG
CTGGCGGAGTGGGGTTATGGCTTGTATGAGGGGATGCTGACCAAGGAGAT
TCGCGCGCTGAGGAAGGAGCATGGGCTTGACGGTGAGAGGGCGTGGGATA
TCTGGAGGGATGGATGTGAGGAGGGAGAATCACCTGCGGATGTTACGGCC
CGGATTGATAGCCTGATCGAAGAGATCAGAGATCTCCATCGGGGAAACAT
GCACGGAGAGGCACCTGCTGATGTTGTTCTTATTGCGCATGGCCATACGC
TCCGTGCGTTTACCAAGCGCTGGTTGGGCTATCCGATGGAGTTTCCGTTG
TCGATGATGCTGGAGCCTGGTGCTGTGGGAGTTCTTAGTTACCAGCACCA
CAGCATTGATGAGCCTGCTTTTCTGGTTGGATATGGATTCCCCTTGGAAA
AATGAATGCCCGACAAAGACGCCGGAACGCCCCGTGTTTTCCTTTACCGC
CATGGAGAGACCGAATGGTCCAAAAGCGGCCGCTACACCGGCATCAGCGA
AATCCAGCTGACTGACGACGGAGTGAAGCAAGTGTCCGCTTCCGGCAAGA
TCCTTGTAGGAGCTGGTAAGCTTATTGACACGGCTAAACTGGCTCGCGTG
TATGTGTCTCCGCGCCAAAGGGCAAAGCACACCTTTGACTTGGCCTTCGG
GGAGGCCGAGAAGCAGGGTTTGAAGGAAGCTGGCAAGGTGGAGGAGACGG
AGCGGCTGGCGGAGTGGGGTTATGGCTTGTATGAGGGGATGCTGACCAAG
GAGATTCGCGCGCTGAGGAAGGAGCATGGGCTTGACGGTGAGAGGGCGTG
GGATATCTGGAGGGATGGATGTGAGGAGGGAGAATCACCTGCGGATGTTA
CGGCCCGGATTGATAGCCTGATCGAAGAGATCAGAGATCTCCATCGGGGA
AACATGCACGGAGAGGCACCTGCTGATGTTGTTCTTATTGCGCATGGCCA
TACGCTCCGTGCGTTTACCAAGCGCTGGTTGGGCTATCCGATGGAGTTTC
CGTTGTCGATGATGCTGGAGCCTGGTGCTGTGGGAGTTCTTAGTTACCAG
CACCACAGCATTGATGAGCCTGCTTTTCTGGTTGGATATGGATTCCCCTT
GGAAAAATGAATGCCCGACAAAGACGCCGGAACGCCCCGTGTTTTCCTTT
ACCGCCATGGAGAGACCGAATGGTCCAAAAGCGGCCGCTACACCGGCATC
AGCGAAATCCAGCTGACTGACGACGGAGTGAAGCAAGTGTCCGCTTCCGG
CAAGATCCTTGTAGGAGCTGGTAAGCTTATTGACACGGCTAAACTGGCTC
GCGTGTATGTGTCTCCGCGCCAAAGGGCAAAGCACACCTTTGACTTGGCC
TTCGGGGAGGCCGAGAAGCAGGGTTTGAAGGAAGCTGGCAAGGTGGAGGA
GACGGAGCGGCTGGCGGAGTGGGGTTATGGCTTGTATGAGGGGATGCTGA
CCAAGGAGATTCGCGCGCTGAGGAAGGAGCATGGGCTTGACGGTGAGAGG
GCGTGGGATATCTGGAGGGATGGATGTGAGGAGGGAGAATCACCTGCGGA
TGTTACGGCCCGGATTGATAGCCTGATCGAAGAGATCAGAGATCTCCATC
GGGGAAACATGCACGGAGAGGCACCTGCTGATGTTGTTCTTATTGCGCAT
GGCCATACGCTCCGTGCGTTTACCAAGCGCTGGTTGGGCTATCCGATGGA
GTTTCCGTTGTCGATGATGCTGGAGCCTGGTGCTGTGGGAGTTCTTAGTT
ACCAGCACCACAGCATTGATGAGCCTGCTTTTCTGGTTGGATATGGATTC
CCCTTGGAAAAATGAATGCCCGACAAAGACGCCGGAACGCCCCGTGTTTT
CCTTTACCGCCATGGAGAGACCGAATGGTCCAAAAGCGGCCGCTACACCG
GCATCAGCGAAATCCAGCTGACTGACGACGGAGTGAAGCAAGTGTCCGCT
TCCGGCAAGATCCTTGTAGGAGCTGGTAAGCTTATTGACACGGCTAAACT
GGCTCGCGTGTATGTGTCTCCGCGCCAAAGGGCAAAGCACACCTTTGACT
TGGCCTTCGGGGAGGCCGAGAAGCAGGGTTTGAAGGAAGCTGGCAAGGTG
GAGGAGACGGAGCGGCTGGCGGAGTGGGGTTATGGCTTGTATGAGGGGAT
GCTGACCAAGGAGATTCGCGCGCTGAGGAAGGAGCATGGGCTTGACGGTG
AGAGGGCGTGGGATATCTGGAGGGATGGATGTGAGGAGGGAGAATCACCT
GCGGATGTTACGGCCCGGATTGATAGCCTGATCGAAGAGATCAGAGATCT
CCATCGGGGAAACATGCACGGAGAGGCACCTGCTGATGTTGTTCTTATTG
CGCATGGCCATACGCTCCGTGCGTTTACCAAGCGCTGGTTGGGCTATCCG
ATGGAGTTTCCGTTGTCGATGATGCTGGAGCCTGGTGCTGTGGGAGTTCT
TAGTTACCAGCACCACAGCATTGATGAGCCTGCTTTTCTGGTTGGATATG
GATTCCCCTTGGAAAAATGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010248CBS51388_010248Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010248-T1.exon1CBS51388_010248-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_010248-T1.exon2CBS51388_010248-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010248-T1.exon3CBS51388_010248-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_010248-T1.exon4CBS51388_010248-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010248-T1.cdsCBS51388_010248-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010248-T1CBS51388_010248-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR029033
DBxrefInterPro:IPR013078
DBxrefPFAM:PF00300
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:1333406..1334278 +
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