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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:1346765..1347689- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010255-T1 ID=CBS51388_010255-T1|Name=CBS51388_010255-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=925bp|location=Sequence derived from alignment at An16:1346765..1347689- (Aspergillus niger CBS 513.88)
ATGACCACCCAAACCTCGCAAACAGTCTACCACTACCTCGACATCGGCCG
CCTAGGCCGCGGTGAAGTCGTCAGGTCAGCAGCCAGCATCCATCTCCCCA
ACCCCGCATCCGAAACCAGCAATATCCACTAACCACAGAGTATCTTATTT
ATATGGAAATAGGCTCTTCCTCAAAGACGCCGGTATCGAATTCACCGAAG
TCCGCTACCCGTACGATGATACCTGGCCCCAGGTTAGCAAAAAGCTGCAG
GAGCAGGGTATCAGTCGAACCGGGCTGGTTCCTGCGCTCGAGTACAAGGG
GAAGATTCTGACGCAGGTGCGCATTCCCTTATACTCAACGAGTCCATTCT
CCATGCACGACGACCTAATATGAATCCAGCACATCCCCATTCTCCGCTAC
CTATCGCGCGACCTCGGCCGCTACGACGGCGAGACTAACTGGGAGAAGTA
CATCGTTGATGTGGTGGCTGATATTTATATCGATTGGAGGGTTAGTATAT
CCTCTCCCCTCCTATCATCTCCTCTATTCATCAGTACTCACCATAATGTA
GAGCGAATGGGTCTCCAATTTCATGCAAGCATCCGAGAAATACAAAAACG
AGACCACGGCCAAGTACTACGATCTCGTAGGAAAGTATTACGCCGAAACG
GAGGGTCCGTATCTTCTAGGCGATAAGGTCACGTATGCGGATTTTGCCGT
CTATCAGAGTATGGATAATGATCGGAGGACGGGGACTATTGTGGTATGTT
TTATTCCTTAGTTTCTTTCATATTTTAGGAAGAATGTGGTGCCTCGGGGT
ATTTGTGTCTTTGCTAACAGTTCTTGTTCTTGGGGTAGGCGGATCTTCCT
GAGTCGCTGGCCAGGCTTAGGGATGCTTTTGAGAAGAGGGAGAATATTGC
AGCGTATATTGAGGAGACGAAGTAG back to topCoding sequence (CDS) from alignment at An16:1346765..1347689- >CBS51388_010255-T1 ID=CBS51388_010255-T1|Name=CBS51388_010255-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3090bp|location=Sequence derived from alignment at An16:1346765..1347689- (Aspergillus niger CBS 513.88)
GCGGATCTTCCTGAGTCGCTGGCCAGGCTTAGGGATGCTTTTGAGAAGAG
GGAGAATATTGCAGCGTATATTGAGGAGACGAAGTAGAGCGAATGGGTCT
CCAATTTCATGCAAGCATCCGAGAAATACAAAAACGAGACCACGGCCAAG
TACTACGATCTCGTAGGAAAGTATTACGCCGAAACGGAGGGTCCGTATCT
TCTAGGCGATAAGGTCACGTATGCGGATTTTGCCGTCTATCAGAGTATGG
ATAATGATCGGAGGACGGGGACTATTGTGCACATCCCCATTCTCCGCTAC
CTATCGCGCGACCTCGGCCGCTACGACGGCGAGACTAACTGGGAGAAGTA
CATCGTTGATGTGGTGGCTGATATTTATATCGATTGGAGGGCTCTTCCTC
AAAGACGCCGGTATCGAATTCACCGAAGTCCGCTACCCGTACGATGATAC
CTGGCCCCAGGTTAGCAAAAAGCTGCAGGAGCAGGGTATCAGTCGAACCG
GGCTGGTTCCTGCGCTCGAGTACAAGGGGAAGATTCTGACGCAGATGACC
ACCCAAACCTCGCAAACAGTCTACCACTACCTCGACATCGGCCGCCTAGG
CCGCGGTGAAGTCGTCAGGCGGATCTTCCTGAGTCGCTGGCCAGGCTTAG
GGATGCTTTTGAGAAGAGGGAGAATATTGCAGCGTATATTGAGGAGACGA
AGTAGAGCGAATGGGTCTCCAATTTCATGCAAGCATCCGAGAAATACAAA
AACGAGACCACGGCCAAGTACTACGATCTCGTAGGAAAGTATTACGCCGA
AACGGAGGGTCCGTATCTTCTAGGCGATAAGGTCACGTATGCGGATTTTG
CCGTCTATCAGAGTATGGATAATGATCGGAGGACGGGGACTATTGTGCAC
ATCCCCATTCTCCGCTACCTATCGCGCGACCTCGGCCGCTACGACGGCGA
GACTAACTGGGAGAAGTACATCGTTGATGTGGTGGCTGATATTTATATCG
ATTGGAGGGCTCTTCCTCAAAGACGCCGGTATCGAATTCACCGAAGTCCG
CTACCCGTACGATGATACCTGGCCCCAGGTTAGCAAAAAGCTGCAGGAGC
AGGGTATCAGTCGAACCGGGCTGGTTCCTGCGCTCGAGTACAAGGGGAAG
ATTCTGACGCAGATGACCACCCAAACCTCGCAAACAGTCTACCACTACCT
CGACATCGGCCGCCTAGGCCGCGGTGAAGTCGTCAGGCGGATCTTCCTGA
GTCGCTGGCCAGGCTTAGGGATGCTTTTGAGAAGAGGGAGAATATTGCAG
CGTATATTGAGGAGACGAAGTAGAGCGAATGGGTCTCCAATTTCATGCAA
GCATCCGAGAAATACAAAAACGAGACCACGGCCAAGTACTACGATCTCGT
AGGAAAGTATTACGCCGAAACGGAGGGTCCGTATCTTCTAGGCGATAAGG
TCACGTATGCGGATTTTGCCGTCTATCAGAGTATGGATAATGATCGGAGG
ACGGGGACTATTGTGCACATCCCCATTCTCCGCTACCTATCGCGCGACCT
CGGCCGCTACGACGGCGAGACTAACTGGGAGAAGTACATCGTTGATGTGG
TGGCTGATATTTATATCGATTGGAGGGCTCTTCCTCAAAGACGCCGGTAT
CGAATTCACCGAAGTCCGCTACCCGTACGATGATACCTGGCCCCAGGTTA
GCAAAAAGCTGCAGGAGCAGGGTATCAGTCGAACCGGGCTGGTTCCTGCG
CTCGAGTACAAGGGGAAGATTCTGACGCAGATGACCACCCAAACCTCGCA
AACAGTCTACCACTACCTCGACATCGGCCGCCTAGGCCGCGGTGAAGTCG
TCAGGCGGATCTTCCTGAGTCGCTGGCCAGGCTTAGGGATGCTTTTGAGA
AGAGGGAGAATATTGCAGCGTATATTGAGGAGACGAAGTAGAGCGAATGG
GTCTCCAATTTCATGCAAGCATCCGAGAAATACAAAAACGAGACCACGGC
CAAGTACTACGATCTCGTAGGAAAGTATTACGCCGAAACGGAGGGTCCGT
ATCTTCTAGGCGATAAGGTCACGTATGCGGATTTTGCCGTCTATCAGAGT
ATGGATAATGATCGGAGGACGGGGACTATTGTGCACATCCCCATTCTCCG
CTACCTATCGCGCGACCTCGGCCGCTACGACGGCGAGACTAACTGGGAGA
AGTACATCGTTGATGTGGTGGCTGATATTTATATCGATTGGAGGGCTCTT
CCTCAAAGACGCCGGTATCGAATTCACCGAAGTCCGCTACCCGTACGATG
ATACCTGGCCCCAGGTTAGCAAAAAGCTGCAGGAGCAGGGTATCAGTCGA
ACCGGGCTGGTTCCTGCGCTCGAGTACAAGGGGAAGATTCTGACGCAGAT
GACCACCCAAACCTCGCAAACAGTCTACCACTACCTCGACATCGGCCGCC
TAGGCCGCGGTGAAGTCGTCAGGCGGATCTTCCTGAGTCGCTGGCCAGGC
TTAGGGATGCTTTTGAGAAGAGGGAGAATATTGCAGCGTATATTGAGGAG
ACGAAGTAGAGCGAATGGGTCTCCAATTTCATGCAAGCATCCGAGAAATA
CAAAAACGAGACCACGGCCAAGTACTACGATCTCGTAGGAAAGTATTACG
CCGAAACGGAGGGTCCGTATCTTCTAGGCGATAAGGTCACGTATGCGGAT
TTTGCCGTCTATCAGAGTATGGATAATGATCGGAGGACGGGGACTATTGT
GCACATCCCCATTCTCCGCTACCTATCGCGCGACCTCGGCCGCTACGACG
GCGAGACTAACTGGGAGAAGTACATCGTTGATGTGGTGGCTGATATTTAT
ATCGATTGGAGGGCTCTTCCTCAAAGACGCCGGTATCGAATTCACCGAAG
TCCGCTACCCGTACGATGATACCTGGCCCCAGGTTAGCAAAAAGCTGCAG
GAGCAGGGTATCAGTCGAACCGGGCTGGTTCCTGCGCTCGAGTACAAGGG
GAAGATTCTGACGCAGATGACCACCCAAACCTCGCAAACAGTCTACCACT
ACCTCGACATCGGCCGCCTAGGCCGCGGTGAAGTCGTCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036282 |
| DBxref | InterPro:IPR010987 |
| DBxref | InterPro:IPR040079 |
| DBxref | InterPro:IPR004045 |
| DBxref | InterPro:IPR036249 |
| DBxref | InterPro:IPR004046 |
| DBxref | PFAM:PF02798 |
| DBxref | PFAM:PF14497 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:1346765..1347689 - |
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