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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:1350576..1352370- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010257-T1 ID=CBS51388_010257-T1|Name=CBS51388_010257-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1795bp|location=Sequence derived from alignment at An16:1350576..1352370- (Aspergillus niger CBS 513.88)
ATGAGACTTCTCCATCTGGCTGCTGGTGCAGCCCTTTTCGCCAGCTCGGC
GCTCGCCGTCGACCCCATCGAAATCAAGGTATGATTCCTTCTAATGCCCT
TCTTCTAGCATTTGTAATGCTCATTCCATCTAGGGTTCCAAGTTCTTCTA
CTCCAGCAATGACACTCAATTGTAAGTTTTCATCTAATATGCTTCCACCG
TATGAGATCAAGTTCTAACATGGTTCCAGCTTCCTCCGCGGTGTGGCGTA
TCAGAGTCGGTAGTTTCCTCCTGGTATATCGTTCAAAACTAATTCTCCAA
AACAGAGAGCACCACTGCCGACCCCTTGAGTTCCAAGACCACCTGCGAGC
GCGACATCCCCTACATGAAGGAGTTGCGCACCAACGTCATTCGTACCTAC
GACATTGACCCTACAGCTGATCACGATGATTGCATGCAGCTTCTCGCCGA
CGCTGGCATCTACGTTATTGCTGATCTCTCCAACACGAGCGTCGCCATCG
ACCGCAGTGATCCTGCCTGGCAGCTCACCCTGTACAACCGCTACACCAGT
GTCATTGACGCCATGGCCGGTTACAACAACACTCTCGGCTTCTTTGCTGG
CAATGAAATTGCCAACAGTGTTGGAACCACTGACGCCATGCCCTACGTCA
AGGCTGCCATCCGTGATATGAAAACCTACATCAGCAACAAGGGATACCGT
ACCATTGGTGTGGGATACGCCACCGCTGATGTTTCCTCCATCCGTGCTGA
CCTGGCCGACTACATTAACTGCCAGTCGGAGTCTGTCGGTATTGATTTCT
TCGGTTACAACATCTACTCCTGGTGCGGTGACTCAACCTACGCGGAATCG
GGATACAAGTCTCGTACCGAAGAGTTTGCCAACTACTCCGTCCCTGTCTT
CTTCTCCGAGTACGGTTGCAACAGTGTCACTCCTCGTACATTCACTGAAG
TTGCGGCTCTCTACGGCGATACGATGTCCCAGGTCTGGTCTGGTGGTATT
GTCTACGAGTACTTCCAAGACACCAACGACTATGGTTAGTCCCCTCTATT
CTTCGCTACTTCAGCAGAAACATTCTAACCATTTACAGGCCTGGTCTCCG
TCATCGACAGTACCAGCGTCAGCACCATGACCGACTTCAGCTACTACTCC
AAGGAAATCGCCAGCGCCACCCCCAGCAGCACCAACAAGGCCTCCTACAC
CCCCACCAACACCGCCCTCCGCAGCTGCCCTACTGAGAACTCCTCCTGGA
AGGCCAAGGCCTCTCCCCTTCCCCCCACCCCGGACTCTGATCTCTGTGAA
TGCATGGTCGACGCCGCCACCTGCACCGTCAAGGACTCCCTCGACTCCGA
CGACATCGGTGACCTGATGGGCGAAGTCTGCGGTATGATGTCCTGCTCCG
GTATCACCGGCAACGGCACCACCGGCAAGTACGGCGCCTACAGCATGTGC
AACAGCAAGCAGCAGCTTGTCTTCGTCCTGAACGAGTACTACGAGAAGCA
GAAGTCCGCCGGTAACGCTGCCTCTGCTTGCAGCTGGGGTGGCTCCGCTA
CCACCAAGTCTGCTACCTCCGCCACCGGTTCTTGCAAGACTTACATGTCC
GAGGCTGGTACTGCCGGCACGGGTCTCGTTACTTCTGAGGCTACTGCCAC
TGCTGGATCGAGCGGTTCGACTGCCTCGTCTACTTCCGTCTCTAGCACTT
CCGCTGGTGCCAAGGCCGTCCATGTCGGTTACTTCCAGCTCGCTGTTTAC
GTGGCCGTTGCTGTTGTTAGCGGTTTTGCTATGATTATGTTGTAG back to topCoding sequence (CDS) from alignment at An16:1350576..1352370- >CBS51388_010257-T1 ID=CBS51388_010257-T1|Name=CBS51388_010257-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7890bp|location=Sequence derived from alignment at An16:1350576..1352370- (Aspergillus niger CBS 513.88)
GCCTGGTCTCCGTCATCGACAGTACCAGCGTCAGCACCATGACCGACTTC
AGCTACTACTCCAAGGAAATCGCCAGCGCCACCCCCAGCAGCACCAACAA
GGCCTCCTACACCCCCACCAACACCGCCCTCCGCAGCTGCCCTACTGAGA
ACTCCTCCTGGAAGGCCAAGGCCTCTCCCCTTCCCCCCACCCCGGACTCT
GATCTCTGTGAATGCATGGTCGACGCCGCCACCTGCACCGTCAAGGACTC
CCTCGACTCCGACGACATCGGTGACCTGATGGGCGAAGTCTGCGGTATGA
TGTCCTGCTCCGGTATCACCGGCAACGGCACCACCGGCAAGTACGGCGCC
TACAGCATGTGCAACAGCAAGCAGCAGCTTGTCTTCGTCCTGAACGAGTA
CTACGAGAAGCAGAAGTCCGCCGGTAACGCTGCCTCTGCTTGCAGCTGGG
GTGGCTCCGCTACCACCAAGTCTGCTACCTCCGCCACCGGTTCTTGCAAG
ACTTACATGTCCGAGGCTGGTACTGCCGGCACGGGTCTCGTTACTTCTGA
GGCTACTGCCACTGCTGGATCGAGCGGTTCGACTGCCTCGTCTACTTCCG
TCTCTAGCACTTCCGCTGGTGCCAAGGCCGTCCATGTCGGTTACTTCCAG
CTCGCTGTTTACGTGGCCGTTGCTGTTGTTAGCGGTTTTGCTATGATTAT
GTTGTAGAGAGCACCACTGCCGACCCCTTGAGTTCCAAGACCACCTGCGA
GCGCGACATCCCCTACATGAAGGAGTTGCGCACCAACGTCATTCGTACCT
ACGACATTGACCCTACAGCTGATCACGATGATTGCATGCAGCTTCTCGCC
GACGCTGGCATCTACGTTATTGCTGATCTCTCCAACACGAGCGTCGCCAT
CGACCGCAGTGATCCTGCCTGGCAGCTCACCCTGTACAACCGCTACACCA
GTGTCATTGACGCCATGGCCGGTTACAACAACACTCTCGGCTTCTTTGCT
GGCAATGAAATTGCCAACAGTGTTGGAACCACTGACGCCATGCCCTACGT
CAAGGCTGCCATCCGTGATATGAAAACCTACATCAGCAACAAGGGATACC
GTACCATTGGTGTGGGATACGCCACCGCTGATGTTTCCTCCATCCGTGCT
GACCTGGCCGACTACATTAACTGCCAGTCGGAGTCTGTCGGTATTGATTT
CTTCGGTTACAACATCTACTCCTGGTGCGGTGACTCAACCTACGCGGAAT
CGGGATACAAGTCTCGTACCGAAGAGTTTGCCAACTACTCCGTCCCTGTC
TTCTTCTCCGAGTACGGTTGCAACAGTGTCACTCCTCGTACATTCACTGA
AGTTGCGGCTCTCTACGGCGATACGATGTCCCAGGTCTGGTCTGGTGGTA
TTGTCTACGAGTACTTCCAAGACACCAACGACTATGCTTCCTCCGCGGTG
TGGCGTATCAGAGGTTCCAAGTTCTTCTACTCCAGCAATGACACTCAATT
ATGAGACTTCTCCATCTGGCTGCTGGTGCAGCCCTTTTCGCCAGCTCGGC
GCTCGCCGTCGACCCCATCGAAATCAAGGCCTGGTCTCCGTCATCGACAG
TACCAGCGTCAGCACCATGACCGACTTCAGCTACTACTCCAAGGAAATCG
CCAGCGCCACCCCCAGCAGCACCAACAAGGCCTCCTACACCCCCACCAAC
ACCGCCCTCCGCAGCTGCCCTACTGAGAACTCCTCCTGGAAGGCCAAGGC
CTCTCCCCTTCCCCCCACCCCGGACTCTGATCTCTGTGAATGCATGGTCG
ACGCCGCCACCTGCACCGTCAAGGACTCCCTCGACTCCGACGACATCGGT
GACCTGATGGGCGAAGTCTGCGGTATGATGTCCTGCTCCGGTATCACCGG
CAACGGCACCACCGGCAAGTACGGCGCCTACAGCATGTGCAACAGCAAGC
AGCAGCTTGTCTTCGTCCTGAACGAGTACTACGAGAAGCAGAAGTCCGCC
GGTAACGCTGCCTCTGCTTGCAGCTGGGGTGGCTCCGCTACCACCAAGTC
TGCTACCTCCGCCACCGGTTCTTGCAAGACTTACATGTCCGAGGCTGGTA
CTGCCGGCACGGGTCTCGTTACTTCTGAGGCTACTGCCACTGCTGGATCG
AGCGGTTCGACTGCCTCGTCTACTTCCGTCTCTAGCACTTCCGCTGGTGC
CAAGGCCGTCCATGTCGGTTACTTCCAGCTCGCTGTTTACGTGGCCGTTG
CTGTTGTTAGCGGTTTTGCTATGATTATGTTGTAGAGAGCACCACTGCCG
ACCCCTTGAGTTCCAAGACCACCTGCGAGCGCGACATCCCCTACATGAAG
GAGTTGCGCACCAACGTCATTCGTACCTACGACATTGACCCTACAGCTGA
TCACGATGATTGCATGCAGCTTCTCGCCGACGCTGGCATCTACGTTATTG
CTGATCTCTCCAACACGAGCGTCGCCATCGACCGCAGTGATCCTGCCTGG
CAGCTCACCCTGTACAACCGCTACACCAGTGTCATTGACGCCATGGCCGG
TTACAACAACACTCTCGGCTTCTTTGCTGGCAATGAAATTGCCAACAGTG
TTGGAACCACTGACGCCATGCCCTACGTCAAGGCTGCCATCCGTGATATG
AAAACCTACATCAGCAACAAGGGATACCGTACCATTGGTGTGGGATACGC
CACCGCTGATGTTTCCTCCATCCGTGCTGACCTGGCCGACTACATTAACT
GCCAGTCGGAGTCTGTCGGTATTGATTTCTTCGGTTACAACATCTACTCC
TGGTGCGGTGACTCAACCTACGCGGAATCGGGATACAAGTCTCGTACCGA
AGAGTTTGCCAACTACTCCGTCCCTGTCTTCTTCTCCGAGTACGGTTGCA
ACAGTGTCACTCCTCGTACATTCACTGAAGTTGCGGCTCTCTACGGCGAT
ACGATGTCCCAGGTCTGGTCTGGTGGTATTGTCTACGAGTACTTCCAAGA
CACCAACGACTATGCTTCCTCCGCGGTGTGGCGTATCAGAGGTTCCAAGT
TCTTCTACTCCAGCAATGACACTCAATTATGAGACTTCTCCATCTGGCTG
CTGGTGCAGCCCTTTTCGCCAGCTCGGCGCTCGCCGTCGACCCCATCGAA
ATCAAGGCCTGGTCTCCGTCATCGACAGTACCAGCGTCAGCACCATGACC
GACTTCAGCTACTACTCCAAGGAAATCGCCAGCGCCACCCCCAGCAGCAC
CAACAAGGCCTCCTACACCCCCACCAACACCGCCCTCCGCAGCTGCCCTA
CTGAGAACTCCTCCTGGAAGGCCAAGGCCTCTCCCCTTCCCCCCACCCCG
GACTCTGATCTCTGTGAATGCATGGTCGACGCCGCCACCTGCACCGTCAA
GGACTCCCTCGACTCCGACGACATCGGTGACCTGATGGGCGAAGTCTGCG
GTATGATGTCCTGCTCCGGTATCACCGGCAACGGCACCACCGGCAAGTAC
GGCGCCTACAGCATGTGCAACAGCAAGCAGCAGCTTGTCTTCGTCCTGAA
CGAGTACTACGAGAAGCAGAAGTCCGCCGGTAACGCTGCCTCTGCTTGCA
GCTGGGGTGGCTCCGCTACCACCAAGTCTGCTACCTCCGCCACCGGTTCT
TGCAAGACTTACATGTCCGAGGCTGGTACTGCCGGCACGGGTCTCGTTAC
TTCTGAGGCTACTGCCACTGCTGGATCGAGCGGTTCGACTGCCTCGTCTA
CTTCCGTCTCTAGCACTTCCGCTGGTGCCAAGGCCGTCCATGTCGGTTAC
TTCCAGCTCGCTGTTTACGTGGCCGTTGCTGTTGTTAGCGGTTTTGCTAT
GATTATGTTGTAGAGAGCACCACTGCCGACCCCTTGAGTTCCAAGACCAC
CTGCGAGCGCGACATCCCCTACATGAAGGAGTTGCGCACCAACGTCATTC
GTACCTACGACATTGACCCTACAGCTGATCACGATGATTGCATGCAGCTT
CTCGCCGACGCTGGCATCTACGTTATTGCTGATCTCTCCAACACGAGCGT
CGCCATCGACCGCAGTGATCCTGCCTGGCAGCTCACCCTGTACAACCGCT
ACACCAGTGTCATTGACGCCATGGCCGGTTACAACAACACTCTCGGCTTC
TTTGCTGGCAATGAAATTGCCAACAGTGTTGGAACCACTGACGCCATGCC
CTACGTCAAGGCTGCCATCCGTGATATGAAAACCTACATCAGCAACAAGG
GATACCGTACCATTGGTGTGGGATACGCCACCGCTGATGTTTCCTCCATC
CGTGCTGACCTGGCCGACTACATTAACTGCCAGTCGGAGTCTGTCGGTAT
TGATTTCTTCGGTTACAACATCTACTCCTGGTGCGGTGACTCAACCTACG
CGGAATCGGGATACAAGTCTCGTACCGAAGAGTTTGCCAACTACTCCGTC
CCTGTCTTCTTCTCCGAGTACGGTTGCAACAGTGTCACTCCTCGTACATT
CACTGAAGTTGCGGCTCTCTACGGCGATACGATGTCCCAGGTCTGGTCTG
GTGGTATTGTCTACGAGTACTTCCAAGACACCAACGACTATGCTTCCTCC
GCGGTGTGGCGTATCAGAGGTTCCAAGTTCTTCTACTCCAGCAATGACAC
TCAATTATGAGACTTCTCCATCTGGCTGCTGGTGCAGCCCTTTTCGCCAG
CTCGGCGCTCGCCGTCGACCCCATCGAAATCAAGGCCTGGTCTCCGTCAT
CGACAGTACCAGCGTCAGCACCATGACCGACTTCAGCTACTACTCCAAGG
AAATCGCCAGCGCCACCCCCAGCAGCACCAACAAGGCCTCCTACACCCCC
ACCAACACCGCCCTCCGCAGCTGCCCTACTGAGAACTCCTCCTGGAAGGC
CAAGGCCTCTCCCCTTCCCCCCACCCCGGACTCTGATCTCTGTGAATGCA
TGGTCGACGCCGCCACCTGCACCGTCAAGGACTCCCTCGACTCCGACGAC
ATCGGTGACCTGATGGGCGAAGTCTGCGGTATGATGTCCTGCTCCGGTAT
CACCGGCAACGGCACCACCGGCAAGTACGGCGCCTACAGCATGTGCAACA
GCAAGCAGCAGCTTGTCTTCGTCCTGAACGAGTACTACGAGAAGCAGAAG
TCCGCCGGTAACGCTGCCTCTGCTTGCAGCTGGGGTGGCTCCGCTACCAC
CAAGTCTGCTACCTCCGCCACCGGTTCTTGCAAGACTTACATGTCCGAGG
CTGGTACTGCCGGCACGGGTCTCGTTACTTCTGAGGCTACTGCCACTGCT
GGATCGAGCGGTTCGACTGCCTCGTCTACTTCCGTCTCTAGCACTTCCGC
TGGTGCCAAGGCCGTCCATGTCGGTTACTTCCAGCTCGCTGTTTACGTGG
CCGTTGCTGTTGTTAGCGGTTTTGCTATGATTATGTTGTAGAGAGCACCA
CTGCCGACCCCTTGAGTTCCAAGACCACCTGCGAGCGCGACATCCCCTAC
ATGAAGGAGTTGCGCACCAACGTCATTCGTACCTACGACATTGACCCTAC
AGCTGATCACGATGATTGCATGCAGCTTCTCGCCGACGCTGGCATCTACG
TTATTGCTGATCTCTCCAACACGAGCGTCGCCATCGACCGCAGTGATCCT
GCCTGGCAGCTCACCCTGTACAACCGCTACACCAGTGTCATTGACGCCAT
GGCCGGTTACAACAACACTCTCGGCTTCTTTGCTGGCAATGAAATTGCCA
ACAGTGTTGGAACCACTGACGCCATGCCCTACGTCAAGGCTGCCATCCGT
GATATGAAAACCTACATCAGCAACAAGGGATACCGTACCATTGGTGTGGG
ATACGCCACCGCTGATGTTTCCTCCATCCGTGCTGACCTGGCCGACTACA
TTAACTGCCAGTCGGAGTCTGTCGGTATTGATTTCTTCGGTTACAACATC
TACTCCTGGTGCGGTGACTCAACCTACGCGGAATCGGGATACAAGTCTCG
TACCGAAGAGTTTGCCAACTACTCCGTCCCTGTCTTCTTCTCCGAGTACG
GTTGCAACAGTGTCACTCCTCGTACATTCACTGAAGTTGCGGCTCTCTAC
GGCGATACGATGTCCCAGGTCTGGTCTGGTGGTATTGTCTACGAGTACTT
CCAAGACACCAACGACTATGCTTCCTCCGCGGTGTGGCGTATCAGAGGTT
CCAAGTTCTTCTACTCCAGCAATGACACTCAATTATGAGACTTCTCCATC
TGGCTGCTGGTGCAGCCCTTTTCGCCAGCTCGGCGCTCGCCGTCGACCCC
ATCGAAATCAAGGCCTGGTCTCCGTCATCGACAGTACCAGCGTCAGCACC
ATGACCGACTTCAGCTACTACTCCAAGGAAATCGCCAGCGCCACCCCCAG
CAGCACCAACAAGGCCTCCTACACCCCCACCAACACCGCCCTCCGCAGCT
GCCCTACTGAGAACTCCTCCTGGAAGGCCAAGGCCTCTCCCCTTCCCCCC
ACCCCGGACTCTGATCTCTGTGAATGCATGGTCGACGCCGCCACCTGCAC
CGTCAAGGACTCCCTCGACTCCGACGACATCGGTGACCTGATGGGCGAAG
TCTGCGGTATGATGTCCTGCTCCGGTATCACCGGCAACGGCACCACCGGC
AAGTACGGCGCCTACAGCATGTGCAACAGCAAGCAGCAGCTTGTCTTCGT
CCTGAACGAGTACTACGAGAAGCAGAAGTCCGCCGGTAACGCTGCCTCTG
CTTGCAGCTGGGGTGGCTCCGCTACCACCAAGTCTGCTACCTCCGCCACC
GGTTCTTGCAAGACTTACATGTCCGAGGCTGGTACTGCCGGCACGGGTCT
CGTTACTTCTGAGGCTACTGCCACTGCTGGATCGAGCGGTTCGACTGCCT
CGTCTACTTCCGTCTCTAGCACTTCCGCTGGTGCCAAGGCCGTCCATGTC
GGTTACTTCCAGCTCGCTGTTTACGTGGCCGTTGCTGTTGTTAGCGGTTT
TGCTATGATTATGTTGTAGAGAGCACCACTGCCGACCCCTTGAGTTCCAA
GACCACCTGCGAGCGCGACATCCCCTACATGAAGGAGTTGCGCACCAACG
TCATTCGTACCTACGACATTGACCCTACAGCTGATCACGATGATTGCATG
CAGCTTCTCGCCGACGCTGGCATCTACGTTATTGCTGATCTCTCCAACAC
GAGCGTCGCCATCGACCGCAGTGATCCTGCCTGGCAGCTCACCCTGTACA
ACCGCTACACCAGTGTCATTGACGCCATGGCCGGTTACAACAACACTCTC
GGCTTCTTTGCTGGCAATGAAATTGCCAACAGTGTTGGAACCACTGACGC
CATGCCCTACGTCAAGGCTGCCATCCGTGATATGAAAACCTACATCAGCA
ACAAGGGATACCGTACCATTGGTGTGGGATACGCCACCGCTGATGTTTCC
TCCATCCGTGCTGACCTGGCCGACTACATTAACTGCCAGTCGGAGTCTGT
CGGTATTGATTTCTTCGGTTACAACATCTACTCCTGGTGCGGTGACTCAA
CCTACGCGGAATCGGGATACAAGTCTCGTACCGAAGAGTTTGCCAACTAC
TCCGTCCCTGTCTTCTTCTCCGAGTACGGTTGCAACAGTGTCACTCCTCG
TACATTCACTGAAGTTGCGGCTCTCTACGGCGATACGATGTCCCAGGTCT
GGTCTGGTGGTATTGTCTACGAGTACTTCCAAGACACCAACGACTATGCT
TCCTCCGCGGTGTGGCGTATCAGAGGTTCCAAGTTCTTCTACTCCAGCAA
TGACACTCAATTATGAGACTTCTCCATCTGGCTGCTGGTGCAGCCCTTTT
CGCCAGCTCGGCGCTCGCCGTCGACCCCATCGAAATCAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| Note | CAZy:CBM43 |
| Note | CAZy:GH72 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR004886 |
| DBxref | InterPro:IPR012946 |
| DBxref | PFAM:PF07983 |
| DBxref | PFAM:PF03198 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:1350576..1352370 - |
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