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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:1519710..1520341- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010307-T1 ID=CBS51388_010307-T1|Name=CBS51388_010307-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=632bp|location=Sequence derived from alignment at An16:1519710..1520341- (Aspergillus niger CBS 513.88)
ATGGAGCTCGGCCGGATTGTGCTCCTAACAAACGGAGAGGCATATTGCCT
CATTCGCCGAACGTGGCTAACCAAGACATTCCTGCTCGGAGACATCATCT
CGTTCATTATGCAAGGCGCAGGTAATCTCCCCTACCTCCCTTATTAATGC
AGGTTTACTCTGCTAAGTCTCATTCAGGGGGCGGGATAATGGCCTCTGGA
ACACCCAACGCCCTAACCACTGGCGAGAATATCATAATCGGCGGTCTCGT
CGTACAACTAATCTTCTTCTCGCTCTTCGTCATAACGAGTATAAAATTCC
ACCGCGGGGTGTCGAACACTCCATCACGCCGTGTCCTTCACTCCCAAGCG
CCCTGGAAGCGGCACATGTACGCCCTGTACGGGGGAAGCGCGCTTATCTT
TGTCCGATCACTGTTCCGATTGATTGAATATGTGCCAGGAAATGACGGGT
ATCTAGTATCACATGAGGTATACCTGTACATCTTTGATGCGTTGCTCATG
GTGCTGGTTATGGCTCTCTTTGCATGGGTGCATCCGAGTGAAGTGCATGC
GTTATTGACGCCGGGGGGTCGGGGGAGGGCTGCTGAACGGGTGTTTTGGT
TGAAGATGGAGGGTGGTGAGAGCTTGCCGTAG back to topCoding sequence (CDS) from alignment at An16:1519710..1520341- >CBS51388_010307-T1 ID=CBS51388_010307-T1|Name=CBS51388_010307-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1152bp|location=Sequence derived from alignment at An16:1519710..1520341- (Aspergillus niger CBS 513.88)
GGGGCGGGATAATGGCCTCTGGAACACCCAACGCCCTAACCACTGGCGAG
AATATCATAATCGGCGGTCTCGTCGTACAACTAATCTTCTTCTCGCTCTT
CGTCATAACGAGTATAAAATTCCACCGCGGGGTGTCGAACACTCCATCAC
GCCGTGTCCTTCACTCCCAAGCGCCCTGGAAGCGGCACATGTACGCCCTG
TACGGGGGAAGCGCGCTTATCTTTGTCCGATCACTGTTCCGATTGATTGA
ATATGTGCCAGGAAATGACGGGTATCTAGTATCACATGAGGTATACCTGT
ACATCTTTGATGCGTTGCTCATGGTGCTGGTTATGGCTCTCTTTGCATGG
GTGCATCCGAGTGAAGTGCATGCGTTATTGACGCCGGGGGGTCGGGGGAG
GGCTGCTGAACGGGTGTTTTGGTTGAAGATGGAGGGTGGTGAGAGCTTGC
CGTAGATGGAGCTCGGCCGGATTGTGCTCCTAACAAACGGAGAGGCATAT
TGCCTCATTCGCCGAACGTGGCTAACCAAGACATTCCTGCTCGGAGACAT
CATCTCGTTCATTATGCAAGGCGCAGGGGGCGGGATAATGGCCTCTGGAA
CACCCAACGCCCTAACCACTGGCGAGAATATCATAATCGGCGGTCTCGTC
GTACAACTAATCTTCTTCTCGCTCTTCGTCATAACGAGTATAAAATTCCA
CCGCGGGGTGTCGAACACTCCATCACGCCGTGTCCTTCACTCCCAAGCGC
CCTGGAAGCGGCACATGTACGCCCTGTACGGGGGAAGCGCGCTTATCTTT
GTCCGATCACTGTTCCGATTGATTGAATATGTGCCAGGAAATGACGGGTA
TCTAGTATCACATGAGGTATACCTGTACATCTTTGATGCGTTGCTCATGG
TGCTGGTTATGGCTCTCTTTGCATGGGTGCATCCGAGTGAAGTGCATGCG
TTATTGACGCCGGGGGGTCGGGGGAGGGCTGCTGAACGGGTGTTTTGGTT
GAAGATGGAGGGTGGTGAGAGCTTGCCGTAGATGGAGCTCGGCCGGATTG
TGCTCCTAACAAACGGAGAGGCATATTGCCTCATTCGCCGAACGTGGCTA
ACCAAGACATTCCTGCTCGGAGACATCATCTCGTTCATTATGCAAGGCGC
AG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_16.3 |
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:1519710..1520341 - |
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