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CBS51388_010309-T1, CBS51388_010309-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010309-T1
Unique NameCBS51388_010309-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:1524247..1526272-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010309-T1 ID=CBS51388_010309-T1|Name=CBS51388_010309-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2026bp|location=Sequence derived from alignment at An16:1524247..1526272- (Aspergillus niger CBS 513.88)
ATGGAATCCGCACGCCGCTATAACGTCGAACGGTCCTGCCTGCGCTGCCA
TCAACGCAAGGTCCGCTGCGATAAGAGCTCTCCATGTGGGTCTTGTATAC
GAGCAAATGTGCTCTGTCAATACCCCGGCCCTAATCGCGTCAAGCGTCGG
TCTCCAAAAGTTCACAATTCTGATGTCATTGCCCGACTGGAATCACTTGA
GCGCTCCATCGCGGCTCTAGCTGGAAACCGATTGCTGCCTCACCTTCAGC
ACGAAGTGGCAGACGGACGGACCGTTTCTGCACCAGGTGCGGGGTCCCCC
TCAAGCAAAGAACCGTCCCCGACGGGCACAAATGCGGCGGCGGAGCCATC
GCACGACGGCCTTCTAGTTGAGGACGGCCGGTATATCAATGAACAACTCT
TGTCTCGGGTCCTGGAAGATGAGAAAGAGCTTCAATCTGCCATTGGGACG
CCGAAAAGCGATACCAGCAGCTCCCGGCGCCCACTCACGCTCAGAGCGGA
AGGTCTCCTTGTCAGTCGCTATGTGGAGGAGGGAGATCTCTATAGCCTGC
ACCCGTGTCAGTGGCAGTCGACACAGCTGTGGCAAACCTTCTTGAACCGC
ATCGACCCAATAATCAAGATTCTTCACGTTCCATCGACTCAGCCGCGGAT
ATTCGCGGCTATCAACGAGCCAGCGGCCGCGCCCGCTGATCTCCATGCTT
TGCTTTTTGCCATCTTCTTTGCGGCCACGACAAGTGTGCTTGCCGAGGAC
CCAGCACATGAACAGAGGCGATCAGAAGTCAAGCGATACCAGCAAGGGCT
GGAACTTGCTCTCTATCAGTCGAATTTCTTGGACGCTCCCACACTAACAT
CGCTGCAAGCGATAAGTATCTACCAGGTAAGAACCAGCTAGCTAGTATTG
CTATATGGACTTGTAGCTCATCATACGGCATATTTAGATGTGCTTGCGCT
ATTACAACAGCGGACGATCTGGATGGACGATGCGAGGGTTGGTTATCCGG
GCAGCACAATCCATTGGACTCCACCGTGACGGAAGACACTTCAAGTTGAC
TCCGCTAGAATGTGAGCTGCGCCGCCGACTCTGGTGGCACATTTGTACGG
CTGATAGTCGCGCGGTCGAGGATCATGGAGTCGGTGTCAGTAGTGGCGAG
GAGGTCTGCGACACCGCATTTCCTGCAAATATCGACGATCAGGACCTTTC
TGCTACGGCGACGGTGCCACCGGAGTCCAAAGACTGCTGGACAGAGATGA
CAGCATCCCTGATCACAACAGTAGTGAACGAAAAGCGCCTGGAATTGCAT
CGCACACTGACAACCAAAGTCACTGGGAAAGATCCCGCTGAGATAGCGCG
GGAAGCAAAAGAGCACGTATACAACACCTATATGCAACATGGCGATCCCA
ACATTCCCATCCAACGACAAGGAATGATACTAGGGGAGGTTCTAGTACTG
AAGATGGAAATGTACTTGAACCAAAAAGCCCTCCAGACAAATAGCACCGC
AATACCGGTCGCGGAGCGTCGTGAGTTGCAGACCAAAACTCTGGACATCT
CCTGCCAAGCCCTCGAACGCACCAATGAAATGTTTACCGACGCGCTTCTC
CGCGGATATCGCTGGCTTTCTTCTACATTCATGCCTTACTTTCTCCTCAC
ATACATATTGTGGCACCTCTGTGTGTATCCAGTGGGGCTGCATGTTGAAC
GTGCATGGCGAGCAATTAACCTGGTTTTCGACCTGACCGAGAAGGACCCC
CTGTGGCCAAACCCGGGGCCAAAGTGGGCGATAATCACTCGCCTGCGCGA
CAAGGCGTTGCATATACGACAGATGCAGGTGGCTGCGGAGCAGGCTGCGG
GCTCAGCCGATGAGAACCAACCGACAGGTGCCGATCAAGCGGAGGCGCCA
ATGGTTGAGTCGTTCTTTGACTTTGTAAACTGGGATATGGGCGTCCTTGG
GTTTCCGGACTGGACTGGCTTAATGCAGAGTGTCGACATTACGGGCTTCG
AGCATCTGATAGATACTCAGATTTGA
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Coding sequence (CDS) from alignment at An16:1524247..1526272-

>CBS51388_010309-T1 ID=CBS51388_010309-T1|Name=CBS51388_010309-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3930bp|location=Sequence derived from alignment at An16:1524247..1526272- (Aspergillus niger CBS 513.88)
ATGTGCTTGCGCTATTACAACAGCGGACGATCTGGATGGACGATGCGAGG
GTTGGTTATCCGGGCAGCACAATCCATTGGACTCCACCGTGACGGAAGAC
ACTTCAAGTTGACTCCGCTAGAATGTGAGCTGCGCCGCCGACTCTGGTGG
CACATTTGTACGGCTGATAGTCGCGCGGTCGAGGATCATGGAGTCGGTGT
CAGTAGTGGCGAGGAGGTCTGCGACACCGCATTTCCTGCAAATATCGACG
ATCAGGACCTTTCTGCTACGGCGACGGTGCCACCGGAGTCCAAAGACTGC
TGGACAGAGATGACAGCATCCCTGATCACAACAGTAGTGAACGAAAAGCG
CCTGGAATTGCATCGCACACTGACAACCAAAGTCACTGGGAAAGATCCCG
CTGAGATAGCGCGGGAAGCAAAAGAGCACGTATACAACACCTATATGCAA
CATGGCGATCCCAACATTCCCATCCAACGACAAGGAATGATACTAGGGGA
GGTTCTAGTACTGAAGATGGAAATGTACTTGAACCAAAAAGCCCTCCAGA
CAAATAGCACCGCAATACCGGTCGCGGAGCGTCGTGAGTTGCAGACCAAA
ACTCTGGACATCTCCTGCCAAGCCCTCGAACGCACCAATGAAATGTTTAC
CGACGCGCTTCTCCGCGGATATCGCTGGCTTTCTTCTACATTCATGCCTT
ACTTTCTCCTCACATACATATTGTGGCACCTCTGTGTGTATCCAGTGGGG
CTGCATGTTGAACGTGCATGGCGAGCAATTAACCTGGTTTTCGACCTGAC
CGAGAAGGACCCCCTGTGGCCAAACCCGGGGCCAAAGTGGGCGATAATCA
CTCGCCTGCGCGACAAGGCGTTGCATATACGACAGATGCAGGTGGCTGCG
GAGCAGGCTGCGGGCTCAGCCGATGAGAACCAACCGACAGGTGCCGATCA
AGCGGAGGCGCCAATGGTTGAGTCGTTCTTTGACTTTGTAAACTGGGATA
TGGGCGTCCTTGGGTTTCCGGACTGGACTGGCTTAATGCAGAGTGTCGAC
ATTACGGGCTTCGAGCATCTGATAGATACTCAGATTTGAATGGAATCCGC
ACGCCGCTATAACGTCGAACGGTCCTGCCTGCGCTGCCATCAACGCAAGG
TCCGCTGCGATAAGAGCTCTCCATGTGGGTCTTGTATACGAGCAAATGTG
CTCTGTCAATACCCCGGCCCTAATCGCGTCAAGCGTCGGTCTCCAAAAGT
TCACAATTCTGATGTCATTGCCCGACTGGAATCACTTGAGCGCTCCATCG
CGGCTCTAGCTGGAAACCGATTGCTGCCTCACCTTCAGCACGAAGTGGCA
GACGGACGGACCGTTTCTGCACCAGGTGCGGGGTCCCCCTCAAGCAAAGA
ACCGTCCCCGACGGGCACAAATGCGGCGGCGGAGCCATCGCACGACGGCC
TTCTAGTTGAGGACGGCCGGTATATCAATGAACAACTCTTGTCTCGGGTC
CTGGAAGATGAGAAAGAGCTTCAATCTGCCATTGGGACGCCGAAAAGCGA
TACCAGCAGCTCCCGGCGCCCACTCACGCTCAGAGCGGAAGGTCTCCTTG
TCAGTCGCTATGTGGAGGAGGGAGATCTCTATAGCCTGCACCCGTGTCAG
TGGCAGTCGACACAGCTGTGGCAAACCTTCTTGAACCGCATCGACCCAAT
AATCAAGATTCTTCACGTTCCATCGACTCAGCCGCGGATATTCGCGGCTA
TCAACGAGCCAGCGGCCGCGCCCGCTGATCTCCATGCTTTGCTTTTTGCC
ATCTTCTTTGCGGCCACGACAAGTGTGCTTGCCGAGGACCCAGCACATGA
ACAGAGGCGATCAGAAGTCAAGCGATACCAGCAAGGGCTGGAACTTGCTC
TCTATCAGTCGAATTTCTTGGACGCTCCCACACTAACATCGCTGCAAGCG
ATAAGTATCTACCAGATGTGCTTGCGCTATTACAACAGCGGACGATCTGG
ATGGACGATGCGAGGGTTGGTTATCCGGGCAGCACAATCCATTGGACTCC
ACCGTGACGGAAGACACTTCAAGTTGACTCCGCTAGAATGTGAGCTGCGC
CGCCGACTCTGGTGGCACATTTGTACGGCTGATAGTCGCGCGGTCGAGGA
TCATGGAGTCGGTGTCAGTAGTGGCGAGGAGGTCTGCGACACCGCATTTC
CTGCAAATATCGACGATCAGGACCTTTCTGCTACGGCGACGGTGCCACCG
GAGTCCAAAGACTGCTGGACAGAGATGACAGCATCCCTGATCACAACAGT
AGTGAACGAAAAGCGCCTGGAATTGCATCGCACACTGACAACCAAAGTCA
CTGGGAAAGATCCCGCTGAGATAGCGCGGGAAGCAAAAGAGCACGTATAC
AACACCTATATGCAACATGGCGATCCCAACATTCCCATCCAACGACAAGG
AATGATACTAGGGGAGGTTCTAGTACTGAAGATGGAAATGTACTTGAACC
AAAAAGCCCTCCAGACAAATAGCACCGCAATACCGGTCGCGGAGCGTCGT
GAGTTGCAGACCAAAACTCTGGACATCTCCTGCCAAGCCCTCGAACGCAC
CAATGAAATGTTTACCGACGCGCTTCTCCGCGGATATCGCTGGCTTTCTT
CTACATTCATGCCTTACTTTCTCCTCACATACATATTGTGGCACCTCTGT
GTGTATCCAGTGGGGCTGCATGTTGAACGTGCATGGCGAGCAATTAACCT
GGTTTTCGACCTGACCGAGAAGGACCCCCTGTGGCCAAACCCGGGGCCAA
AGTGGGCGATAATCACTCGCCTGCGCGACAAGGCGTTGCATATACGACAG
ATGCAGGTGGCTGCGGAGCAGGCTGCGGGCTCAGCCGATGAGAACCAACC
GACAGGTGCCGATCAAGCGGAGGCGCCAATGGTTGAGTCGTTCTTTGACT
TTGTAAACTGGGATATGGGCGTCCTTGGGTTTCCGGACTGGACTGGCTTA
ATGCAGAGTGTCGACATTACGGGCTTCGAGCATCTGATAGATACTCAGAT
TTGAATGGAATCCGCACGCCGCTATAACGTCGAACGGTCCTGCCTGCGCT
GCCATCAACGCAAGGTCCGCTGCGATAAGAGCTCTCCATGTGGGTCTTGT
ATACGAGCAAATGTGCTCTGTCAATACCCCGGCCCTAATCGCGTCAAGCG
TCGGTCTCCAAAAGTTCACAATTCTGATGTCATTGCCCGACTGGAATCAC
TTGAGCGCTCCATCGCGGCTCTAGCTGGAAACCGATTGCTGCCTCACCTT
CAGCACGAAGTGGCAGACGGACGGACCGTTTCTGCACCAGGTGCGGGGTC
CCCCTCAAGCAAAGAACCGTCCCCGACGGGCACAAATGCGGCGGCGGAGC
CATCGCACGACGGCCTTCTAGTTGAGGACGGCCGGTATATCAATGAACAA
CTCTTGTCTCGGGTCCTGGAAGATGAGAAAGAGCTTCAATCTGCCATTGG
GACGCCGAAAAGCGATACCAGCAGCTCCCGGCGCCCACTCACGCTCAGAG
CGGAAGGTCTCCTTGTCAGTCGCTATGTGGAGGAGGGAGATCTCTATAGC
CTGCACCCGTGTCAGTGGCAGTCGACACAGCTGTGGCAAACCTTCTTGAA
CCGCATCGACCCAATAATCAAGATTCTTCACGTTCCATCGACTCAGCCGC
GGATATTCGCGGCTATCAACGAGCCAGCGGCCGCGCCCGCTGATCTCCAT
GCTTTGCTTTTTGCCATCTTCTTTGCGGCCACGACAAGTGTGCTTGCCGA
GGACCCAGCACATGAACAGAGGCGATCAGAAGTCAAGCGATACCAGCAAG
GGCTGGAACTTGCTCTCTATCAGTCGAATTTCTTGGACGCTCCCACACTA
ACATCGCTGCAAGCGATAAGTATCTACCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010309CBS51388_010309Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010309-T1CBS51388_010309-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010309-T1.cdsCBS51388_010309-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010309-T1.exon2CBS51388_010309-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010309-T1.exon1CBS51388_010309-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteantiSMASH:Cluster_16.3
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR007219
DBxrefPFAM:PF00172
DBxrefPFAM:PF04082
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:1524247..1526272 -
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