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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:1643487..1644424- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010339-T1 ID=CBS51388_010339-T1|Name=CBS51388_010339-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=938bp|location=Sequence derived from alignment at An16:1643487..1644424- (Aspergillus niger CBS 513.88)
ATGGCTTCGCGTTTGGCTAAGAGCGCCCTTGGTATGCCGAACTAGACTCT
TTTCGGCTTGCTTTATCAACTGGCTATGATTGTTAACGCCCCCTAGGTGC
TGCCCGGCTCCGGCCGACCCTTCCCACGCGCAACGTCGCTCCCATCACTG
CCACCTTGACCGCGTCTCGCTCGGTCTCCAACGTTCCCACCGAGGACCCC
AAGAAGAAGGCTCAGTCCATCATCGATGCCCTCCCCGGCAACTCCCTGGT
CTCCAAGACCGCCGTCCTCTCTGCCGCTGCCGGTATCTCCATCGCTGCCA
TCAGCAACGAGCTCTATGTTATGAACGAGGAAACCGTTGCTGCTTTCTGT
CTTCTCAGCGTCTTCACTGCCGTTGCCAAGTACGGTGGTCCTGCTTACCG
TGAGTGGGCTGAGGGTCAGGTTCAGAAGCACAAGGACATCCTGAACGCTG
CCCGTGCCGACCACACCAACGCCGTTAAGCAGCGTATGGAGAACGTCCAG
GAGCTCTCCAGCGTTGTTGAGCTCACTAAGCAGCTGTTCGCTGTTTCCAA
GGTACATTCAGATCCTTTCCATACTCATCCGATCGAAACGTGGTCGGGTT
AGCGGACGCAGGAAGCTAATGGTATATAAAGGAAACCGCTCAGCTTGAGG
CTCAGGCCTACGAGCTTGAGCAGCGCACTGCTCTGGCTACCGAGGCTAAG
CAGGTTCTCGACTCCTGGGTTCGCTACGAGGGCCAGGTTAAGCAGCGCCA
GCAGCGTGAGCTTGCCGAGAGCGTCATCGGCAAGATCCAGAAGGAGCTTG
AGAACCCCAAGGTTCTCCAGCAGATCCTTCAGCAGAGCGTTGCTGATGTT
GAGCGTAAGTTGATTTCTTGTGAGCAGCATTTTTTTGATACAATGCTTAC
GACTATTTACAGGTATCATGTCCTCCAAGGCCCAGTAA back to topCoding sequence (CDS) from alignment at An16:1643487..1644424- >CBS51388_010339-T1 ID=CBS51388_010339-T1|Name=CBS51388_010339-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2940bp|location=Sequence derived from alignment at An16:1643487..1644424- (Aspergillus niger CBS 513.88)
GTATCATGTCCTCCAAGGCCCAGTAAGAAACCGCTCAGCTTGAGGCTCAG
GCCTACGAGCTTGAGCAGCGCACTGCTCTGGCTACCGAGGCTAAGCAGGT
TCTCGACTCCTGGGTTCGCTACGAGGGCCAGGTTAAGCAGCGCCAGCAGC
GTGAGCTTGCCGAGAGCGTCATCGGCAAGATCCAGAAGGAGCTTGAGAAC
CCCAAGGTTCTCCAGCAGATCCTTCAGCAGAGCGTTGCTGATGTTGAGCG
TGCTGCCCGGCTCCGGCCGACCCTTCCCACGCGCAACGTCGCTCCCATCA
CTGCCACCTTGACCGCGTCTCGCTCGGTCTCCAACGTTCCCACCGAGGAC
CCCAAGAAGAAGGCTCAGTCCATCATCGATGCCCTCCCCGGCAACTCCCT
GGTCTCCAAGACCGCCGTCCTCTCTGCCGCTGCCGGTATCTCCATCGCTG
CCATCAGCAACGAGCTCTATGTTATGAACGAGGAAACCGTTGCTGCTTTC
TGTCTTCTCAGCGTCTTCACTGCCGTTGCCAAGTACGGTGGTCCTGCTTA
CCGTGAGTGGGCTGAGGGTCAGGTTCAGAAGCACAAGGACATCCTGAACG
CTGCCCGTGCCGACCACACCAACGCCGTTAAGCAGCGTATGGAGAACGTC
CAGGAGCTCTCCAGCGTTGTTGAGCTCACTAAGCAGCTGTTCGCTGTTTC
CAAGATGGCTTCGCGTTTGGCTAAGAGCGCCCTTGGTATCATGTCCTCCA
AGGCCCAGTAAGAAACCGCTCAGCTTGAGGCTCAGGCCTACGAGCTTGAG
CAGCGCACTGCTCTGGCTACCGAGGCTAAGCAGGTTCTCGACTCCTGGGT
TCGCTACGAGGGCCAGGTTAAGCAGCGCCAGCAGCGTGAGCTTGCCGAGA
GCGTCATCGGCAAGATCCAGAAGGAGCTTGAGAACCCCAAGGTTCTCCAG
CAGATCCTTCAGCAGAGCGTTGCTGATGTTGAGCGTGCTGCCCGGCTCCG
GCCGACCCTTCCCACGCGCAACGTCGCTCCCATCACTGCCACCTTGACCG
CGTCTCGCTCGGTCTCCAACGTTCCCACCGAGGACCCCAAGAAGAAGGCT
CAGTCCATCATCGATGCCCTCCCCGGCAACTCCCTGGTCTCCAAGACCGC
CGTCCTCTCTGCCGCTGCCGGTATCTCCATCGCTGCCATCAGCAACGAGC
TCTATGTTATGAACGAGGAAACCGTTGCTGCTTTCTGTCTTCTCAGCGTC
TTCACTGCCGTTGCCAAGTACGGTGGTCCTGCTTACCGTGAGTGGGCTGA
GGGTCAGGTTCAGAAGCACAAGGACATCCTGAACGCTGCCCGTGCCGACC
ACACCAACGCCGTTAAGCAGCGTATGGAGAACGTCCAGGAGCTCTCCAGC
GTTGTTGAGCTCACTAAGCAGCTGTTCGCTGTTTCCAAGATGGCTTCGCG
TTTGGCTAAGAGCGCCCTTGGTATCATGTCCTCCAAGGCCCAGTAAGAAA
CCGCTCAGCTTGAGGCTCAGGCCTACGAGCTTGAGCAGCGCACTGCTCTG
GCTACCGAGGCTAAGCAGGTTCTCGACTCCTGGGTTCGCTACGAGGGCCA
GGTTAAGCAGCGCCAGCAGCGTGAGCTTGCCGAGAGCGTCATCGGCAAGA
TCCAGAAGGAGCTTGAGAACCCCAAGGTTCTCCAGCAGATCCTTCAGCAG
AGCGTTGCTGATGTTGAGCGTGCTGCCCGGCTCCGGCCGACCCTTCCCAC
GCGCAACGTCGCTCCCATCACTGCCACCTTGACCGCGTCTCGCTCGGTCT
CCAACGTTCCCACCGAGGACCCCAAGAAGAAGGCTCAGTCCATCATCGAT
GCCCTCCCCGGCAACTCCCTGGTCTCCAAGACCGCCGTCCTCTCTGCCGC
TGCCGGTATCTCCATCGCTGCCATCAGCAACGAGCTCTATGTTATGAACG
AGGAAACCGTTGCTGCTTTCTGTCTTCTCAGCGTCTTCACTGCCGTTGCC
AAGTACGGTGGTCCTGCTTACCGTGAGTGGGCTGAGGGTCAGGTTCAGAA
GCACAAGGACATCCTGAACGCTGCCCGTGCCGACCACACCAACGCCGTTA
AGCAGCGTATGGAGAACGTCCAGGAGCTCTCCAGCGTTGTTGAGCTCACT
AAGCAGCTGTTCGCTGTTTCCAAGATGGCTTCGCGTTTGGCTAAGAGCGC
CCTTGGTATCATGTCCTCCAAGGCCCAGTAAGAAACCGCTCAGCTTGAGG
CTCAGGCCTACGAGCTTGAGCAGCGCACTGCTCTGGCTACCGAGGCTAAG
CAGGTTCTCGACTCCTGGGTTCGCTACGAGGGCCAGGTTAAGCAGCGCCA
GCAGCGTGAGCTTGCCGAGAGCGTCATCGGCAAGATCCAGAAGGAGCTTG
AGAACCCCAAGGTTCTCCAGCAGATCCTTCAGCAGAGCGTTGCTGATGTT
GAGCGTGCTGCCCGGCTCCGGCCGACCCTTCCCACGCGCAACGTCGCTCC
CATCACTGCCACCTTGACCGCGTCTCGCTCGGTCTCCAACGTTCCCACCG
AGGACCCCAAGAAGAAGGCTCAGTCCATCATCGATGCCCTCCCCGGCAAC
TCCCTGGTCTCCAAGACCGCCGTCCTCTCTGCCGCTGCCGGTATCTCCAT
CGCTGCCATCAGCAACGAGCTCTATGTTATGAACGAGGAAACCGTTGCTG
CTTTCTGTCTTCTCAGCGTCTTCACTGCCGTTGCCAAGTACGGTGGTCCT
GCTTACCGTGAGTGGGCTGAGGGTCAGGTTCAGAAGCACAAGGACATCCT
GAACGCTGCCCGTGCCGACCACACCAACGCCGTTAAGCAGCGTATGGAGA
ACGTCCAGGAGCTCTCCAGCGTTGTTGAGCTCACTAAGCAGCTGTTCGCT
GTTTCCAAGATGGCTTCGCGTTTGGCTAAGAGCGCCCTTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0015078 | proton transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0015986 | ATP synthesis coupled proton transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264PE5 |
| DBxref | InterPro:IPR008688 |
| DBxref | PFAM:PF05405 |
| Product | atp4 subunit B of the stator stalk of mitochondrial F1F0 ATP synthase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:1643487..1644424 - |
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