You are here

Home

CBS51388_010347-T1, CBS51388_010347-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010347-T1
Unique NameCBS51388_010347-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An16:1663403..1664462-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010347-T1 ID=CBS51388_010347-T1|Name=CBS51388_010347-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1060bp|location=Sequence derived from alignment at An16:1663403..1664462- (Aspergillus niger CBS 513.88)
ATGGCTCTGCAAGGCGTTGAGCAGACGATCCTTCGGGATCCGGCTCTATT
GTGAGTTTATTGCTCCAGACTGGGCGTGATTTGATGTGAAATGCTGATGT
GATCGACTCGCACCTCTAGCTACTGGATTGTGTTCCCTATCACTGTTGTT
ATGGTATGCGAGCCCTCCTCTACTCTATAAGAGACAGGGATATATGCTAA
TCGTATATTCCACAGATTCTGACAGGTATCCTCCGTCACTATGCCACCGT
CCTGATGAACAACCCCCCGAAGCCGGCTTCGACGCTGGCCGAATCCCGCG
AACGTCTCGGACTCATTCGCGGCGTCAACCTCCGGAACAACGCCTCCGTG
CTCTCGAAGGAGTCCTTCGAGATGCGGAAGAACTACCTCGTTTCTGCCTA
CCAGAGCGGCGCTTTCCTCAAGGACCCTGCTAGTCGCGGCCAGCCGCCTG
CAAATCCAATGACCGATCCTGCTGGCATGGAGGCCATGATGGGCATGATG
AAGGGGAATATGATGATGATGATCCCACAGACGCTGATTATGAGCTGGAT
TAATGCGTTCTTTTCGGGTTTCGTGATTTGTAGGTCTTATCTGATATGTT
TTTGGAAAGGGAGTGAGCTGACAAGAGTGCTAGTGAAATTGCCCTTCCCG
CTTACCATTCGGTTCAAGTCAATGCTGCAGTCTGGTGTTATGACCCGGGA
TTTGGATGTTAGATGGGTGTCCAGTCTTTCGTGGTATTTCTTGAACTTGT
TTGGACTGCAGTCGGTCTTTGGGTTTATTTTGGGCAGTGATAATGGTTAG
TTCACTGTGTTTGCCTCATTATCGTTTCTATTATCTTTGTTTGAGTGTGC
TGACAGTTTGCTTTAGCGGCCAACCACATGGCTTCGCAGATGGCGTCGAT
GAACCCTGCCGCTGGGATTAACCCGTTCCAGCCGGGCCAGGATCCCGATA
AGTTGTACCAGAGCGAGGCTGAGAACCTGGAGGTCATTGAGCACTTTTGC
ATTCTGGACGGCGTTGAGGAGAGAGTGCTGGCTCATTACGCGGGTAGGAA
AAGCTATTAG
back to top

Coding sequence (CDS) from alignment at An16:1663403..1664462-

>CBS51388_010347-T1 ID=CBS51388_010347-T1|Name=CBS51388_010347-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4020bp|location=Sequence derived from alignment at An16:1663403..1664462- (Aspergillus niger CBS 513.88)
CGGCCAACCACATGGCTTCGCAGATGGCGTCGATGAACCCTGCCGCTGGG
ATTAACCCGTTCCAGCCGGGCCAGGATCCCGATAAGTTGTACCAGAGCGA
GGCTGAGAACCTGGAGGTCATTGAGCACTTTTGCATTCTGGACGGCGTTG
AGGAGAGAGTGCTGGCTCATTACGCGGGTAGGAAAAGCTATTAGTGAAAT
TGCCCTTCCCGCTTACCATTCGGTTCAAGTCAATGCTGCAGTCTGGTGTT
ATGACCCGGGATTTGGATGTTAGATGGGTGTCCAGTCTTTCGTGGTATTT
CTTGAACTTGTTTGGACTGCAGTCGGTCTTTGGGTTTATTTTGGGCAGTG
ATAATGATTCTGACAGGTATCCTCCGTCACTATGCCACCGTCCTGATGAA
CAACCCCCCGAAGCCGGCTTCGACGCTGGCCGAATCCCGCGAACGTCTCG
GACTCATTCGCGGCGTCAACCTCCGGAACAACGCCTCCGTGCTCTCGAAG
GAGTCCTTCGAGATGCGGAAGAACTACCTCGTTTCTGCCTACCAGAGCGG
CGCTTTCCTCAAGGACCCTGCTAGTCGCGGCCAGCCGCCTGCAAATCCAA
TGACCGATCCTGCTGGCATGGAGGCCATGATGGGCATGATGAAGGGGAAT
ATGATGATGATGATCCCACAGACGCTGATTATGAGCTGGATTAATGCGTT
CTTTTCGGGTTTCGTGATTTCTACTGGATTGTGTTCCCTATCACTGTTGT
TATGATGGCTCTGCAAGGCGTTGAGCAGACGATCCTTCGGGATCCGGCTC
TATTCGGCCAACCACATGGCTTCGCAGATGGCGTCGATGAACCCTGCCGC
TGGGATTAACCCGTTCCAGCCGGGCCAGGATCCCGATAAGTTGTACCAGA
GCGAGGCTGAGAACCTGGAGGTCATTGAGCACTTTTGCATTCTGGACGGC
GTTGAGGAGAGAGTGCTGGCTCATTACGCGGGTAGGAAAAGCTATTAGTG
AAATTGCCCTTCCCGCTTACCATTCGGTTCAAGTCAATGCTGCAGTCTGG
TGTTATGACCCGGGATTTGGATGTTAGATGGGTGTCCAGTCTTTCGTGGT
ATTTCTTGAACTTGTTTGGACTGCAGTCGGTCTTTGGGTTTATTTTGGGC
AGTGATAATGATTCTGACAGGTATCCTCCGTCACTATGCCACCGTCCTGA
TGAACAACCCCCCGAAGCCGGCTTCGACGCTGGCCGAATCCCGCGAACGT
CTCGGACTCATTCGCGGCGTCAACCTCCGGAACAACGCCTCCGTGCTCTC
GAAGGAGTCCTTCGAGATGCGGAAGAACTACCTCGTTTCTGCCTACCAGA
GCGGCGCTTTCCTCAAGGACCCTGCTAGTCGCGGCCAGCCGCCTGCAAAT
CCAATGACCGATCCTGCTGGCATGGAGGCCATGATGGGCATGATGAAGGG
GAATATGATGATGATGATCCCACAGACGCTGATTATGAGCTGGATTAATG
CGTTCTTTTCGGGTTTCGTGATTTCTACTGGATTGTGTTCCCTATCACTG
TTGTTATGATGGCTCTGCAAGGCGTTGAGCAGACGATCCTTCGGGATCCG
GCTCTATTCGGCCAACCACATGGCTTCGCAGATGGCGTCGATGAACCCTG
CCGCTGGGATTAACCCGTTCCAGCCGGGCCAGGATCCCGATAAGTTGTAC
CAGAGCGAGGCTGAGAACCTGGAGGTCATTGAGCACTTTTGCATTCTGGA
CGGCGTTGAGGAGAGAGTGCTGGCTCATTACGCGGGTAGGAAAAGCTATT
AGTGAAATTGCCCTTCCCGCTTACCATTCGGTTCAAGTCAATGCTGCAGT
CTGGTGTTATGACCCGGGATTTGGATGTTAGATGGGTGTCCAGTCTTTCG
TGGTATTTCTTGAACTTGTTTGGACTGCAGTCGGTCTTTGGGTTTATTTT
GGGCAGTGATAATGATTCTGACAGGTATCCTCCGTCACTATGCCACCGTC
CTGATGAACAACCCCCCGAAGCCGGCTTCGACGCTGGCCGAATCCCGCGA
ACGTCTCGGACTCATTCGCGGCGTCAACCTCCGGAACAACGCCTCCGTGC
TCTCGAAGGAGTCCTTCGAGATGCGGAAGAACTACCTCGTTTCTGCCTAC
CAGAGCGGCGCTTTCCTCAAGGACCCTGCTAGTCGCGGCCAGCCGCCTGC
AAATCCAATGACCGATCCTGCTGGCATGGAGGCCATGATGGGCATGATGA
AGGGGAATATGATGATGATGATCCCACAGACGCTGATTATGAGCTGGATT
AATGCGTTCTTTTCGGGTTTCGTGATTTCTACTGGATTGTGTTCCCTATC
ACTGTTGTTATGATGGCTCTGCAAGGCGTTGAGCAGACGATCCTTCGGGA
TCCGGCTCTATTCGGCCAACCACATGGCTTCGCAGATGGCGTCGATGAAC
CCTGCCGCTGGGATTAACCCGTTCCAGCCGGGCCAGGATCCCGATAAGTT
GTACCAGAGCGAGGCTGAGAACCTGGAGGTCATTGAGCACTTTTGCATTC
TGGACGGCGTTGAGGAGAGAGTGCTGGCTCATTACGCGGGTAGGAAAAGC
TATTAGTGAAATTGCCCTTCCCGCTTACCATTCGGTTCAAGTCAATGCTG
CAGTCTGGTGTTATGACCCGGGATTTGGATGTTAGATGGGTGTCCAGTCT
TTCGTGGTATTTCTTGAACTTGTTTGGACTGCAGTCGGTCTTTGGGTTTA
TTTTGGGCAGTGATAATGATTCTGACAGGTATCCTCCGTCACTATGCCAC
CGTCCTGATGAACAACCCCCCGAAGCCGGCTTCGACGCTGGCCGAATCCC
GCGAACGTCTCGGACTCATTCGCGGCGTCAACCTCCGGAACAACGCCTCC
GTGCTCTCGAAGGAGTCCTTCGAGATGCGGAAGAACTACCTCGTTTCTGC
CTACCAGAGCGGCGCTTTCCTCAAGGACCCTGCTAGTCGCGGCCAGCCGC
CTGCAAATCCAATGACCGATCCTGCTGGCATGGAGGCCATGATGGGCATG
ATGAAGGGGAATATGATGATGATGATCCCACAGACGCTGATTATGAGCTG
GATTAATGCGTTCTTTTCGGGTTTCGTGATTTCTACTGGATTGTGTTCCC
TATCACTGTTGTTATGATGGCTCTGCAAGGCGTTGAGCAGACGATCCTTC
GGGATCCGGCTCTATTCGGCCAACCACATGGCTTCGCAGATGGCGTCGAT
GAACCCTGCCGCTGGGATTAACCCGTTCCAGCCGGGCCAGGATCCCGATA
AGTTGTACCAGAGCGAGGCTGAGAACCTGGAGGTCATTGAGCACTTTTGC
ATTCTGGACGGCGTTGAGGAGAGAGTGCTGGCTCATTACGCGGGTAGGAA
AAGCTATTAGTGAAATTGCCCTTCCCGCTTACCATTCGGTTCAAGTCAAT
GCTGCAGTCTGGTGTTATGACCCGGGATTTGGATGTTAGATGGGTGTCCA
GTCTTTCGTGGTATTTCTTGAACTTGTTTGGACTGCAGTCGGTCTTTGGG
TTTATTTTGGGCAGTGATAATGATTCTGACAGGTATCCTCCGTCACTATG
CCACCGTCCTGATGAACAACCCCCCGAAGCCGGCTTCGACGCTGGCCGAA
TCCCGCGAACGTCTCGGACTCATTCGCGGCGTCAACCTCCGGAACAACGC
CTCCGTGCTCTCGAAGGAGTCCTTCGAGATGCGGAAGAACTACCTCGTTT
CTGCCTACCAGAGCGGCGCTTTCCTCAAGGACCCTGCTAGTCGCGGCCAG
CCGCCTGCAAATCCAATGACCGATCCTGCTGGCATGGAGGCCATGATGGG
CATGATGAAGGGGAATATGATGATGATGATCCCACAGACGCTGATTATGA
GCTGGATTAATGCGTTCTTTTCGGGTTTCGTGATTTCTACTGGATTGTGT
TCCCTATCACTGTTGTTATGATGGCTCTGCAAGGCGTTGAGCAGACGATC
CTTCGGGATCCGGCTCTATT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010347CBS51388_010347Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010347-T1CBS51388_010347-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010347-T1.cdsCBS51388_010347-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010347-T1.exon5CBS51388_010347-T1.exon5Aspergillus niger CBS 513.88exon
CBS51388_010347-T1.exon4CBS51388_010347-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_010347-T1.exon3CBS51388_010347-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_010347-T1.exon2CBS51388_010347-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010347-T1.exon1CBS51388_010347-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG0926431P
DBxrefInterPro:IPR008568
DBxrefInterPro:IPR002809
DBxrefPFAM:PF01956
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An16supercontigAn16:1663403..1664462 -
Powered by Drupal