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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:1673286..1673911+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010352-T1 ID=CBS51388_010352-T1|Name=CBS51388_010352-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=626bp|location=Sequence derived from alignment at An16:1673286..1673911+ (Aspergillus niger CBS 513.88)
ATGTTTTTCCTTAAAGAAGAGGTCAAGGTCATCACCTTGCACCCGTCCTA
CTTCGGGCCCAACATGCGCGAGTATCTCATCAACCGGTTAAACGAGGAGG
AGGAAGGACGTTGTACGGGCGACCACTTCGTAATCTGTGTGATGGACATG
GTTGATATTGGCGAAGGACGGGTGCTCCCAGGCAGCGGACAGGCAGAATA
TACTATCAAGTATCGGGCAATCATCTGGAAGCCCTTCCGCGGAGAGACCG
TACGTCTTGGAGTTGCATTGAACAGGGCTGCATTTGATTCTGACCATAGC
CTTGTAGGTCGATGCGATTGTTACGTCTGTCAAGCCCACCGGTATATTTA
CTTTGGCCGGTCCATTGTCTGTTTTTATTGCACGGAAAGTATGTCAACGA
CCGAGTTTGAGTTGGATCACTTAGCCTTATCGGTTGCTAACGAGTTGGCA
AGAACATTCCTTCCGACATCAAGTGGGAACCGAACACAGTACCGCCGCAA
TATACGGACCATGCGGACCAAGTCATCGAGAAGGGAACCAGTTTACGGCT
TAAGATTCTTGGTGTGAAGCCCGACGTTGCGGCGATCAATGCCATTGGAA
CGATCAAGGAAGATTATCTCGGGTGA back to topCoding sequence (CDS) from alignment at An16:1673286..1673911+ >CBS51388_010352-T1 ID=CBS51388_010352-T1|Name=CBS51388_010352-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1512bp|location=Sequence derived from alignment at An16:1673286..1673911+ (Aspergillus niger CBS 513.88)
ATGTTTTTCCTTAAAGAAGAGGTCAAGGTCATCACCTTGCACCCGTCCTA
CTTCGGGCCCAACATGCGCGAGTATCTCATCAACCGGTTAAACGAGGAGG
AGGAAGGACGTTGTACGGGCGACCACTTCGTAATCTGTGTGATGGACATG
GTTGATATTGGCGAAGGACGGGTGCTCCCAGGCAGCGGACAGGCAGAATA
TACTATCAAGTATCGGGCAATCATCTGGAAGCCCTTCCGCGGAGAGACCG
TCGATGCGATTGTTACGTCTGTCAAGCCCACCGGTATATTTACTTTGGCC
GGTCCATTGTCTGTTTTTATTGCACGGAAAAACATTCCTTCCGACATCAA
GTGGGAACCGAACACAGTACCGCCGCAATATACGGACCATGCGGACCAAG
TCATCGAGAAGGGAACCAGTTTACGGCTTAAGATTCTTGGTGTGAAGCCC
GACGTTGCGGCGATCAATGCCATTGGAACGATCAAGGAAGATTATCTCGG
GTGAATGTTTTTCCTTAAAGAAGAGGTCAAGGTCATCACCTTGCACCCGT
CCTACTTCGGGCCCAACATGCGCGAGTATCTCATCAACCGGTTAAACGAG
GAGGAGGAAGGACGTTGTACGGGCGACCACTTCGTAATCTGTGTGATGGA
CATGGTTGATATTGGCGAAGGACGGGTGCTCCCAGGCAGCGGACAGGCAG
AATATACTATCAAGTATCGGGCAATCATCTGGAAGCCCTTCCGCGGAGAG
ACCGTCGATGCGATTGTTACGTCTGTCAAGCCCACCGGTATATTTACTTT
GGCCGGTCCATTGTCTGTTTTTATTGCACGGAAAAACATTCCTTCCGACA
TCAAGTGGGAACCGAACACAGTACCGCCGCAATATACGGACCATGCGGAC
CAAGTCATCGAGAAGGGAACCAGTTTACGGCTTAAGATTCTTGGTGTGAA
GCCCGACGTTGCGGCGATCAATGCCATTGGAACGATCAAGGAAGATTATC
TCGGGTGAATGTTTTTCCTTAAAGAAGAGGTCAAGGTCATCACCTTGCAC
CCGTCCTACTTCGGGCCCAACATGCGCGAGTATCTCATCAACCGGTTAAA
CGAGGAGGAGGAAGGACGTTGTACGGGCGACCACTTCGTAATCTGTGTGA
TGGACATGGTTGATATTGGCGAAGGACGGGTGCTCCCAGGCAGCGGACAG
GCAGAATATACTATCAAGTATCGGGCAATCATCTGGAAGCCCTTCCGCGG
AGAGACCGTCGATGCGATTGTTACGTCTGTCAAGCCCACCGGTATATTTA
CTTTGGCCGGTCCATTGTCTGTTTTTATTGCACGGAAAAACATTCCTTCC
GACATCAAGTGGGAACCGAACACAGTACCGCCGCAATATACGGACCATGC
GGACCAAGTCATCGAGAAGGGAACCAGTTTACGGCTTAAGATTCTTGGTG
TGAAGCCCGACGTTGCGGCGATCAATGCCATTGGAACGATCAAGGAAGAT
TATCTCGGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264RW6 |
| DBxref | InterPro:IPR012340 |
| DBxref | InterPro:IPR036898 |
| DBxref | InterPro:IPR003029 |
| DBxref | InterPro:IPR005576 |
| DBxref | PFAM:PF03876 |
| DBxref | PFAM:PF00575 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:1673286..1673911 + |
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