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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:1771819..1772488+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010379-T1 ID=CBS51388_010379-T1|Name=CBS51388_010379-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=670bp|location=Sequence derived from alignment at An16:1771819..1772488+ (Aspergillus niger CBS 513.88)
ATGCCTCAAGCCCAGCCCGAGTTGAAGAAGGTATGATATTCGCGATTAAT
ACCCCGCCAAACTTTCCCCGATACAGAGCACCGAAGCTAACATTGCGGTT
TTCCAACAGTACATGGAAAAGCGGGTATTCTGCCAACTGAACGGCAACCG
CAAAGTCATTGGTATCCTGCGAGGCTATGATGTACGTCGCGCTTGTGCCC
CCTGGATTTCTACTTTCCTGCCTGCTGTGTTGCTGTTATACGGGTTGATA
TGCCTTGGATGGGGTCGAAGATTGAGATGTTCTTGGGTTCAATCCATCGA
GTGAAAGAGGGGGCGGGGAGAGTGTGTGTATGTGTGTATAGGTTACTGAC
GTCTGCGCTTGTCTATACAGGTGTTCATGAACATTGTCCTTGACGAGGCT
TTCGAGGAGAAGCAGGGTGGTGAGAAGGTTGCTATCGGCATGATTGTATG
TGGCTAGTCCCATTCCCGGACGTCTACGTTTGGTCTGCAAACTGGGAGGG
GCAGGAAGCTAATGGCTATCTATTCGTCTTAATAGGTCATTCGCGGTAAC
TCGGTTGTTATGCTCGAGGTCAGTATCACCTGCCATAGGACTACGATTGA
TGGCGTGCCTTATCAAGAGACTAACCTTTTGTACTTAAAATAGGCCCTGG
AACGTATCAGCGACAAATAA back to topCoding sequence (CDS) from alignment at An16:1771819..1772488+ >CBS51388_010379-T1 ID=CBS51388_010379-T1|Name=CBS51388_010379-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1350bp|location=Sequence derived from alignment at An16:1771819..1772488+ (Aspergillus niger CBS 513.88)
ATGCCTCAAGCCCAGCCCGAGTTGAAGAAGAGCACCGAAGCTAACATTGC
GGTTTTCCAACAGTACATGGAAAAGCGGGTATTCTGCCAACTGAACGGCA
ACCGCAAAGTCATTGGTATCCTGCGAGGCTATGATGTGTTCATGAACATT
GTCCTTGACGAGGCTTTCGAGGAGAAGCAGGGTGGTGAGAAGGTTGCTAT
CGGCATGATTGTCATTCGCGGTAACTCGGTTGTTATGCTCGAGGCCCTGG
AACGTATCAGCGACAAATAAATGCCTCAAGCCCAGCCCGAGTTGAAGAAG
AGCACCGAAGCTAACATTGCGGTTTTCCAACAGTACATGGAAAAGCGGGT
ATTCTGCCAACTGAACGGCAACCGCAAAGTCATTGGTATCCTGCGAGGCT
ATGATGTGTTCATGAACATTGTCCTTGACGAGGCTTTCGAGGAGAAGCAG
GGTGGTGAGAAGGTTGCTATCGGCATGATTGTCATTCGCGGTAACTCGGT
TGTTATGCTCGAGGCCCTGGAACGTATCAGCGACAAATAAATGCCTCAAG
CCCAGCCCGAGTTGAAGAAGAGCACCGAAGCTAACATTGCGGTTTTCCAA
CAGTACATGGAAAAGCGGGTATTCTGCCAACTGAACGGCAACCGCAAAGT
CATTGGTATCCTGCGAGGCTATGATGTGTTCATGAACATTGTCCTTGACG
AGGCTTTCGAGGAGAAGCAGGGTGGTGAGAAGGTTGCTATCGGCATGATT
GTCATTCGCGGTAACTCGGTTGTTATGCTCGAGGCCCTGGAACGTATCAG
CGACAAATAAATGCCTCAAGCCCAGCCCGAGTTGAAGAAGAGCACCGAAG
CTAACATTGCGGTTTTCCAACAGTACATGGAAAAGCGGGTATTCTGCCAA
CTGAACGGCAACCGCAAAGTCATTGGTATCCTGCGAGGCTATGATGTGTT
CATGAACATTGTCCTTGACGAGGCTTTCGAGGAGAAGCAGGGTGGTGAGA
AGGTTGCTATCGGCATGATTGTCATTCGCGGTAACTCGGTTGTTATGCTC
GAGGCCCTGGAACGTATCAGCGACAAATAAATGCCTCAAGCCCAGCCCGA
GTTGAAGAAGAGCACCGAAGCTAACATTGCGGTTTTCCAACAGTACATGG
AAAAGCGGGTATTCTGCCAACTGAACGGCAACCGCAAAGTCATTGGTATC
CTGCGAGGCTATGATGTGTTCATGAACATTGTCCTTGACGAGGCTTTCGA
GGAGAAGCAGGGTGGTGAGAAGGTTGCTATCGGCATGATTGTCATTCGCG
GTAACTCGGTTGTTATGCTCGAGGCCCTGGAACGTATCAGCGACAAATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005681 | spliceosomal complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000387 | spliceosomal snRNP assembly |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010920 |
| DBxref | InterPro:IPR034098 |
| DBxref | InterPro:IPR001163 |
| DBxref | PFAM:PF01423 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:1771819..1772488 + |
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