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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:1908180..1910216+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010424-T1 ID=CBS51388_010424-T1|Name=CBS51388_010424-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2037bp|location=Sequence derived from alignment at An16:1908180..1910216+ (Aspergillus niger CBS 513.88)
ATGCTTCTCAGCGAACGCTTAGTCCCGACCCCACAGCGTCAGACCGCCAT
GGACCGACTCCTGAACTCGCTCGAAGACCGGAGCGCCAATCTGGAACAAC
AGGCTACAGATGACAAAGAGGGAACAGCGCCAGTGCCCAAGGTTGCCAGG
CTACTGCGTGATGGTCAAGGCAAATTCATGTACGTTGGCGACTCCGCCAG
CTTGTCTTTCCTACAGAGTGTGCGGAGGATCGTATCGACCTCTATCGGCA
GATGCGAATTCACGGAGGACAACTCGCGACATTCGATGCTCGAGGCATTC
CAGAGTGGATCTACAACGCAGACAGGACCATTGATATCGCCACCAAGCAA
CGAAGAGGCTCAGAGGCTGGCGCGCCAATTTGTGCTGGCCACAAGCCCGC
TGCTGGATCTGTTCGACCTCAACGAGTTTCACCCCCGGCTTGCGAATTGG
GTTGAGAATCCGAGGGGTGATGAGGATACTGTCAGCTCGATTTTCTATCT
CGTGCTCGCCATCGGCGCGCAGGTGTCCGATATCAATCAATCCCTGGCTG
AGCAGTACTTCGTCAGCGGCCGTCAGTTAGCGTTTTCTGCCTTCACGGAG
ACCCCGAGTATATATACCATTCAGTCGTATGTTTTGATCTCGATGTATAT
GTTGGGAGCCTGTCGACGGAACGGAGCTTTTATGAATTTGGGAATCGCGC
TCCGTGCCGCGTATGCGGTCGGAATTCACCGGAAAGATGCAAATGCGCTT
TTCTGCACCCGAGAACGGCGGGCTCGAGAACGGGTATGGAAGAGTCTTCG
TATGATGGATCTGTACCTTTGTGCCTCATTAGGACGTCCTCCTGCGACAC
TAGACTTTGACTATGATCTGCGTGAAGAGGGAACCTCACCAGGGGAGCAA
CAGCGCCTTCATCCGGACGAGCAGTTGTCTATGACGGTGATCTCACTCTG
CCGAATCTTCGAACGTATTCTGACCGAGGTCTACATGCGTCAAGTCGTCT
CGATCAATGTTGCAGAAACTATATCGAATCAGCATCGAGCTTGGGTGCGC
AATCTCCCAGTATTTCTGCAGATGCAGACTGAGCGGCTGGATTCCAAGAC
GCTGGAAGGCACCTTATCTGCAGCACACATCTTTGGTTCCTACTACTGGT
CGATTATTCTTCTTACTCGACCATTCCTCATCTTCCGAGTGTCCCAATAT
GTGCGGAATAGAACCGAGGCAACAGGGTCCTCCGACAGCAGGGCCAGCAA
CTCCCGCATTGCGTTATTTGCCGACGCATGTGTTTATTCTGCCTTGCGCG
GACTCAACATCGTGGATGACCTTTCTCGCTACAACACCCTCCCGCGCAGA
CTCCCATTCCTTATCAATTCCGTCTTCAACTCAGCCGTGGTGCTTGGAGC
CGCTTTCTTTGCCGACTACGACAACCTGCTCCCGCTTGAAGAAGGCATGG
ACAAGGCGGAGAAATTCCTAGGCCTCTTCGTACCCCACGACCCACACGCA
TGTCGCTTCTTCCAGATCATCAAATACCTTCGAGGTGCAGTGGCGGAGTA
TGTCCGTCGACGAAATCGCCATTGGATGGAGCGTCGCAGCCGACAAGTCG
ACCAGCTCTTCGGCCAAGTCGGGCCCACCAAAGAAAACCCCATGGCTGAA
ACAAACACCCCGAGCAGTCATCGTGGAGAACCCACCGCTGTACCATCACC
TTTATCCCCCGACAAGCTCACCGGAGCATCTGCCTCTCAGCCGCCCGACC
TAGCTACAAGCACCACTACCACCACTGGCCCAACCGACAGTGACATTTGG
GATACGCTCTATGGCGCACAAGGCGCCAGCACACTACCATACGACACCGC
AATCTCTACCCTCACCACAACCGGAATTCCAATCGGCTGTTCCCCCGGCG
GGACCATCCCTGCCGGTGGAATGCCCCCGGATGCTCCAGGGGCGCAAACC
CCGCTCTCGGACGTGATTCTCCCAGACAATGGCCTGCTCTATATGGCCGA
AGACCTTCCTGTATTTGGGATTTGGGAAGATGCTTGA back to topCoding sequence (CDS) from alignment at An16:1908180..1910216+ >CBS51388_010424-T1 ID=CBS51388_010424-T1|Name=CBS51388_010424-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2037bp|location=Sequence derived from alignment at An16:1908180..1910216+ (Aspergillus niger CBS 513.88)
ATGCTTCTCAGCGAACGCTTAGTCCCGACCCCACAGCGTCAGACCGCCAT
GGACCGACTCCTGAACTCGCTCGAAGACCGGAGCGCCAATCTGGAACAAC
AGGCTACAGATGACAAAGAGGGAACAGCGCCAGTGCCCAAGGTTGCCAGG
CTACTGCGTGATGGTCAAGGCAAATTCATGTACGTTGGCGACTCCGCCAG
CTTGTCTTTCCTACAGAGTGTGCGGAGGATCGTATCGACCTCTATCGGCA
GATGCGAATTCACGGAGGACAACTCGCGACATTCGATGCTCGAGGCATTC
CAGAGTGGATCTACAACGCAGACAGGACCATTGATATCGCCACCAAGCAA
CGAAGAGGCTCAGAGGCTGGCGCGCCAATTTGTGCTGGCCACAAGCCCGC
TGCTGGATCTGTTCGACCTCAACGAGTTTCACCCCCGGCTTGCGAATTGG
GTTGAGAATCCGAGGGGTGATGAGGATACTGTCAGCTCGATTTTCTATCT
CGTGCTCGCCATCGGCGCGCAGGTGTCCGATATCAATCAATCCCTGGCTG
AGCAGTACTTCGTCAGCGGCCGTCAGTTAGCGTTTTCTGCCTTCACGGAG
ACCCCGAGTATATATACCATTCAGTCGTATGTTTTGATCTCGATGTATAT
GTTGGGAGCCTGTCGACGGAACGGAGCTTTTATGAATTTGGGAATCGCGC
TCCGTGCCGCGTATGCGGTCGGAATTCACCGGAAAGATGCAAATGCGCTT
TTCTGCACCCGAGAACGGCGGGCTCGAGAACGGGTATGGAAGAGTCTTCG
TATGATGGATCTGTACCTTTGTGCCTCATTAGGACGTCCTCCTGCGACAC
TAGACTTTGACTATGATCTGCGTGAAGAGGGAACCTCACCAGGGGAGCAA
CAGCGCCTTCATCCGGACGAGCAGTTGTCTATGACGGTGATCTCACTCTG
CCGAATCTTCGAACGTATTCTGACCGAGGTCTACATGCGTCAAGTCGTCT
CGATCAATGTTGCAGAAACTATATCGAATCAGCATCGAGCTTGGGTGCGC
AATCTCCCAGTATTTCTGCAGATGCAGACTGAGCGGCTGGATTCCAAGAC
GCTGGAAGGCACCTTATCTGCAGCACACATCTTTGGTTCCTACTACTGGT
CGATTATTCTTCTTACTCGACCATTCCTCATCTTCCGAGTGTCCCAATAT
GTGCGGAATAGAACCGAGGCAACAGGGTCCTCCGACAGCAGGGCCAGCAA
CTCCCGCATTGCGTTATTTGCCGACGCATGTGTTTATTCTGCCTTGCGCG
GACTCAACATCGTGGATGACCTTTCTCGCTACAACACCCTCCCGCGCAGA
CTCCCATTCCTTATCAATTCCGTCTTCAACTCAGCCGTGGTGCTTGGAGC
CGCTTTCTTTGCCGACTACGACAACCTGCTCCCGCTTGAAGAAGGCATGG
ACAAGGCGGAGAAATTCCTAGGCCTCTTCGTACCCCACGACCCACACGCA
TGTCGCTTCTTCCAGATCATCAAATACCTTCGAGGTGCAGTGGCGGAGTA
TGTCCGTCGACGAAATCGCCATTGGATGGAGCGTCGCAGCCGACAAGTCG
ACCAGCTCTTCGGCCAAGTCGGGCCCACCAAAGAAAACCCCATGGCTGAA
ACAAACACCCCGAGCAGTCATCGTGGAGAACCCACCGCTGTACCATCACC
TTTATCCCCCGACAAGCTCACCGGAGCATCTGCCTCTCAGCCGCCCGACC
TAGCTACAAGCACCACTACCACCACTGGCCCAACCGACAGTGACATTTGG
GATACGCTCTATGGCGCACAAGGCGCCAGCACACTACCATACGACACCGC
AATCTCTACCCTCACCACAACCGGAATTCCAATCGGCTGTTCCCCCGGCG
GGACCATCCCTGCCGGTGGAATGCCCCCGGATGCTCCAGGGGCGCAAACC
CCGCTCTCGGACGTGATTCTCCCAGACAATGGCCTGCTCTATATGGCCGA
AGACCTTCCTGTATTTGGGATTTGGGAAGATGCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:1908180..1910216 + |
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