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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:1926786..1928185+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010430-T1 ID=CBS51388_010430-T1|Name=CBS51388_010430-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1400bp|location=Sequence derived from alignment at An16:1926786..1928185+ (Aspergillus niger CBS 513.88)
ATGGATCCCAAATATTCCGAAACGGTCGTCGTTGAGAGCCACAATGATAA
GGTCGAAAGCACGCAGGATGTCCAAGGTTACGCGGATCTCGACCCGGAAG
AACTGAAGGCTCTCGAAACCCGCATCCGATGGAAAACCGATTTGCGCCTC
TGCACCATTGCTGGCACTCTTTGCAGTCTCAATCTGCTTGATTCGGGCAT
CTTGTCATCAGCCTCGGTTACCAGCATGCCCGATGACCTGGATCTTATTG
GCACACGATACTCCGTTTCTGTCTTCATCTTCACCATCGCCAGCGTCGTC
TTCCAGCTGCCGTCGACCATCGCAGTCCGCTGGGTCGGCCCACGCATCTG
GTTTGCATGCATCGCCTTCGCCTTCGGACTGATCACAATGTGCACCGCCT
TTATCCACACCTGGAAGGAGATGATCGCCCTCCGCGTGCTCTTGGGTATG
TCCATGTCGGGGATTTACCCAGGTCTGACCTATCTCATCAGCGCCTGGTA
CCCGCGACGGGAGCAGCAGCTGCGGTTCGCTTTGATGCAGTCAGGCGAAG
TCATCGGTCTTGCGACGGGCTACATCGTGAACTATGGCCTCGAACTGTTG
GATGGGAGAGCTGGCATGCAAGGCTGGCGCTGGATGTACCTCGTGCAGGG
CCTCATCAGCTGCGTCATCGGAATAGCCACTTACTGGTGGATCATCGACT
TCCCAGAGAATGCGCATAGCAGTTTCTGCTTCATGTCCGAACTGGAGGCC
CGCGTCGCCGCTCAACGCATCAAGGCAGACCGTGACGATATCGTTCCGGA
CCCGTTTTCATGGCGCAAGGTTCTCGCACCTTTCGCCGACCCGAAGCTGT
ACGGCTTTGCATGCATGTATTTCCTGCTAAACCTAGTATCAACTGCATTG
AACTATTTCCTTCCAATGATCCTCGAGGACGGCATGGGATTCTCGAGCAA
CGATTCGATTCTCCTATCCACACCGGTAAGCCCCTCACCTTCACATCTTC
TATCTATAGCCCTATACTAACGGCTTAGTAGCCCTACTACTGGGCCGTCA
TCCCAGTCATATTCACCTCCTTCGTCGGAGACAGATACCGCATCCGCGGC
CCACTCATCGCCTTCAACGCCCTCTGCCTCATCGCCGGGTTCCTCATGTT
CGGCCTCCCATCCTCCACCCAAGTCACCGTCCGATACATAGGAACGTTTC
TCGCGACAGGAGCATACGTCTCCAACTGGGCAGCTTTGAATGCCTTTATG
GCCAACAACGTCGTCGGCCAATGGAACCGCGCAACAACGGCGGCGGCAGT
CTCAGCCTGTAACGGCCTGGGCGGCGTTGCGGGTAGCTACATCGTACGAC
AGCAGGAAGCACCGCGCTATGAGACGGCAGTGTGGGTTTCTATCGGGTAA
back to topCoding sequence (CDS) from alignment at An16:1926786..1928185+ >CBS51388_010430-T1 ID=CBS51388_010430-T1|Name=CBS51388_010430-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2688bp|location=Sequence derived from alignment at An16:1926786..1928185+ (Aspergillus niger CBS 513.88)
ATGGATCCCAAATATTCCGAAACGGTCGTCGTTGAGAGCCACAATGATAA
GGTCGAAAGCACGCAGGATGTCCAAGGTTACGCGGATCTCGACCCGGAAG
AACTGAAGGCTCTCGAAACCCGCATCCGATGGAAAACCGATTTGCGCCTC
TGCACCATTGCTGGCACTCTTTGCAGTCTCAATCTGCTTGATTCGGGCAT
CTTGTCATCAGCCTCGGTTACCAGCATGCCCGATGACCTGGATCTTATTG
GCACACGATACTCCGTTTCTGTCTTCATCTTCACCATCGCCAGCGTCGTC
TTCCAGCTGCCGTCGACCATCGCAGTCCGCTGGGTCGGCCCACGCATCTG
GTTTGCATGCATCGCCTTCGCCTTCGGACTGATCACAATGTGCACCGCCT
TTATCCACACCTGGAAGGAGATGATCGCCCTCCGCGTGCTCTTGGGTATG
TCCATGTCGGGGATTTACCCAGGTCTGACCTATCTCATCAGCGCCTGGTA
CCCGCGACGGGAGCAGCAGCTGCGGTTCGCTTTGATGCAGTCAGGCGAAG
TCATCGGTCTTGCGACGGGCTACATCGTGAACTATGGCCTCGAACTGTTG
GATGGGAGAGCTGGCATGCAAGGCTGGCGCTGGATGTACCTCGTGCAGGG
CCTCATCAGCTGCGTCATCGGAATAGCCACTTACTGGTGGATCATCGACT
TCCCAGAGAATGCGCATAGCAGTTTCTGCTTCATGTCCGAACTGGAGGCC
CGCGTCGCCGCTCAACGCATCAAGGCAGACCGTGACGATATCGTTCCGGA
CCCGTTTTCATGGCGCAAGGTTCTCGCACCTTTCGCCGACCCGAAGCTGT
ACGGCTTTGCATGCATGTATTTCCTGCTAAACCTAGTATCAACTGCATTG
AACTATTTCCTTCCAATGATCCTCGAGGACGGCATGGGATTCTCGAGCAA
CGATTCGATTCTCCTATCCACACCGCCCTACTACTGGGCCGTCATCCCAG
TCATATTCACCTCCTTCGTCGGAGACAGATACCGCATCCGCGGCCCACTC
ATCGCCTTCAACGCCCTCTGCCTCATCGCCGGGTTCCTCATGTTCGGCCT
CCCATCCTCCACCCAAGTCACCGTCCGATACATAGGAACGTTTCTCGCGA
CAGGAGCATACGTCTCCAACTGGGCAGCTTTGAATGCCTTTATGGCCAAC
AACGTCGTCGGCCAATGGAACCGCGCAACAACGGCGGCGGCAGTCTCAGC
CTGTAACGGCCTGGGCGGCGTTGCGGGTAGCTACATCGTACGACAGCAGG
AAGCACCGCGCTATGAGACGGCAGTGTGGGTTTCTATCGGGTAAATGGAT
CCCAAATATTCCGAAACGGTCGTCGTTGAGAGCCACAATGATAAGGTCGA
AAGCACGCAGGATGTCCAAGGTTACGCGGATCTCGACCCGGAAGAACTGA
AGGCTCTCGAAACCCGCATCCGATGGAAAACCGATTTGCGCCTCTGCACC
ATTGCTGGCACTCTTTGCAGTCTCAATCTGCTTGATTCGGGCATCTTGTC
ATCAGCCTCGGTTACCAGCATGCCCGATGACCTGGATCTTATTGGCACAC
GATACTCCGTTTCTGTCTTCATCTTCACCATCGCCAGCGTCGTCTTCCAG
CTGCCGTCGACCATCGCAGTCCGCTGGGTCGGCCCACGCATCTGGTTTGC
ATGCATCGCCTTCGCCTTCGGACTGATCACAATGTGCACCGCCTTTATCC
ACACCTGGAAGGAGATGATCGCCCTCCGCGTGCTCTTGGGTATGTCCATG
TCGGGGATTTACCCAGGTCTGACCTATCTCATCAGCGCCTGGTACCCGCG
ACGGGAGCAGCAGCTGCGGTTCGCTTTGATGCAGTCAGGCGAAGTCATCG
GTCTTGCGACGGGCTACATCGTGAACTATGGCCTCGAACTGTTGGATGGG
AGAGCTGGCATGCAAGGCTGGCGCTGGATGTACCTCGTGCAGGGCCTCAT
CAGCTGCGTCATCGGAATAGCCACTTACTGGTGGATCATCGACTTCCCAG
AGAATGCGCATAGCAGTTTCTGCTTCATGTCCGAACTGGAGGCCCGCGTC
GCCGCTCAACGCATCAAGGCAGACCGTGACGATATCGTTCCGGACCCGTT
TTCATGGCGCAAGGTTCTCGCACCTTTCGCCGACCCGAAGCTGTACGGCT
TTGCATGCATGTATTTCCTGCTAAACCTAGTATCAACTGCATTGAACTAT
TTCCTTCCAATGATCCTCGAGGACGGCATGGGATTCTCGAGCAACGATTC
GATTCTCCTATCCACACCGCCCTACTACTGGGCCGTCATCCCAGTCATAT
TCACCTCCTTCGTCGGAGACAGATACCGCATCCGCGGCCCACTCATCGCC
TTCAACGCCCTCTGCCTCATCGCCGGGTTCCTCATGTTCGGCCTCCCATC
CTCCACCCAAGTCACCGTCCGATACATAGGAACGTTTCTCGCGACAGGAG
CATACGTCTCCAACTGGGCAGCTTTGAATGCCTTTATGGCCAACAACGTC
GTCGGCCAATGGAACCGCGCAACAACGGCGGCGGCAGTCTCAGCCTGTAA
CGGCCTGGGCGGCGTTGCGGGTAGCTACATCGTACGACAGCAGGAAGCAC
CGCGCTATGAGACGGCAGTGTGGGTTTCTATCGGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:1926786..1928185 + |
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