|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:1933514..1935693- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010433-T1 ID=CBS51388_010433-T1|Name=CBS51388_010433-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2180bp|location=Sequence derived from alignment at An16:1933514..1935693- (Aspergillus niger CBS 513.88)
ATGTCCTCGGCTATGCAACAGCGCAAGGCCGAGATCCTTGCCAAGAGAGC
CAAACTCGCCGAACTGAAGCGGCAGAGAGAGCTGCGGCAGAAGGAATTCT
CGCAAACCCGAGCTAACACCGGCGATGCTTCTGAGGTAGAGAGACCCTTT
CCCCCTCACTCATGGTCTCCCATGTCGCTTGGAAAAGGGCCAGCGCTCAA
GTCTACTTGTCTTTCTAGGTCGTCTCCCCTGCCCCCAGCCGCGCAGATAG
TCGAGCTGAGCTCGATGATCTTATCTCACGTTTAGTTGACCGCCCGGGGT
CGGCTTCCATCAGCCACGGAGCCGATGGCCTGTCACGGAAAGGAAGTAGG
CCTAACTCGGTGCTGAGTGCTAGCCAGCTCAGTGGCGACAACACGGAAGC
GTTCAGTCCAACTACGCGACCACTCTCACAGTCAATTGCTGTTCAAACGG
TCGGAACGGAGCCGTTTGTCGCGGCTCCTGAGCCGCAGCCCGCCCCTGAG
CCCAAACCCGAAGTTGTCACATACAGTAAAGGAGTCCAGACAGAGGAGTT
GAAACCGTCCGGCACCACAGAGTCAGATGATGAAGAAAACAATGGCAGCA
AAAGAGATAGCGAACGCGACGAAGAGATCCGGAGGAAGCTCCGAAAAGAG
ATCGAGGAGGAGCTGCAGGCCACTCAGCAGCACGCTGACAATGAAGCCAG
CGCCGAGGCCTCAAATATGCGTTACCCGCTCCGTACATTAGATGATGACG
AATTAAAGGCTGTCACGTCCTCCGAGGACTTTCTGGATTTCGTTGAGCGA
TCAGCTAAAGTCATTGAGCGGGCACTGGACGAGGAATACGACGTGCTAGC
AGACTACGAGCTTGGAGGCGTGGATGGTGAACTAGAAGACGACGATGAAC
ATGGACGGAAACGGCGCGGGATTAGGGAGGTCTGCCAGTTCTGGGACGAG
CGATGGAGCAAGAAGCGAATGATCAGTGATCTAAGCTTTTCGCCAAAGGT
TTGTCGCTCTAAGAGCCATCATGAGCTTCGCATTGAGATCTGACACCCCC
CACAGTTCCCCGAACTTGTTCTGGCTGCATACACCAAGAACCCTTCTGCC
CCTCATGAGCCCGATGGTCTCGTCCAGATCTGGAACCAACACCTTCACTC
CCGACCGGAGTATGTCTTTCATTCTACCTCCGACATTTTAGCCGCCAAAT
TCTCTCCATTCCACCCTAATCTCATTGTTGGCGGTTCGTACTCAGGGCAG
GTACTGCTTTGGGATACTCGGTCGTCGCGCGCAGGCGGTGGCGCCCCCGT
CCAGAAGACGCCGTTGACTGGCTCTGGGCATACGCACCCGGTCTACAGTA
TTTCCATCATTGGAACACAGAATGCCCATAACATTTTGACCGCATCAACA
GATGGCGTGGTCTGCGGTTGGACGGTCGACATGCTTTCTCAGCCTCAAGA
ATACCTCGAGCTATCTACCCCCCCGCCCTCGAAAACAGAAGATCTTGCAC
CCACGACGATGTCATTTCCGCAGTCCGACCCCACGTTTTTCATCGTTGGT
ACTGAGGAAGGAGGAATTTACCCATGCCACCGTTACGATAGAGCCGGGGC
CAAGGCTGGTACCGACCATCGCCTTGTGTATCGCGGTCATAAAGCCCCAA
TCATGTCTACTGCATTCCATCCGGCTCGCGGTCCAGTTGATCTGGGCGAT
CTCATGCTTAGCTCTAGTCTGGATTGGAGCGTGAGACTCTGGCGCATCCG
TCCGCCGGCAACGACTGCCCCAGCAACCTCCGCCATAGCCACAACTCAGG
TTGTGGAGCCTATTCTTGACATTAATCGTGAGGACGTCGTGTACGATGCA
CGATGGTCCCCTCACCGCCCCGGTGTCTTCTCTCTCGTCGACGGTGCTGG
AAACCTCGAAGTCTGGGATCTCTACACAGACACCGAAGTCCCCGTCGTGA
AGACGACACCGTCCAAGGGCCGTGGAGGTATATTAACGAGGAGTCTCAAC
AAGGTAGCCTGGGAAGAGCGCGAGGGCAGGCGCATTGCAACGGGTGGGCT
TGATGGTGTCGTTACTGTCTTTGAAGTCGGAAAGGGTCTCAGCGGTACTC
CAGAAGACGTTCCTGCCGATGAATGGGCGGGCATGAAGAAACTCGTTGGT
AAGTTGGAGCAGCAGGACCGGAACAACTGA back to topCoding sequence (CDS) from alignment at An16:1933514..1935693- >CBS51388_010433-T1 ID=CBS51388_010433-T1|Name=CBS51388_010433-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6120bp|location=Sequence derived from alignment at An16:1933514..1935693- (Aspergillus niger CBS 513.88)
TTCCCCGAACTTGTTCTGGCTGCATACACCAAGAACCCTTCTGCCCCTCA
TGAGCCCGATGGTCTCGTCCAGATCTGGAACCAACACCTTCACTCCCGAC
CGGAGTATGTCTTTCATTCTACCTCCGACATTTTAGCCGCCAAATTCTCT
CCATTCCACCCTAATCTCATTGTTGGCGGTTCGTACTCAGGGCAGGTACT
GCTTTGGGATACTCGGTCGTCGCGCGCAGGCGGTGGCGCCCCCGTCCAGA
AGACGCCGTTGACTGGCTCTGGGCATACGCACCCGGTCTACAGTATTTCC
ATCATTGGAACACAGAATGCCCATAACATTTTGACCGCATCAACAGATGG
CGTGGTCTGCGGTTGGACGGTCGACATGCTTTCTCAGCCTCAAGAATACC
TCGAGCTATCTACCCCCCCGCCCTCGAAAACAGAAGATCTTGCACCCACG
ACGATGTCATTTCCGCAGTCCGACCCCACGTTTTTCATCGTTGGTACTGA
GGAAGGAGGAATTTACCCATGCCACCGTTACGATAGAGCCGGGGCCAAGG
CTGGTACCGACCATCGCCTTGTGTATCGCGGTCATAAAGCCCCAATCATG
TCTACTGCATTCCATCCGGCTCGCGGTCCAGTTGATCTGGGCGATCTCAT
GCTTAGCTCTAGTCTGGATTGGAGCGTGAGACTCTGGCGCATCCGTCCGC
CGGCAACGACTGCCCCAGCAACCTCCGCCATAGCCACAACTCAGGTTGTG
GAGCCTATTCTTGACATTAATCGTGAGGACGTCGTGTACGATGCACGATG
GTCCCCTCACCGCCCCGGTGTCTTCTCTCTCGTCGACGGTGCTGGAAACC
TCGAAGTCTGGGATCTCTACACAGACACCGAAGTCCCCGTCGTGAAGACG
ACACCGTCCAAGGGCCGTGGAGGTATATTAACGAGGAGTCTCAACAAGGT
AGCCTGGGAAGAGCGCGAGGGCAGGCGCATTGCAACGGGTGGGCTTGATG
GTGTCGTTACTGTCTTTGAAGTCGGAAAGGGTCTCAGCGGTACTCCAGAA
GACGTTCCTGCCGATGAATGGGCGGGCATGAAGAAACTCGTTGGTAAGTT
GGAGCAGCAGGACCGGAACAACTGAGTCGTCTCCCCTGCCCCCAGCCGCG
CAGATAGTCGAGCTGAGCTCGATGATCTTATCTCACGTTTAGTTGACCGC
CCGGGGTCGGCTTCCATCAGCCACGGAGCCGATGGCCTGTCACGGAAAGG
AAGTAGGCCTAACTCGGTGCTGAGTGCTAGCCAGCTCAGTGGCGACAACA
CGGAAGCGTTCAGTCCAACTACGCGACCACTCTCACAGTCAATTGCTGTT
CAAACGGTCGGAACGGAGCCGTTTGTCGCGGCTCCTGAGCCGCAGCCCGC
CCCTGAGCCCAAACCCGAAGTTGTCACATACAGTAAAGGAGTCCAGACAG
AGGAGTTGAAACCGTCCGGCACCACAGAGTCAGATGATGAAGAAAACAAT
GGCAGCAAAAGAGATAGCGAACGCGACGAAGAGATCCGGAGGAAGCTCCG
AAAAGAGATCGAGGAGGAGCTGCAGGCCACTCAGCAGCACGCTGACAATG
AAGCCAGCGCCGAGGCCTCAAATATGCGTTACCCGCTCCGTACATTAGAT
GATGACGAATTAAAGGCTGTCACGTCCTCCGAGGACTTTCTGGATTTCGT
TGAGCGATCAGCTAAAGTCATTGAGCGGGCACTGGACGAGGAATACGACG
TGCTAGCAGACTACGAGCTTGGAGGCGTGGATGGTGAACTAGAAGACGAC
GATGAACATGGACGGAAACGGCGCGGGATTAGGGAGGTCTGCCAGTTCTG
GGACGAGCGATGGAGCAAGAAGCGAATGATCAGTGATCTAAGCTTTTCGC
CAAAGATGTCCTCGGCTATGCAACAGCGCAAGGCCGAGATCCTTGCCAAG
AGAGCCAAACTCGCCGAACTGAAGCGGCAGAGAGAGCTGCGGCAGAAGGA
ATTCTCGCAAACCCGAGCTAACACCGGCGATGCTTCTGAGTTCCCCGAAC
TTGTTCTGGCTGCATACACCAAGAACCCTTCTGCCCCTCATGAGCCCGAT
GGTCTCGTCCAGATCTGGAACCAACACCTTCACTCCCGACCGGAGTATGT
CTTTCATTCTACCTCCGACATTTTAGCCGCCAAATTCTCTCCATTCCACC
CTAATCTCATTGTTGGCGGTTCGTACTCAGGGCAGGTACTGCTTTGGGAT
ACTCGGTCGTCGCGCGCAGGCGGTGGCGCCCCCGTCCAGAAGACGCCGTT
GACTGGCTCTGGGCATACGCACCCGGTCTACAGTATTTCCATCATTGGAA
CACAGAATGCCCATAACATTTTGACCGCATCAACAGATGGCGTGGTCTGC
GGTTGGACGGTCGACATGCTTTCTCAGCCTCAAGAATACCTCGAGCTATC
TACCCCCCCGCCCTCGAAAACAGAAGATCTTGCACCCACGACGATGTCAT
TTCCGCAGTCCGACCCCACGTTTTTCATCGTTGGTACTGAGGAAGGAGGA
ATTTACCCATGCCACCGTTACGATAGAGCCGGGGCCAAGGCTGGTACCGA
CCATCGCCTTGTGTATCGCGGTCATAAAGCCCCAATCATGTCTACTGCAT
TCCATCCGGCTCGCGGTCCAGTTGATCTGGGCGATCTCATGCTTAGCTCT
AGTCTGGATTGGAGCGTGAGACTCTGGCGCATCCGTCCGCCGGCAACGAC
TGCCCCAGCAACCTCCGCCATAGCCACAACTCAGGTTGTGGAGCCTATTC
TTGACATTAATCGTGAGGACGTCGTGTACGATGCACGATGGTCCCCTCAC
CGCCCCGGTGTCTTCTCTCTCGTCGACGGTGCTGGAAACCTCGAAGTCTG
GGATCTCTACACAGACACCGAAGTCCCCGTCGTGAAGACGACACCGTCCA
AGGGCCGTGGAGGTATATTAACGAGGAGTCTCAACAAGGTAGCCTGGGAA
GAGCGCGAGGGCAGGCGCATTGCAACGGGTGGGCTTGATGGTGTCGTTAC
TGTCTTTGAAGTCGGAAAGGGTCTCAGCGGTACTCCAGAAGACGTTCCTG
CCGATGAATGGGCGGGCATGAAGAAACTCGTTGGTAAGTTGGAGCAGCAG
GACCGGAACAACTGAGTCGTCTCCCCTGCCCCCAGCCGCGCAGATAGTCG
AGCTGAGCTCGATGATCTTATCTCACGTTTAGTTGACCGCCCGGGGTCGG
CTTCCATCAGCCACGGAGCCGATGGCCTGTCACGGAAAGGAAGTAGGCCT
AACTCGGTGCTGAGTGCTAGCCAGCTCAGTGGCGACAACACGGAAGCGTT
CAGTCCAACTACGCGACCACTCTCACAGTCAATTGCTGTTCAAACGGTCG
GAACGGAGCCGTTTGTCGCGGCTCCTGAGCCGCAGCCCGCCCCTGAGCCC
AAACCCGAAGTTGTCACATACAGTAAAGGAGTCCAGACAGAGGAGTTGAA
ACCGTCCGGCACCACAGAGTCAGATGATGAAGAAAACAATGGCAGCAAAA
GAGATAGCGAACGCGACGAAGAGATCCGGAGGAAGCTCCGAAAAGAGATC
GAGGAGGAGCTGCAGGCCACTCAGCAGCACGCTGACAATGAAGCCAGCGC
CGAGGCCTCAAATATGCGTTACCCGCTCCGTACATTAGATGATGACGAAT
TAAAGGCTGTCACGTCCTCCGAGGACTTTCTGGATTTCGTTGAGCGATCA
GCTAAAGTCATTGAGCGGGCACTGGACGAGGAATACGACGTGCTAGCAGA
CTACGAGCTTGGAGGCGTGGATGGTGAACTAGAAGACGACGATGAACATG
GACGGAAACGGCGCGGGATTAGGGAGGTCTGCCAGTTCTGGGACGAGCGA
TGGAGCAAGAAGCGAATGATCAGTGATCTAAGCTTTTCGCCAAAGATGTC
CTCGGCTATGCAACAGCGCAAGGCCGAGATCCTTGCCAAGAGAGCCAAAC
TCGCCGAACTGAAGCGGCAGAGAGAGCTGCGGCAGAAGGAATTCTCGCAA
ACCCGAGCTAACACCGGCGATGCTTCTGAGTTCCCCGAACTTGTTCTGGC
TGCATACACCAAGAACCCTTCTGCCCCTCATGAGCCCGATGGTCTCGTCC
AGATCTGGAACCAACACCTTCACTCCCGACCGGAGTATGTCTTTCATTCT
ACCTCCGACATTTTAGCCGCCAAATTCTCTCCATTCCACCCTAATCTCAT
TGTTGGCGGTTCGTACTCAGGGCAGGTACTGCTTTGGGATACTCGGTCGT
CGCGCGCAGGCGGTGGCGCCCCCGTCCAGAAGACGCCGTTGACTGGCTCT
GGGCATACGCACCCGGTCTACAGTATTTCCATCATTGGAACACAGAATGC
CCATAACATTTTGACCGCATCAACAGATGGCGTGGTCTGCGGTTGGACGG
TCGACATGCTTTCTCAGCCTCAAGAATACCTCGAGCTATCTACCCCCCCG
CCCTCGAAAACAGAAGATCTTGCACCCACGACGATGTCATTTCCGCAGTC
CGACCCCACGTTTTTCATCGTTGGTACTGAGGAAGGAGGAATTTACCCAT
GCCACCGTTACGATAGAGCCGGGGCCAAGGCTGGTACCGACCATCGCCTT
GTGTATCGCGGTCATAAAGCCCCAATCATGTCTACTGCATTCCATCCGGC
TCGCGGTCCAGTTGATCTGGGCGATCTCATGCTTAGCTCTAGTCTGGATT
GGAGCGTGAGACTCTGGCGCATCCGTCCGCCGGCAACGACTGCCCCAGCA
ACCTCCGCCATAGCCACAACTCAGGTTGTGGAGCCTATTCTTGACATTAA
TCGTGAGGACGTCGTGTACGATGCACGATGGTCCCCTCACCGCCCCGGTG
TCTTCTCTCTCGTCGACGGTGCTGGAAACCTCGAAGTCTGGGATCTCTAC
ACAGACACCGAAGTCCCCGTCGTGAAGACGACACCGTCCAAGGGCCGTGG
AGGTATATTAACGAGGAGTCTCAACAAGGTAGCCTGGGAAGAGCGCGAGG
GCAGGCGCATTGCAACGGGTGGGCTTGATGGTGTCGTTACTGTCTTTGAA
GTCGGAAAGGGTCTCAGCGGTACTCCAGAAGACGTTCCTGCCGATGAATG
GGCGGGCATGAAGAAACTCGTTGGTAAGTTGGAGCAGCAGGACCGGAACA
ACTGAGTCGTCTCCCCTGCCCCCAGCCGCGCAGATAGTCGAGCTGAGCTC
GATGATCTTATCTCACGTTTAGTTGACCGCCCGGGGTCGGCTTCCATCAG
CCACGGAGCCGATGGCCTGTCACGGAAAGGAAGTAGGCCTAACTCGGTGC
TGAGTGCTAGCCAGCTCAGTGGCGACAACACGGAAGCGTTCAGTCCAACT
ACGCGACCACTCTCACAGTCAATTGCTGTTCAAACGGTCGGAACGGAGCC
GTTTGTCGCGGCTCCTGAGCCGCAGCCCGCCCCTGAGCCCAAACCCGAAG
TTGTCACATACAGTAAAGGAGTCCAGACAGAGGAGTTGAAACCGTCCGGC
ACCACAGAGTCAGATGATGAAGAAAACAATGGCAGCAAAAGAGATAGCGA
ACGCGACGAAGAGATCCGGAGGAAGCTCCGAAAAGAGATCGAGGAGGAGC
TGCAGGCCACTCAGCAGCACGCTGACAATGAAGCCAGCGCCGAGGCCTCA
AATATGCGTTACCCGCTCCGTACATTAGATGATGACGAATTAAAGGCTGT
CACGTCCTCCGAGGACTTTCTGGATTTCGTTGAGCGATCAGCTAAAGTCA
TTGAGCGGGCACTGGACGAGGAATACGACGTGCTAGCAGACTACGAGCTT
GGAGGCGTGGATGGTGAACTAGAAGACGACGATGAACATGGACGGAAACG
GCGCGGGATTAGGGAGGTCTGCCAGTTCTGGGACGAGCGATGGAGCAAGA
AGCGAATGATCAGTGATCTAAGCTTTTCGCCAAAGATGTCCTCGGCTATG
CAACAGCGCAAGGCCGAGATCCTTGCCAAGAGAGCCAAACTCGCCGAACT
GAAGCGGCAGAGAGAGCTGCGGCAGAAGGAATTCTCGCAAACCCGAGCTA
ACACCGGCGATGCTTCTGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:1933514..1935693 - |
|
