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Sequences
The following sequences are available for this feature:
mRNA from alignment at An17:75983..77455+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010517-T1 ID=CBS51388_010517-T1|Name=CBS51388_010517-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1473bp|location=Sequence derived from alignment at An17:75983..77455+ (Aspergillus niger CBS 513.88)
ATGTCTACTGCCGTCGAGAACACTACCGACAACGTCGCCTCTGCTCCCGC
CACTACCGCCCCCGAGGCTACTACCAACGGCACTGCTCCCGCCCCTGCGC
AGTCCACGGACGCTGCCGCTGCCAGTGCCGATGAAGGACGTCGGTTGTAC
ATTGGGAACCTCGCTTATGCGACCACTGAGGGGGAGCTGAAGGAGTTTTT
CAAGAACTACAAGATGTAAGTTGCTTGACCTTGCTTTGCTTTGTTGTTGT
TCCACCTGGCCTTTCGCCTCCCGGTTGGTCTAAGCTCCGTTGGGCTGGTC
CTAGCGGTTCGGGGGGCCGGCGAGAGCCACGTTTCCTACACCCCCTTGCT
GCCATCGGAGGTAGTACCGCGCAGCGGTGGTATGTGGCCACCACTGCAGG
GACGCCAATTGTTCAGAGCTCCATTTCTGAACCCCTTCTTTGTCAAACAT
TCTTATGCGGGAAGTTACACCGATCTAACAATGGCTCTTTCACAGTGAGA
GCGTCTCCATCCCCGTGAACCCTCGCACCAACCGTCCCGTTGGCTACGCC
TTCGTGGACCTCGCCACTGCTCAGGAGGCCACCGCTGCTATTGAGGAGCT
GTCTGGAAAGGAGATCCTCCAGCGTAAGGTCTCTGTGCAGCTTGCCCGCA
AGCCCGAGCCTGCTGAGGCCAAGGCCGAGGGTGCTACAAGTGGCGGTGAG
GGTGCCAGCGGTAACGAGGGCCGCAAGAGGGCTGGTGGCCGTGGCCGTGG
CCGCGGCCGCGGTCGTGGTCGTGGAGGCCGTCTGCCCCGTGCTGGTCGCT
CTGTAAGTGGCTCGTCATTCATGCTCCATCCAATCGGATACTAATCTACC
ATGTAGCAGGCCCCAGTTCAGAACGGTCAGGAGGCTGCTGAGCCCACCAA
CGTTCCCGCTCAGGCTGCTCCCCTGACTGAGGTCACCAACCAGAACGAGA
CGGCTGCTGCCACCGAGTCCAAGCAGGCTGGCAAGCCCCGTGCTCCTCGT
CCCCAGAAGCAGCGCGGTCCTCCCGAGGATGGCATTCCTTCCAAGACCAA
GGTCATGGTCGCTAACCTTCCTTATGACCTGACCGAAGACAAGGTACGGA
TGATGATTTCAGAGTTTAGAGTAACATACTAATTCCCTCTCAGCTCAAGG
AGATCTTTGTCGACTACCAGCCCGTCTCCGCCAAGATTGCTCTCCGCCCC
ATTCCCCGTTTCATGATCAAGAAGCTCCAGGCTCGCAACGAGCGCCGCAA
GGGCCGTGGTTTCGGTTTCGTCACCCTTGGCTCCGAGGAGCTCCAGAACA
AGGCTGTTGTGGAGATGAACGGCAAGGAGATCGAGGGCCGTGAAATCGCC
GTCAAGGTCGCCATCGACAGCCCCGGCAAGGAGGACGACGCCATCGCCCC
TGCTGAGACTGAGACCACCGAGCAGGCGACTGAGGCTCCGGCACAGGAGA
ACGCTGCTCCCGCCGCTGCTTAA back to topCoding sequence (CDS) from alignment at An17:75983..77455+ >CBS51388_010517-T1 ID=CBS51388_010517-T1|Name=CBS51388_010517-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4344bp|location=Sequence derived from alignment at An17:75983..77455+ (Aspergillus niger CBS 513.88)
ATGTCTACTGCCGTCGAGAACACTACCGACAACGTCGCCTCTGCTCCCGC
CACTACCGCCCCCGAGGCTACTACCAACGGCACTGCTCCCGCCCCTGCGC
AGTCCACGGACGCTGCCGCTGCCAGTGCCGATGAAGGACGTCGGTTGTAC
ATTGGGAACCTCGCTTATGCGACCACTGAGGGGGAGCTGAAGGAGTTTTT
CAAGAACTACAAGATTGAGAGCGTCTCCATCCCCGTGAACCCTCGCACCA
ACCGTCCCGTTGGCTACGCCTTCGTGGACCTCGCCACTGCTCAGGAGGCC
ACCGCTGCTATTGAGGAGCTGTCTGGAAAGGAGATCCTCCAGCGTAAGGT
CTCTGTGCAGCTTGCCCGCAAGCCCGAGCCTGCTGAGGCCAAGGCCGAGG
GTGCTACAAGTGGCGGTGAGGGTGCCAGCGGTAACGAGGGCCGCAAGAGG
GCTGGTGGCCGTGGCCGTGGCCGCGGCCGCGGTCGTGGTCGTGGAGGCCG
TCTGCCCCGTGCTGGTCGCTCTGCCCCAGTTCAGAACGGTCAGGAGGCTG
CTGAGCCCACCAACGTTCCCGCTCAGGCTGCTCCCCTGACTGAGGTCACC
AACCAGAACGAGACGGCTGCTGCCACCGAGTCCAAGCAGGCTGGCAAGCC
CCGTGCTCCTCGTCCCCAGAAGCAGCGCGGTCCTCCCGAGGATGGCATTC
CTTCCAAGACCAAGGTCATGGTCGCTAACCTTCCTTATGACCTGACCGAA
GACAAGCTCAAGGAGATCTTTGTCGACTACCAGCCCGTCTCCGCCAAGAT
TGCTCTCCGCCCCATTCCCCGTTTCATGATCAAGAAGCTCCAGGCTCGCA
ACGAGCGCCGCAAGGGCCGTGGTTTCGGTTTCGTCACCCTTGGCTCCGAG
GAGCTCCAGAACAAGGCTGTTGTGGAGATGAACGGCAAGGAGATCGAGGG
CCGTGAAATCGCCGTCAAGGTCGCCATCGACAGCCCCGGCAAGGAGGACG
ACGCCATCGCCCCTGCTGAGACTGAGACCACCGAGCAGGCGACTGAGGCT
CCGGCACAGGAGAACGCTGCTCCCGCCGCTGCTTAAATGTCTACTGCCGT
CGAGAACACTACCGACAACGTCGCCTCTGCTCCCGCCACTACCGCCCCCG
AGGCTACTACCAACGGCACTGCTCCCGCCCCTGCGCAGTCCACGGACGCT
GCCGCTGCCAGTGCCGATGAAGGACGTCGGTTGTACATTGGGAACCTCGC
TTATGCGACCACTGAGGGGGAGCTGAAGGAGTTTTTCAAGAACTACAAGA
TTGAGAGCGTCTCCATCCCCGTGAACCCTCGCACCAACCGTCCCGTTGGC
TACGCCTTCGTGGACCTCGCCACTGCTCAGGAGGCCACCGCTGCTATTGA
GGAGCTGTCTGGAAAGGAGATCCTCCAGCGTAAGGTCTCTGTGCAGCTTG
CCCGCAAGCCCGAGCCTGCTGAGGCCAAGGCCGAGGGTGCTACAAGTGGC
GGTGAGGGTGCCAGCGGTAACGAGGGCCGCAAGAGGGCTGGTGGCCGTGG
CCGTGGCCGCGGCCGCGGTCGTGGTCGTGGAGGCCGTCTGCCCCGTGCTG
GTCGCTCTGCCCCAGTTCAGAACGGTCAGGAGGCTGCTGAGCCCACCAAC
GTTCCCGCTCAGGCTGCTCCCCTGACTGAGGTCACCAACCAGAACGAGAC
GGCTGCTGCCACCGAGTCCAAGCAGGCTGGCAAGCCCCGTGCTCCTCGTC
CCCAGAAGCAGCGCGGTCCTCCCGAGGATGGCATTCCTTCCAAGACCAAG
GTCATGGTCGCTAACCTTCCTTATGACCTGACCGAAGACAAGCTCAAGGA
GATCTTTGTCGACTACCAGCCCGTCTCCGCCAAGATTGCTCTCCGCCCCA
TTCCCCGTTTCATGATCAAGAAGCTCCAGGCTCGCAACGAGCGCCGCAAG
GGCCGTGGTTTCGGTTTCGTCACCCTTGGCTCCGAGGAGCTCCAGAACAA
GGCTGTTGTGGAGATGAACGGCAAGGAGATCGAGGGCCGTGAAATCGCCG
TCAAGGTCGCCATCGACAGCCCCGGCAAGGAGGACGACGCCATCGCCCCT
GCTGAGACTGAGACCACCGAGCAGGCGACTGAGGCTCCGGCACAGGAGAA
CGCTGCTCCCGCCGCTGCTTAAATGTCTACTGCCGTCGAGAACACTACCG
ACAACGTCGCCTCTGCTCCCGCCACTACCGCCCCCGAGGCTACTACCAAC
GGCACTGCTCCCGCCCCTGCGCAGTCCACGGACGCTGCCGCTGCCAGTGC
CGATGAAGGACGTCGGTTGTACATTGGGAACCTCGCTTATGCGACCACTG
AGGGGGAGCTGAAGGAGTTTTTCAAGAACTACAAGATTGAGAGCGTCTCC
ATCCCCGTGAACCCTCGCACCAACCGTCCCGTTGGCTACGCCTTCGTGGA
CCTCGCCACTGCTCAGGAGGCCACCGCTGCTATTGAGGAGCTGTCTGGAA
AGGAGATCCTCCAGCGTAAGGTCTCTGTGCAGCTTGCCCGCAAGCCCGAG
CCTGCTGAGGCCAAGGCCGAGGGTGCTACAAGTGGCGGTGAGGGTGCCAG
CGGTAACGAGGGCCGCAAGAGGGCTGGTGGCCGTGGCCGTGGCCGCGGCC
GCGGTCGTGGTCGTGGAGGCCGTCTGCCCCGTGCTGGTCGCTCTGCCCCA
GTTCAGAACGGTCAGGAGGCTGCTGAGCCCACCAACGTTCCCGCTCAGGC
TGCTCCCCTGACTGAGGTCACCAACCAGAACGAGACGGCTGCTGCCACCG
AGTCCAAGCAGGCTGGCAAGCCCCGTGCTCCTCGTCCCCAGAAGCAGCGC
GGTCCTCCCGAGGATGGCATTCCTTCCAAGACCAAGGTCATGGTCGCTAA
CCTTCCTTATGACCTGACCGAAGACAAGCTCAAGGAGATCTTTGTCGACT
ACCAGCCCGTCTCCGCCAAGATTGCTCTCCGCCCCATTCCCCGTTTCATG
ATCAAGAAGCTCCAGGCTCGCAACGAGCGCCGCAAGGGCCGTGGTTTCGG
TTTCGTCACCCTTGGCTCCGAGGAGCTCCAGAACAAGGCTGTTGTGGAGA
TGAACGGCAAGGAGATCGAGGGCCGTGAAATCGCCGTCAAGGTCGCCATC
GACAGCCCCGGCAAGGAGGACGACGCCATCGCCCCTGCTGAGACTGAGAC
CACCGAGCAGGCGACTGAGGCTCCGGCACAGGAGAACGCTGCTCCCGCCG
CTGCTTAAATGTCTACTGCCGTCGAGAACACTACCGACAACGTCGCCTCT
GCTCCCGCCACTACCGCCCCCGAGGCTACTACCAACGGCACTGCTCCCGC
CCCTGCGCAGTCCACGGACGCTGCCGCTGCCAGTGCCGATGAAGGACGTC
GGTTGTACATTGGGAACCTCGCTTATGCGACCACTGAGGGGGAGCTGAAG
GAGTTTTTCAAGAACTACAAGATTGAGAGCGTCTCCATCCCCGTGAACCC
TCGCACCAACCGTCCCGTTGGCTACGCCTTCGTGGACCTCGCCACTGCTC
AGGAGGCCACCGCTGCTATTGAGGAGCTGTCTGGAAAGGAGATCCTCCAG
CGTAAGGTCTCTGTGCAGCTTGCCCGCAAGCCCGAGCCTGCTGAGGCCAA
GGCCGAGGGTGCTACAAGTGGCGGTGAGGGTGCCAGCGGTAACGAGGGCC
GCAAGAGGGCTGGTGGCCGTGGCCGTGGCCGCGGCCGCGGTCGTGGTCGT
GGAGGCCGTCTGCCCCGTGCTGGTCGCTCTGCCCCAGTTCAGAACGGTCA
GGAGGCTGCTGAGCCCACCAACGTTCCCGCTCAGGCTGCTCCCCTGACTG
AGGTCACCAACCAGAACGAGACGGCTGCTGCCACCGAGTCCAAGCAGGCT
GGCAAGCCCCGTGCTCCTCGTCCCCAGAAGCAGCGCGGTCCTCCCGAGGA
TGGCATTCCTTCCAAGACCAAGGTCATGGTCGCTAACCTTCCTTATGACC
TGACCGAAGACAAGCTCAAGGAGATCTTTGTCGACTACCAGCCCGTCTCC
GCCAAGATTGCTCTCCGCCCCATTCCCCGTTTCATGATCAAGAAGCTCCA
GGCTCGCAACGAGCGCCGCAAGGGCCGTGGTTTCGGTTTCGTCACCCTTG
GCTCCGAGGAGCTCCAGAACAAGGCTGTTGTGGAGATGAACGGCAAGGAG
ATCGAGGGCCGTGAAATCGCCGTCAAGGTCGCCATCGACAGCCCCGGCAA
GGAGGACGACGCCATCGCCCCTGCTGAGACTGAGACCACCGAGCAGGCGA
CTGAGGCTCCGGCACAGGAGAACGCTGCTCCCGCCGCTGCTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An17 | supercontig | An17:75983..77455 + |
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