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CBS51388_010530-T1, CBS51388_010530-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010530-T1
Unique NameCBS51388_010530-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An17:125539..127415-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010530-T1 ID=CBS51388_010530-T1|Name=CBS51388_010530-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1877bp|location=Sequence derived from alignment at An17:125539..127415- (Aspergillus niger CBS 513.88)
ATGGACTATTCCGCCATATCAAACGATCCTGATCATCCTGCGGGCACTTC
TCCATGGGCTTCACCTCGCCCGACCCAAACAACCTTTCCGGCTTCCGTGA
CTAGCGACATCCCCCCTGCCCCCTTGCCTCCCCAAGATCCTTACAATGCC
GAATCGCAGCCTACCGAAACTCCTGGGTTCCAGGAGAACGAGATTGGATC
GCCCGACTTGTCTGCGCGACTGCAGGGTGCACAACTGGGTGAGCCGGGCT
ATGTTGATGAGCACTCGCAACACACTCAGCAGCAGCATGGACAACAGCCT
CGCTCTCAGCTCCCCGCCCGCTACCAAACGGGCCCAAGACAGAATCCCAG
ACAACCCGCACCTGTGTATAGAATCCAGGCGAAAGTCACGGGGCTAGAGA
GAACGGGCAAGAAGGACCCTATTCTTCGATTTGATGTTCACGTGAGCGAT
ATCCTTTTCTTGCCTCGCCCTGCGCCTACTGATTACAGGCTCCAGACGAA
TATCCCCAAGTTTAGGACAACACAGTATCGAGACGTTCGTCGTACCCATG
CCGAGTTTGTCAAGCTTGCGGACCATCTGATTTCGGCTAACCCGGAAGCG
TTGGTTCCTGCGGTCCCCCCACCACTTACCCCTGCCGGCGCTGGAACCGA
AGAGGATGAAATCAGAGTCAAGTCGTCTTTGCAACGGTGGTTGAATGTTG
TATTGAGCAATGAAGTTCTCATCCATGACGATGAGGTGGTCCTGTTCGTT
GAGAGTGATTTCGGTTACAGTCCTGTAGTTCGGATGAAACAACCTGCGAC
TGGGGTTCGAAGGAAGGTCTTGAAGCAGTTCGCGCCACCCCCCGATGACA
CACCCGAATTACAAAATGCGCGTCCGATTGTAAAGATGTTCTATCTTGGA
ACAATGGATACTAGTCACAAGGTTGACCGTGTCGTCAAAGCCCGTCGAGG
TATGCGCCAGGGATTCGTATCTCATGATCATGGGAACTAACATTGGGCTA
TCCAGGACTCGGTCTCGCAGAATCCGACTTTGGTGTTAAGTTAGGCCAGA
TGCACGTGCAAGAGACGCACCCTGGACTGTCAAATGCATACCGGAAATTG
GGAAAGATCATCCAAACGGTCGGGGATTTCCATGCCGTCCAGGCGACTGC
GGAGGCCACAACACTGGGGGATCCGCTAAGCTACCACTCGTCCGATGCCT
TTATTGTCAAGGAGACTCTTACAAATCGCCACATCCTCCTTCGTGATTTG
ATCCAAGCTCAACAGGCAACAAGGAGCAAACGCGCCGCCGCTGATCGCCT
CAAAGTCAGTTCCTCCGTCCGCCCGGACAAGGTGGACGAGGCCATCAATG
CCCTGGATGAGGCTCAGGGCCACGAGGACTACCTGACGAAGCGAACACAG
CGGGTTACGTCGAACTTACTCGCCGAGAAGCAACGTTGGTTTGACCGGAC
GACTAACGACATGCTGGCCAGCCTCCGCGAGTATACGCTGCGCCAGATTG
AATCCGAACGGAGGACCCTCGCTACCTTGGAGAGTGTGCGACCTGATATT
CGAGCCATTGACGCTTCGGGAGGACTCAGCCGTCTAGGACGTGAATCCCA
CCCAACCGCTCGCCGACCTAACCTTGGTTCAAGTCAAGGCCCCAAGGGGG
ATGCTTGGAGCGGCATACCGCGTCGCAGCGACAGCCTTGGCCGGAGTCTC
AGTGGCAGTTTCGTTGCACCCACCCCAACTGAAGACGACGAAGAAGTCAA
CGGACACGGCACCGGTAAAGGGCGCCTGCGCTCTGCCAGTGGTGTGAGCT
CGATTGTGGAGGAAGACGACGATGATCGCCTTGACGCTCGTAACGCGGCT
AGTCGCCTGGCCACGAGCACTTTCTAA
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Coding sequence (CDS) from alignment at An17:125539..127415-

>CBS51388_010530-T1 ID=CBS51388_010530-T1|Name=CBS51388_010530-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3642bp|location=Sequence derived from alignment at An17:125539..127415- (Aspergillus niger CBS 513.88)
GACTCGGTCTCGCAGAATCCGACTTTGGTGTTAAGTTAGGCCAGATGCAC
GTGCAAGAGACGCACCCTGGACTGTCAAATGCATACCGGAAATTGGGAAA
GATCATCCAAACGGTCGGGGATTTCCATGCCGTCCAGGCGACTGCGGAGG
CCACAACACTGGGGGATCCGCTAAGCTACCACTCGTCCGATGCCTTTATT
GTCAAGGAGACTCTTACAAATCGCCACATCCTCCTTCGTGATTTGATCCA
AGCTCAACAGGCAACAAGGAGCAAACGCGCCGCCGCTGATCGCCTCAAAG
TCAGTTCCTCCGTCCGCCCGGACAAGGTGGACGAGGCCATCAATGCCCTG
GATGAGGCTCAGGGCCACGAGGACTACCTGACGAAGCGAACACAGCGGGT
TACGTCGAACTTACTCGCCGAGAAGCAACGTTGGTTTGACCGGACGACTA
ACGACATGCTGGCCAGCCTCCGCGAGTATACGCTGCGCCAGATTGAATCC
GAACGGAGGACCCTCGCTACCTTGGAGAGTGTGCGACCTGATATTCGAGC
CATTGACGCTTCGGGAGGACTCAGCCGTCTAGGACGTGAATCCCACCCAA
CCGCTCGCCGACCTAACCTTGGTTCAAGTCAAGGCCCCAAGGGGGATGCT
TGGAGCGGCATACCGCGTCGCAGCGACAGCCTTGGCCGGAGTCTCAGTGG
CAGTTTCGTTGCACCCACCCCAACTGAAGACGACGAAGAAGTCAACGGAC
ACGGCACCGGTAAAGGGCGCCTGCGCTCTGCCAGTGGTGTGAGCTCGATT
GTGGAGGAAGACGACGATGATCGCCTTGACGCTCGTAACGCGGCTAGTCG
CCTGGCCACGAGCACTTTCTAAATGGACTATTCCGCCATATCAAACGATC
CTGATCATCCTGCGGGCACTTCTCCATGGGCTTCACCTCGCCCGACCCAA
ACAACCTTTCCGGCTTCCGTGACTAGCGACATCCCCCCTGCCCCCTTGCC
TCCCCAAGATCCTTACAATGCCGAATCGCAGCCTACCGAAACTCCTGGGT
TCCAGGAGAACGAGATTGGATCGCCCGACTTGTCTGCGCGACTGCAGGGT
GCACAACTGGGTGAGCCGGGCTATGTTGATGAGCACTCGCAACACACTCA
GCAGCAGCATGGACAACAGCCTCGCTCTCAGCTCCCCGCCCGCTACCAAA
CGGGCCCAAGACAGAATCCCAGACAACCCGCACCTGTGTATAGAATCCAG
GCGAAAGTCACGGGGCTAGAGAGAACGGGCAAGAAGGACCCTATTCTTCG
ATTTGATGTTCACGTGAGCGATATCCTTTTCTTGCCTCGCCCTGCGCCTA
CTGATTACAGGCTCCAGACGAATATCCCCAAGTTTAGGACAACACAGTAT
CGAGACGTTCGTCGTACCCATGCCGAGTTTGTCAAGCTTGCGGACCATCT
GATTTCGGCTAACCCGGAAGCGTTGGTTCCTGCGGTCCCCCCACCACTTA
CCCCTGCCGGCGCTGGAACCGAAGAGGATGAAATCAGAGTCAAGTCGTCT
TTGCAACGGTGGTTGAATGTTGTATTGAGCAATGAAGTTCTCATCCATGA
CGATGAGGTGGTCCTGTTCGTTGAGAGTGATTTCGGTTACAGTCCTGTAG
TTCGGATGAAACAACCTGCGACTGGGGTTCGAAGGAAGGTCTTGAAGCAG
TTCGCGCCACCCCCCGATGACACACCCGAATTACAAAATGCGCGTCCGAT
TGTAAAGATGTTCTATCTTGGAACAATGGATACTAGTCACAAGGTTGACC
GTGTCGTCAAAGCCCGTCGAGGACTCGGTCTCGCAGAATCCGACTTTGGT
GTTAAGTTAGGCCAGATGCACGTGCAAGAGACGCACCCTGGACTGTCAAA
TGCATACCGGAAATTGGGAAAGATCATCCAAACGGTCGGGGATTTCCATG
CCGTCCAGGCGACTGCGGAGGCCACAACACTGGGGGATCCGCTAAGCTAC
CACTCGTCCGATGCCTTTATTGTCAAGGAGACTCTTACAAATCGCCACAT
CCTCCTTCGTGATTTGATCCAAGCTCAACAGGCAACAAGGAGCAAACGCG
CCGCCGCTGATCGCCTCAAAGTCAGTTCCTCCGTCCGCCCGGACAAGGTG
GACGAGGCCATCAATGCCCTGGATGAGGCTCAGGGCCACGAGGACTACCT
GACGAAGCGAACACAGCGGGTTACGTCGAACTTACTCGCCGAGAAGCAAC
GTTGGTTTGACCGGACGACTAACGACATGCTGGCCAGCCTCCGCGAGTAT
ACGCTGCGCCAGATTGAATCCGAACGGAGGACCCTCGCTACCTTGGAGAG
TGTGCGACCTGATATTCGAGCCATTGACGCTTCGGGAGGACTCAGCCGTC
TAGGACGTGAATCCCACCCAACCGCTCGCCGACCTAACCTTGGTTCAAGT
CAAGGCCCCAAGGGGGATGCTTGGAGCGGCATACCGCGTCGCAGCGACAG
CCTTGGCCGGAGTCTCAGTGGCAGTTTCGTTGCACCCACCCCAACTGAAG
ACGACGAAGAAGTCAACGGACACGGCACCGGTAAAGGGCGCCTGCGCTCT
GCCAGTGGTGTGAGCTCGATTGTGGAGGAAGACGACGATGATCGCCTTGA
CGCTCGTAACGCGGCTAGTCGCCTGGCCACGAGCACTTTCTAAATGGACT
ATTCCGCCATATCAAACGATCCTGATCATCCTGCGGGCACTTCTCCATGG
GCTTCACCTCGCCCGACCCAAACAACCTTTCCGGCTTCCGTGACTAGCGA
CATCCCCCCTGCCCCCTTGCCTCCCCAAGATCCTTACAATGCCGAATCGC
AGCCTACCGAAACTCCTGGGTTCCAGGAGAACGAGATTGGATCGCCCGAC
TTGTCTGCGCGACTGCAGGGTGCACAACTGGGTGAGCCGGGCTATGTTGA
TGAGCACTCGCAACACACTCAGCAGCAGCATGGACAACAGCCTCGCTCTC
AGCTCCCCGCCCGCTACCAAACGGGCCCAAGACAGAATCCCAGACAACCC
GCACCTGTGTATAGAATCCAGGCGAAAGTCACGGGGCTAGAGAGAACGGG
CAAGAAGGACCCTATTCTTCGATTTGATGTTCACGTGAGCGATATCCTTT
TCTTGCCTCGCCCTGCGCCTACTGATTACAGGCTCCAGACGAATATCCCC
AAGTTTAGGACAACACAGTATCGAGACGTTCGTCGTACCCATGCCGAGTT
TGTCAAGCTTGCGGACCATCTGATTTCGGCTAACCCGGAAGCGTTGGTTC
CTGCGGTCCCCCCACCACTTACCCCTGCCGGCGCTGGAACCGAAGAGGAT
GAAATCAGAGTCAAGTCGTCTTTGCAACGGTGGTTGAATGTTGTATTGAG
CAATGAAGTTCTCATCCATGACGATGAGGTGGTCCTGTTCGTTGAGAGTG
ATTTCGGTTACAGTCCTGTAGTTCGGATGAAACAACCTGCGACTGGGGTT
CGAAGGAAGGTCTTGAAGCAGTTCGCGCCACCCCCCGATGACACACCCGA
ATTACAAAATGCGCGTCCGATTGTAAAGATGTTCTATCTTGGAACAATGG
ATACTAGTCACAAGGTTGACCGTGTCGTCAAAGCCCGTCGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030904retromer complex
Vocabulary: Biological Process
TermDefinition
GO:0015031protein transport
GO:0042147retrograde transport, endosome to Golgi
Vocabulary: Molecular Function
TermDefinition
GO:0035091phosphatidylinositol binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010530CBS51388_010530Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010530-T1CBS51388_010530-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010530-T1.cdsCBS51388_010530-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010530-T1.exon2CBS51388_010530-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010530-T1.exon1CBS51388_010530-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09261IEH
DBxrefInterPro:IPR037907
DBxrefInterPro:IPR014461
DBxrefInterPro:IPR015404
DBxrefInterPro:IPR001683
DBxrefInterPro:IPR036871
DBxrefInterPro:IPR027267
DBxrefPFAM:PF09325
DBxrefPFAM:PF00787
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An17supercontigAn17:125539..127415 -
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