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Sequences
The following sequences are available for this feature:
mRNA from alignment at An17:153116..155273+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010541-T1 ID=CBS51388_010541-T1|Name=CBS51388_010541-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2158bp|location=Sequence derived from alignment at An17:153116..155273+ (Aspergillus niger CBS 513.88)
ATGGATCAGTCCCCCACCGATCAGTCCCCCACCGAGTATGATCTCGCCCC
GGCCCCATACGGCCGCGCCTGCATGAATTGCTCGCAGTCTAAATGCAAAT
GCATCCTGCCCAAAGGGGGCGGGCGATGCCAGAGGTCTGTTTTACGTATA
GTGAGACCAGTGTGAGACCAGTGTGAACTGAATCTGACGGTAATGGGTGA
TGGCAGGTGTCAGCGCCTGAACAAAGAATGTCGGCCATCGGCGTTCCATC
GACGGCAGAATGCACGCAAGCCCTCGAAGACAGGGAGATTGGAGAAGAAG
CTGGATGATTTGGTGACACTGCTTCGCGCGCAAGCGCCTTCCCATGCCCA
TGCGGGGGATTACGCAGAGTTGATTGATGATCTGCGACGAGAGCCAGATG
AAGACCTCCATCACCATCCACCACCACCACGCTCGCAGATCAAGGTTACT
CGGACAGTCTCGACGGCGGAGAAATCCATCGACTGTGAGTTCCTTAATCA
CTTTGCGCAGGTCGGAGCGAATACCTCCTCCCGGGATGAGTCGAACGCGA
GTGCAGCAGAGCCGAGCTGGTCGCAGGCTGAAGAGTATCTGAGCATGTTT
GTCACTCAAAAGCTACCATATTTGCCATTCGTGTATTTCCCGCCAGGAAC
AACAGCACAGCACCTTCGCAGTGACCGTCCGTTCCTCTGGCTATGCGTTA
TGGCAGTTACGGCAAAGAGCCCGAGTCAGCGACGCACGCTGTGCGATAGA
ATCCGCGATACTGTAGCCCAACGCATGGTTTTAGACTGCTACGGTCGCGA
TCTCGACTTCCTCCTCGGTCTCATGGTATACATTGCCTGGTACGATCACC
CTTCCCCCTTGGTAAGACATACTAACAGCCACAGGTCCAACCAGCAAATC
TTCAAGAGGCTCAACATGACCATATACAGCCAGTTCGCCACAGCCGTAGT
CTTCGACCTTATGCTCAACCAGGCCCCTGGCGGAGACAAACCATCACTAC
TGACTATACTCCAAACCCACCCAGACGAGGATCCCTCCCCGCCACGAGCC
CGAACAATGGATGAGAGACGCGCCGTTCTGGGCTGTTTTCTCTTAACCTC
CAGGTACTCCATCCACCTCCCATCCCATCTACCAAGTATAATCCCACTCC
TAACCCAATCCCAGTATATCCCTCTTCCTAGAAAAGAGCGAACCCCTTCG
CTGGACTCCCCACATGGACGAATGCCTACATCACATAAGTGAACACCCCG
AATGCCTCAACGACGAGATTCTCGCCCAGCAAGTGCGCTTCCAACTCATC
AACGAGAGAATCAACACCACCGCCACAACCACAACCGACTTCTACCACAC
CAGCCTCCTATCCCCCTCCCCATTCAGACCCCCACTATCAATCTACACCC
ACGCGATAGACACCCACCTCCAACAAACCCAAAGCAAACTCACCCCCCAC
TCCCAACGCTACCGAATCCTCCAGCTCCACCACTCCAACACGCACCTCAC
GATCCACGAATCCGCCCTTCTAAAACCATTCCCTAACCCCTCTACCACAC
AACCCCCCAATCCTCCCTTAACAATCAATCATCATCTTCACCACCTCGAA
TCCCTCCACGCCTGCCTCTCCGCCGTGAATGCCTGGATAACCTCCTTCCT
CGCCATCCCACCAGCCGAGTACGCAGGCTTCCCCTTCCCCATTTTCTCGC
AGCTCGTGCGACACCTGGCGGCGTTGTATCGGTTGTCTACACTTGATGAT
CCGAGCTGGGATCGAGGGTTTGTGCGCCGCACCGTCGATCTGATGAGTGT
GATGGATCGGTTGATTGGAAACCTGGGACAGGCGGCGGCGTTGGCGAGAC
TCGAGGCGCAGGGCGAGGATGAGGATGAAGATGTGTTTTTTTATTCGATT
GGGAAGTACGAGTCTGTTAGGTTGAAGTGGGGAGGTGTTTTTGGGGGCAG
TGCCCCTGGGAATGGGAATGGGAATGGGGTCAATGGGGGAGTGGTGGAGG
GACAGGGGGTGCAGGATGGGGTTGGGGGAAGTAATGGGTTGGGTCTGGGT
CTGGGTCAAGCTCAGGGACATGCACAGGCACAGGCACAGGAGATGGGGGG
TTGGGGGGCGGGTTATGATGATTGGTTGTCGGAGTTTTTGAATTCGATGG
TGCATTGA back to topCoding sequence (CDS) from alignment at An17:153116..155273+ >CBS51388_010541-T1 ID=CBS51388_010541-T1|Name=CBS51388_010541-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7920bp|location=Sequence derived from alignment at An17:153116..155273+ (Aspergillus niger CBS 513.88)
ATGGATCAGTCCCCCACCGATCAGTCCCCCACCGAGTATGATCTCGCCCC
GGCCCCATACGGCCGCGCCTGCATGAATTGCTCGCAGTCTAAATGCAAAT
GCATCCTGCCCAAAGGGGGCGGGCGATGCCAGAGGTGTCAGCGCCTGAAC
AAAGAATGTCGGCCATCGGCGTTCCATCGACGGCAGAATGCACGCAAGCC
CTCGAAGACAGGGAGATTGGAGAAGAAGCTGGATGATTTGGTGACACTGC
TTCGCGCGCAAGCGCCTTCCCATGCCCATGCGGGGGATTACGCAGAGTTG
ATTGATGATCTGCGACGAGAGCCAGATGAAGACCTCCATCACCATCCACC
ACCACCACGCTCGCAGATCAAGGTTACTCGGACAGTCTCGACGGCGGAGA
AATCCATCGACTGTGAGTTCCTTAATCACTTTGCGCAGGTCGGAGCGAAT
ACCTCCTCCCGGGATGAGTCGAACGCGAGTGCAGCAGAGCCGAGCTGGTC
GCAGGCTGAAGAGTATCTGAGCATGTTTGTCACTCAAAAGCTACCATATT
TGCCATTCGTGTATTTCCCGCCAGGAACAACAGCACAGCACCTTCGCAGT
GACCGTCCGTTCCTCTGGCTATGCGTTATGGCAGTTACGGCAAAGAGCCC
GAGTCAGCGACGCACGCTGTGCGATAGAATCCGCGATACTGTAGCCCAAC
GCATGGTTTTAGACTGCTACGGTCGCGATCTCGACTTCCTCCTCGGTCTC
ATGGTATACATTGCCTGGTCCAACCAGCAAATCTTCAAGAGGCTCAACAT
GACCATATACAGCCAGTTCGCCACAGCCGTAGTCTTCGACCTTATGCTCA
ACCAGGCCCCTGGCGGAGACAAACCATCACTACTGACTATACTCCAAACC
CACCCAGACGAGGATCCCTCCCCGCCACGAGCCCGAACAATGGATGAGAG
ACGCGCCGTTCTGGGCTGTTTTCTCTTAACCTCCAGTATATCCCTCTTCC
TAGAAAAGAGCGAACCCCTTCGCTGGACTCCCCACATGGACGAATGCCTA
CATCACATAAGTGAACACCCCGAATGCCTCAACGACGAGATTCTCGCCCA
GCAAGTGCGCTTCCAACTCATCAACGAGAGAATCAACACCACCGCCACAA
CCACAACCGACTTCTACCACACCAGCCTCCTATCCCCCTCCCCATTCAGA
CCCCCACTATCAATCTACACCCACGCGATAGACACCCACCTCCAACAAAC
CCAAAGCAAACTCACCCCCCACTCCCAACGCTACCGAATCCTCCAGCTCC
ACCACTCCAACACGCACCTCACGATCCACGAATCCGCCCTTCTAAAACCA
TTCCCTAACCCCTCTACCACACAACCCCCCAATCCTCCCTTAACAATCAA
TCATCATCTTCACCACCTCGAATCCCTCCACGCCTGCCTCTCCGCCGTGA
ATGCCTGGATAACCTCCTTCCTCGCCATCCCACCAGCCGAGTACGCAGGC
TTCCCCTTCCCCATTTTCTCGCAGCTCGTGCGACACCTGGCGGCGTTGTA
TCGGTTGTCTACACTTGATGATCCGAGCTGGGATCGAGGGTTTGTGCGCC
GCACCGTCGATCTGATGAGTGTGATGGATCGGTTGATTGGAAACCTGGGA
CAGGCGGCGGCGTTGGCGAGACTCGAGGCGCAGGGCGAGGATGAGGATGA
AGATGTGTTTTTTTATTCGATTGGGAAGTACGAGTCTGTTAGGTTGAAGT
GGGGAGGTGTTTTTGGGGGCAGTGCCCCTGGGAATGGGAATGGGAATGGG
GTCAATGGGGGAGTGGTGGAGGGACAGGGGGTGCAGGATGGGGTTGGGGG
AAGTAATGGGTTGGGTCTGGGTCTGGGTCAAGCTCAGGGACATGCACAGG
CACAGGCACAGGAGATGGGGGGTTGGGGGGCGGGTTATGATGATTGGTTG
TCGGAGTTTTTGAATTCGATGGTGCATTGAATGGATCAGTCCCCCACCGA
TCAGTCCCCCACCGAGTATGATCTCGCCCCGGCCCCATACGGCCGCGCCT
GCATGAATTGCTCGCAGTCTAAATGCAAATGCATCCTGCCCAAAGGGGGC
GGGCGATGCCAGAGGTGTCAGCGCCTGAACAAAGAATGTCGGCCATCGGC
GTTCCATCGACGGCAGAATGCACGCAAGCCCTCGAAGACAGGGAGATTGG
AGAAGAAGCTGGATGATTTGGTGACACTGCTTCGCGCGCAAGCGCCTTCC
CATGCCCATGCGGGGGATTACGCAGAGTTGATTGATGATCTGCGACGAGA
GCCAGATGAAGACCTCCATCACCATCCACCACCACCACGCTCGCAGATCA
AGGTTACTCGGACAGTCTCGACGGCGGAGAAATCCATCGACTGTGAGTTC
CTTAATCACTTTGCGCAGGTCGGAGCGAATACCTCCTCCCGGGATGAGTC
GAACGCGAGTGCAGCAGAGCCGAGCTGGTCGCAGGCTGAAGAGTATCTGA
GCATGTTTGTCACTCAAAAGCTACCATATTTGCCATTCGTGTATTTCCCG
CCAGGAACAACAGCACAGCACCTTCGCAGTGACCGTCCGTTCCTCTGGCT
ATGCGTTATGGCAGTTACGGCAAAGAGCCCGAGTCAGCGACGCACGCTGT
GCGATAGAATCCGCGATACTGTAGCCCAACGCATGGTTTTAGACTGCTAC
GGTCGCGATCTCGACTTCCTCCTCGGTCTCATGGTATACATTGCCTGGTC
CAACCAGCAAATCTTCAAGAGGCTCAACATGACCATATACAGCCAGTTCG
CCACAGCCGTAGTCTTCGACCTTATGCTCAACCAGGCCCCTGGCGGAGAC
AAACCATCACTACTGACTATACTCCAAACCCACCCAGACGAGGATCCCTC
CCCGCCACGAGCCCGAACAATGGATGAGAGACGCGCCGTTCTGGGCTGTT
TTCTCTTAACCTCCAGTATATCCCTCTTCCTAGAAAAGAGCGAACCCCTT
CGCTGGACTCCCCACATGGACGAATGCCTACATCACATAAGTGAACACCC
CGAATGCCTCAACGACGAGATTCTCGCCCAGCAAGTGCGCTTCCAACTCA
TCAACGAGAGAATCAACACCACCGCCACAACCACAACCGACTTCTACCAC
ACCAGCCTCCTATCCCCCTCCCCATTCAGACCCCCACTATCAATCTACAC
CCACGCGATAGACACCCACCTCCAACAAACCCAAAGCAAACTCACCCCCC
ACTCCCAACGCTACCGAATCCTCCAGCTCCACCACTCCAACACGCACCTC
ACGATCCACGAATCCGCCCTTCTAAAACCATTCCCTAACCCCTCTACCAC
ACAACCCCCCAATCCTCCCTTAACAATCAATCATCATCTTCACCACCTCG
AATCCCTCCACGCCTGCCTCTCCGCCGTGAATGCCTGGATAACCTCCTTC
CTCGCCATCCCACCAGCCGAGTACGCAGGCTTCCCCTTCCCCATTTTCTC
GCAGCTCGTGCGACACCTGGCGGCGTTGTATCGGTTGTCTACACTTGATG
ATCCGAGCTGGGATCGAGGGTTTGTGCGCCGCACCGTCGATCTGATGAGT
GTGATGGATCGGTTGATTGGAAACCTGGGACAGGCGGCGGCGTTGGCGAG
ACTCGAGGCGCAGGGCGAGGATGAGGATGAAGATGTGTTTTTTTATTCGA
TTGGGAAGTACGAGTCTGTTAGGTTGAAGTGGGGAGGTGTTTTTGGGGGC
AGTGCCCCTGGGAATGGGAATGGGAATGGGGTCAATGGGGGAGTGGTGGA
GGGACAGGGGGTGCAGGATGGGGTTGGGGGAAGTAATGGGTTGGGTCTGG
GTCTGGGTCAAGCTCAGGGACATGCACAGGCACAGGCACAGGAGATGGGG
GGTTGGGGGGCGGGTTATGATGATTGGTTGTCGGAGTTTTTGAATTCGAT
GGTGCATTGAATGGATCAGTCCCCCACCGATCAGTCCCCCACCGAGTATG
ATCTCGCCCCGGCCCCATACGGCCGCGCCTGCATGAATTGCTCGCAGTCT
AAATGCAAATGCATCCTGCCCAAAGGGGGCGGGCGATGCCAGAGGTGTCA
GCGCCTGAACAAAGAATGTCGGCCATCGGCGTTCCATCGACGGCAGAATG
CACGCAAGCCCTCGAAGACAGGGAGATTGGAGAAGAAGCTGGATGATTTG
GTGACACTGCTTCGCGCGCAAGCGCCTTCCCATGCCCATGCGGGGGATTA
CGCAGAGTTGATTGATGATCTGCGACGAGAGCCAGATGAAGACCTCCATC
ACCATCCACCACCACCACGCTCGCAGATCAAGGTTACTCGGACAGTCTCG
ACGGCGGAGAAATCCATCGACTGTGAGTTCCTTAATCACTTTGCGCAGGT
CGGAGCGAATACCTCCTCCCGGGATGAGTCGAACGCGAGTGCAGCAGAGC
CGAGCTGGTCGCAGGCTGAAGAGTATCTGAGCATGTTTGTCACTCAAAAG
CTACCATATTTGCCATTCGTGTATTTCCCGCCAGGAACAACAGCACAGCA
CCTTCGCAGTGACCGTCCGTTCCTCTGGCTATGCGTTATGGCAGTTACGG
CAAAGAGCCCGAGTCAGCGACGCACGCTGTGCGATAGAATCCGCGATACT
GTAGCCCAACGCATGGTTTTAGACTGCTACGGTCGCGATCTCGACTTCCT
CCTCGGTCTCATGGTATACATTGCCTGGTCCAACCAGCAAATCTTCAAGA
GGCTCAACATGACCATATACAGCCAGTTCGCCACAGCCGTAGTCTTCGAC
CTTATGCTCAACCAGGCCCCTGGCGGAGACAAACCATCACTACTGACTAT
ACTCCAAACCCACCCAGACGAGGATCCCTCCCCGCCACGAGCCCGAACAA
TGGATGAGAGACGCGCCGTTCTGGGCTGTTTTCTCTTAACCTCCAGTATA
TCCCTCTTCCTAGAAAAGAGCGAACCCCTTCGCTGGACTCCCCACATGGA
CGAATGCCTACATCACATAAGTGAACACCCCGAATGCCTCAACGACGAGA
TTCTCGCCCAGCAAGTGCGCTTCCAACTCATCAACGAGAGAATCAACACC
ACCGCCACAACCACAACCGACTTCTACCACACCAGCCTCCTATCCCCCTC
CCCATTCAGACCCCCACTATCAATCTACACCCACGCGATAGACACCCACC
TCCAACAAACCCAAAGCAAACTCACCCCCCACTCCCAACGCTACCGAATC
CTCCAGCTCCACCACTCCAACACGCACCTCACGATCCACGAATCCGCCCT
TCTAAAACCATTCCCTAACCCCTCTACCACACAACCCCCCAATCCTCCCT
TAACAATCAATCATCATCTTCACCACCTCGAATCCCTCCACGCCTGCCTC
TCCGCCGTGAATGCCTGGATAACCTCCTTCCTCGCCATCCCACCAGCCGA
GTACGCAGGCTTCCCCTTCCCCATTTTCTCGCAGCTCGTGCGACACCTGG
CGGCGTTGTATCGGTTGTCTACACTTGATGATCCGAGCTGGGATCGAGGG
TTTGTGCGCCGCACCGTCGATCTGATGAGTGTGATGGATCGGTTGATTGG
AAACCTGGGACAGGCGGCGGCGTTGGCGAGACTCGAGGCGCAGGGCGAGG
ATGAGGATGAAGATGTGTTTTTTTATTCGATTGGGAAGTACGAGTCTGTT
AGGTTGAAGTGGGGAGGTGTTTTTGGGGGCAGTGCCCCTGGGAATGGGAA
TGGGAATGGGGTCAATGGGGGAGTGGTGGAGGGACAGGGGGTGCAGGATG
GGGTTGGGGGAAGTAATGGGTTGGGTCTGGGTCTGGGTCAAGCTCAGGGA
CATGCACAGGCACAGGCACAGGAGATGGGGGGTTGGGGGGCGGGTTATGA
TGATTGGTTGTCGGAGTTTTTGAATTCGATGGTGCATTGAATGGATCAGT
CCCCCACCGATCAGTCCCCCACCGAGTATGATCTCGCCCCGGCCCCATAC
GGCCGCGCCTGCATGAATTGCTCGCAGTCTAAATGCAAATGCATCCTGCC
CAAAGGGGGCGGGCGATGCCAGAGGTGTCAGCGCCTGAACAAAGAATGTC
GGCCATCGGCGTTCCATCGACGGCAGAATGCACGCAAGCCCTCGAAGACA
GGGAGATTGGAGAAGAAGCTGGATGATTTGGTGACACTGCTTCGCGCGCA
AGCGCCTTCCCATGCCCATGCGGGGGATTACGCAGAGTTGATTGATGATC
TGCGACGAGAGCCAGATGAAGACCTCCATCACCATCCACCACCACCACGC
TCGCAGATCAAGGTTACTCGGACAGTCTCGACGGCGGAGAAATCCATCGA
CTGTGAGTTCCTTAATCACTTTGCGCAGGTCGGAGCGAATACCTCCTCCC
GGGATGAGTCGAACGCGAGTGCAGCAGAGCCGAGCTGGTCGCAGGCTGAA
GAGTATCTGAGCATGTTTGTCACTCAAAAGCTACCATATTTGCCATTCGT
GTATTTCCCGCCAGGAACAACAGCACAGCACCTTCGCAGTGACCGTCCGT
TCCTCTGGCTATGCGTTATGGCAGTTACGGCAAAGAGCCCGAGTCAGCGA
CGCACGCTGTGCGATAGAATCCGCGATACTGTAGCCCAACGCATGGTTTT
AGACTGCTACGGTCGCGATCTCGACTTCCTCCTCGGTCTCATGGTATACA
TTGCCTGGTCCAACCAGCAAATCTTCAAGAGGCTCAACATGACCATATAC
AGCCAGTTCGCCACAGCCGTAGTCTTCGACCTTATGCTCAACCAGGCCCC
TGGCGGAGACAAACCATCACTACTGACTATACTCCAAACCCACCCAGACG
AGGATCCCTCCCCGCCACGAGCCCGAACAATGGATGAGAGACGCGCCGTT
CTGGGCTGTTTTCTCTTAACCTCCAGTATATCCCTCTTCCTAGAAAAGAG
CGAACCCCTTCGCTGGACTCCCCACATGGACGAATGCCTACATCACATAA
GTGAACACCCCGAATGCCTCAACGACGAGATTCTCGCCCAGCAAGTGCGC
TTCCAACTCATCAACGAGAGAATCAACACCACCGCCACAACCACAACCGA
CTTCTACCACACCAGCCTCCTATCCCCCTCCCCATTCAGACCCCCACTAT
CAATCTACACCCACGCGATAGACACCCACCTCCAACAAACCCAAAGCAAA
CTCACCCCCCACTCCCAACGCTACCGAATCCTCCAGCTCCACCACTCCAA
CACGCACCTCACGATCCACGAATCCGCCCTTCTAAAACCATTCCCTAACC
CCTCTACCACACAACCCCCCAATCCTCCCTTAACAATCAATCATCATCTT
CACCACCTCGAATCCCTCCACGCCTGCCTCTCCGCCGTGAATGCCTGGAT
AACCTCCTTCCTCGCCATCCCACCAGCCGAGTACGCAGGCTTCCCCTTCC
CCATTTTCTCGCAGCTCGTGCGACACCTGGCGGCGTTGTATCGGTTGTCT
ACACTTGATGATCCGAGCTGGGATCGAGGGTTTGTGCGCCGCACCGTCGA
TCTGATGAGTGTGATGGATCGGTTGATTGGAAACCTGGGACAGGCGGCGG
CGTTGGCGAGACTCGAGGCGCAGGGCGAGGATGAGGATGAAGATGTGTTT
TTTTATTCGATTGGGAAGTACGAGTCTGTTAGGTTGAAGTGGGGAGGTGT
TTTTGGGGGCAGTGCCCCTGGGAATGGGAATGGGAATGGGGTCAATGGGG
GAGTGGTGGAGGGACAGGGGGTGCAGGATGGGGTTGGGGGAAGTAATGGG
TTGGGTCTGGGTCTGGGTCAAGCTCAGGGACATGCACAGGCACAGGCACA
GGAGATGGGGGGTTGGGGGGCGGGTTATGATGATTGGTTGTCGGAGTTTT
TGAATTCGATGGTGCATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR036864 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An17 | supercontig | An17:153116..155273 + |
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