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CBS51388_010544-T1, CBS51388_010544-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_010544-T1
Unique NameCBS51388_010544-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An17:164005..165302-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_010544-T1 ID=CBS51388_010544-T1|Name=CBS51388_010544-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1298bp|location=Sequence derived from alignment at An17:164005..165302- (Aspergillus niger CBS 513.88)
ATGTCTGATCAGCCGGAATCCCTCCTATCTCCGAAGAACTCCGACTCCGG
CCTCCATATCCAGCTCCACCCTCTGATCCTCCTGACCATCTCAGACCACA
TCACCCGCCATGCCGCCCGCTCTCAGCAAGGACCTATAGTGGGAGCGCTT
CTAGGCCAGCAGAACGGACGCGAAATCACCTTGGAACACGTCTTTGAGTG
TATTGTGAACGAGGGCCCCAATGGAGATCTGCAGATTCCGCAGGACTGGT
TCGTAGAGAGAGTCAAGCAATGTAAGTCCCGTCCACTTGTATCTCAACCA
TCTACATGCATCTGGGCGCTGACCCCCTCCAAGTCAAAGATGTACACAAA
GCTCCTGCCCTTGACCTTGTCGGCTGGTGGTCAACTGCTCCCCCGTCCGG
CCCCAACACCGTCCACCTCCCAATCCATCGCCAGATCCTCCACAACCACA
ACGAGTCCGCCGTGTTCCTCGCGTTCCACCCATCCCTGGTACAAGATGCA
TCCTCCAACGGCGGCAAGCTCCCTGTGACAATCTACGAAAGCGTATACGA
GGGCGAAAATGCGACAGAGAACAGCAAGACAATGCAGGTTGATGGAGAGG
AACAATCCCTAACGATTCGCTTCCGAGAATTGCCCTACTCCGTCGAAACG
GGGGAAGCCGAGATGATTGGCGTCGACACAGTAGCAAGGACAGCCAGAAA
CGCCGCCGCAGACACACAAGGCACGGCCTCTCTCACAAAGCAATCAGCCG
GCAAAGAACCCAGCAAGGATCAGTCAGAAGTGCTCTCCCCCGAGGAAGAA
GAACGTAAGCACTCCACCACCCCCATACCTAAAACCAAAACCAAAGTCCA
TCACTAACCAAAACCACCCCACACAGTAATCGCCAGCCTCACCACTCGCC
TCAACGCCATCAAGACCCTCGAATCCCGTATCTCCCTCATCAAATCCTAC
GTCGCGAGCAACTCCACCTCCGATCCAGAAACCCCCACCTCAACAACAAC
CCTCTCCCACCCCATCCTCCGCAACATCAACGCTCTCCTCTCGCACCTCT
CCCTTCTCACCCCTGATGAACGAAGCGCCTTCACGGCCGAAGCCATCGCC
CAGAGCAACGACGTCCACCTCGTCTCCCTATTAGGACAACTCGGCCAGAG
CATCAGCGCGATGCGCGAGCTCGGGAAACGAACTGCGCTGATGAACAGTG
TCAGACGGACGATGATGTCGCGGAAAACGCAACAATTATCTTGGCAGAAT
CGGTTCACTGAACCTTTTTCGACTGGGGATGGGGTGAGTCATGGATAG
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Coding sequence (CDS) from alignment at An17:164005..165302-

>CBS51388_010544-T1 ID=CBS51388_010544-T1|Name=CBS51388_010544-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3492bp|location=Sequence derived from alignment at An17:164005..165302- (Aspergillus niger CBS 513.88)
TAATCGCCAGCCTCACCACTCGCCTCAACGCCATCAAGACCCTCGAATCC
CGTATCTCCCTCATCAAATCCTACGTCGCGAGCAACTCCACCTCCGATCC
AGAAACCCCCACCTCAACAACAACCCTCTCCCACCCCATCCTCCGCAACA
TCAACGCTCTCCTCTCGCACCTCTCCCTTCTCACCCCTGATGAACGAAGC
GCCTTCACGGCCGAAGCCATCGCCCAGAGCAACGACGTCCACCTCGTCTC
CCTATTAGGACAACTCGGCCAGAGCATCAGCGCGATGCGCGAGCTCGGGA
AACGAACTGCGCTGATGAACAGTGTCAGACGGACGATGATGTCGCGGAAA
ACGCAACAATTATCTTGGCAGAATCGGTTCACTGAACCTTTTTCGACTGG
GGATGGGGTGAGTCATGGATAGTCAAAGATGTACACAAAGCTCCTGCCCT
TGACCTTGTCGGCTGGTGGTCAACTGCTCCCCCGTCCGGCCCCAACACCG
TCCACCTCCCAATCCATCGCCAGATCCTCCACAACCACAACGAGTCCGCC
GTGTTCCTCGCGTTCCACCCATCCCTGGTACAAGATGCATCCTCCAACGG
CGGCAAGCTCCCTGTGACAATCTACGAAAGCGTATACGAGGGCGAAAATG
CGACAGAGAACAGCAAGACAATGCAGGTTGATGGAGAGGAACAATCCCTA
ACGATTCGCTTCCGAGAATTGCCCTACTCCGTCGAAACGGGGGAAGCCGA
GATGATTGGCGTCGACACAGTAGCAAGGACAGCCAGAAACGCCGCCGCAG
ACACACAAGGCACGGCCTCTCTCACAAAGCAATCAGCCGGCAAAGAACCC
AGCAAGGATCAGTCAGAAGTGCTCTCCCCCGAGGAAGAAGAACATGTCTG
ATCAGCCGGAATCCCTCCTATCTCCGAAGAACTCCGACTCCGGCCTCCAT
ATCCAGCTCCACCCTCTGATCCTCCTGACCATCTCAGACCACATCACCCG
CCATGCCGCCCGCTCTCAGCAAGGACCTATAGTGGGAGCGCTTCTAGGCC
AGCAGAACGGACGCGAAATCACCTTGGAACACGTCTTTGAGTGTATTGTG
AACGAGGGCCCCAATGGAGATCTGCAGATTCCGCAGGACTGGTTCGTAGA
GAGAGTCAAGCAATTAATCGCCAGCCTCACCACTCGCCTCAACGCCATCA
AGACCCTCGAATCCCGTATCTCCCTCATCAAATCCTACGTCGCGAGCAAC
TCCACCTCCGATCCAGAAACCCCCACCTCAACAACAACCCTCTCCCACCC
CATCCTCCGCAACATCAACGCTCTCCTCTCGCACCTCTCCCTTCTCACCC
CTGATGAACGAAGCGCCTTCACGGCCGAAGCCATCGCCCAGAGCAACGAC
GTCCACCTCGTCTCCCTATTAGGACAACTCGGCCAGAGCATCAGCGCGAT
GCGCGAGCTCGGGAAACGAACTGCGCTGATGAACAGTGTCAGACGGACGA
TGATGTCGCGGAAAACGCAACAATTATCTTGGCAGAATCGGTTCACTGAA
CCTTTTTCGACTGGGGATGGGGTGAGTCATGGATAGTCAAAGATGTACAC
AAAGCTCCTGCCCTTGACCTTGTCGGCTGGTGGTCAACTGCTCCCCCGTC
CGGCCCCAACACCGTCCACCTCCCAATCCATCGCCAGATCCTCCACAACC
ACAACGAGTCCGCCGTGTTCCTCGCGTTCCACCCATCCCTGGTACAAGAT
GCATCCTCCAACGGCGGCAAGCTCCCTGTGACAATCTACGAAAGCGTATA
CGAGGGCGAAAATGCGACAGAGAACAGCAAGACAATGCAGGTTGATGGAG
AGGAACAATCCCTAACGATTCGCTTCCGAGAATTGCCCTACTCCGTCGAA
ACGGGGGAAGCCGAGATGATTGGCGTCGACACAGTAGCAAGGACAGCCAG
AAACGCCGCCGCAGACACACAAGGCACGGCCTCTCTCACAAAGCAATCAG
CCGGCAAAGAACCCAGCAAGGATCAGTCAGAAGTGCTCTCCCCCGAGGAA
GAAGAACATGTCTGATCAGCCGGAATCCCTCCTATCTCCGAAGAACTCCG
ACTCCGGCCTCCATATCCAGCTCCACCCTCTGATCCTCCTGACCATCTCA
GACCACATCACCCGCCATGCCGCCCGCTCTCAGCAAGGACCTATAGTGGG
AGCGCTTCTAGGCCAGCAGAACGGACGCGAAATCACCTTGGAACACGTCT
TTGAGTGTATTGTGAACGAGGGCCCCAATGGAGATCTGCAGATTCCGCAG
GACTGGTTCGTAGAGAGAGTCAAGCAATTAATCGCCAGCCTCACCACTCG
CCTCAACGCCATCAAGACCCTCGAATCCCGTATCTCCCTCATCAAATCCT
ACGTCGCGAGCAACTCCACCTCCGATCCAGAAACCCCCACCTCAACAACA
ACCCTCTCCCACCCCATCCTCCGCAACATCAACGCTCTCCTCTCGCACCT
CTCCCTTCTCACCCCTGATGAACGAAGCGCCTTCACGGCCGAAGCCATCG
CCCAGAGCAACGACGTCCACCTCGTCTCCCTATTAGGACAACTCGGCCAG
AGCATCAGCGCGATGCGCGAGCTCGGGAAACGAACTGCGCTGATGAACAG
TGTCAGACGGACGATGATGTCGCGGAAAACGCAACAATTATCTTGGCAGA
ATCGGTTCACTGAACCTTTTTCGACTGGGGATGGGGTGAGTCATGGATAG
TCAAAGATGTACACAAAGCTCCTGCCCTTGACCTTGTCGGCTGGTGGTCA
ACTGCTCCCCCGTCCGGCCCCAACACCGTCCACCTCCCAATCCATCGCCA
GATCCTCCACAACCACAACGAGTCCGCCGTGTTCCTCGCGTTCCACCCAT
CCCTGGTACAAGATGCATCCTCCAACGGCGGCAAGCTCCCTGTGACAATC
TACGAAAGCGTATACGAGGGCGAAAATGCGACAGAGAACAGCAAGACAAT
GCAGGTTGATGGAGAGGAACAATCCCTAACGATTCGCTTCCGAGAATTGC
CCTACTCCGTCGAAACGGGGGAAGCCGAGATGATTGGCGTCGACACAGTA
GCAAGGACAGCCAGAAACGCCGCCGCAGACACACAAGGCACGGCCTCTCT
CACAAAGCAATCAGCCGGCAAAGAACCCAGCAAGGATCAGTCAGAAGTGC
TCTCCCCCGAGGAAGAAGAACATGTCTGATCAGCCGGAATCCCTCCTATC
TCCGAAGAACTCCGACTCCGGCCTCCATATCCAGCTCCACCCTCTGATCC
TCCTGACCATCTCAGACCACATCACCCGCCATGCCGCCCGCTCTCAGCAA
GGACCTATAGTGGGAGCGCTTCTAGGCCAGCAGAACGGACGCGAAATCAC
CTTGGAACACGTCTTTGAGTGTATTGTGAACGAGGGCCCCAATGGAGATC
TGCAGATTCCGCAGGACTGGTTCGTAGAGAGAGTCAAGCAAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0008180COP9 signalosome
Vocabulary: Biological Process
TermDefinition
GO:0000338protein deneddylation
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_010544CBS51388_010544Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010544-T1CBS51388_010544-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010544-T1.cdsCBS51388_010544-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_010544-T1.exon3CBS51388_010544-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_010544-T1.exon2CBS51388_010544-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_010544-T1.exon1CBS51388_010544-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteMEROPS:MER0030137
DBxrefInterPro:IPR033859
DBxrefInterPro:IPR037518
DBxrefInterPro:IPR000555
DBxrefInterPro:IPR024969
DBxrefPFAM:PF13012
DBxrefPFAM:PF01398
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An17supercontigAn17:164005..165302 -
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