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Sequences
The following sequences are available for this feature:
mRNA from alignment at An17:184890..186647+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010552-T1 ID=CBS51388_010552-T1|Name=CBS51388_010552-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1758bp|location=Sequence derived from alignment at An17:184890..186647+ (Aspergillus niger CBS 513.88)
ATGAAAACAAGAATAACCTACCTCCAACCCCCCTCCTCGCCATTCACCTC
CACCCAAGCGACCCTCACCCCGTCATCACTCAAGATCAGCGATCTAGATG
CTGCAAAAGAAGTCCGCGTTACGGTTGATCTGAGTGAGGTGGATGATGAT
GAGGTATATTGCCCTCTCTCTTTTTTTTTTTTTTTTTTTACTCCCTCGGT
GTGATGTAATTTAGCTAATGCATGTGGAATCTCATCTATCTAGGTCCGGA
GTATCTTGACCAATCTGCACGAAGTACATATCCGCTGGGCGAGGGAACAA
CCATATGGGATTGTTTCGCCGTTCGGGAGTAGGGTTTCGGCGGGGTTGGG
GGTGGGTGTGAGTCCTCTTCAGGGTGGGGATGATGGGGATGGGGAAGGCG
TATGTCGTCTTCTACGGAGGATGTTTGGGACGGGGATTGAGTGTGCTAAT
TATATGGTACGTTTTACATTTTCAGTTCTGGTGAGGTATGTACATGGGAT
GCTTATTCGGGATATTTATACATGTAGGACTCATTCACCAGCCCTCCCGT
TGTCTCTACGCGTTTCGCGTCCACGTCCACGTATCAATTCCACTCTTCCC
TGCCGGAACATAATCTTGGGGAGTATATAGTGAAGAATATCTGTCGCGAG
GAGGGTGCTGCGTGCGCTGCGGAATGGGGTGCCGCTGATAGCATCGACGT
TGACTATGATGCTGTGTCGCGGGCGCTAGTGGTCTCCGGGTACTGGGGCC
AGCCTGTTACTCCGGAGGGATGGACGGAGGAGATTCGTGCGCCGGGGAGG
GATCGTGATCGCGTGGAGGTCGGGTTGTTGGGGACGGAGAAGGCGGTCGA
GGCGGAGGAGATTAAGGTTGGTGGGTTGTTGGGTGTTGTGGGTGTTGATA
AGGAGTTGAGTATGTTTTCCCTTTCCTCTATTTGTTTGGCTGAGGGGATA
GTGGTGTGCTAACTGCTCAGAACCAACGCTATTCTCCTTCCCCTCCAGAC
ACCATGTCCTCCCTCGCGAGGCGACTTTCGACGTCTCCTTCCCCCGTCCG
ACGGGCACGCATCCAACCATGACCATTTCCCTGTCCCCGGCTGCGTTGGA
GTACCCCGCTGCGCCGGAGGACACGACCTGTGCGCTGCATGCGTATCTGA
CGCTGCCGTCGTATATCTTCGGGGACAAGTACCAGCTGAGCACGGATGAT
CCGCTGTTCCTGGAGTCGCATCATCTGGTGGCGTTGCGGGCAGTGAGCGG
GGCAACGGACCTGGAGGCGCCGGATTGGTTTGTCCCGCACTGGGGCTCGA
ATTGGCTGCTCGAGCTGGCGACGCCGTCTGCTGGCCAGGTGCCAGAGGAG
TGGAACGTCACGGTGCCGCTGCATCTGCGGTACCTGCGGCCGTCGGAGAG
TGGGTACCGCTCCGCGGGGGTGCCGTGGCCGGTGGTGTTCTGGGCTTGCA
CGGCGGAAGAGGGCACGAAGATGGGCACAAACCCGTTCGATCGCCTGAAC
CTCGGCTGGGATGGGATGTTTGGCCCACGGACGATGTTCTACCAGGTGCA
TCCTAGTGGAGAGAAGACCCGACATGTCGAAGACTTGGATGTCCCGGTGC
TCCGGTTAGAGGAGGGCGGATTCTTCAGTAGCAAGACAGTGGAGCTGGGC
ACGATGGCAGCGATCGTCCTGGGATTGCTGTGGGTGCTGTGGAAGCTGGG
TAGTGTTGCACGGTCTTCCGGACGGAAGAAGAGCGACAAGGAGAAGAAGT
CGCAGTAA back to topCoding sequence (CDS) from alignment at An17:184890..186647+ >CBS51388_010552-T1 ID=CBS51388_010552-T1|Name=CBS51388_010552-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6144bp|location=Sequence derived from alignment at An17:184890..186647+ (Aspergillus niger CBS 513.88)
ATGAAAACAAGAATAACCTACCTCCAACCCCCCTCCTCGCCATTCACCTC
CACCCAAGCGACCCTCACCCCGTCATCACTCAAGATCAGCGATCTAGATG
CTGCAAAAGAAGTCCGCGTTACGGTTGATCTGAGTGAGGTGGATGATGAT
GAGGTCCGGAGTATCTTGACCAATCTGCACGAAGTACATATCCGCTGGGC
GAGGGAACAACCATATGGGATTGTTTCGCCGTTCGGGAGTAGGGTTTCGG
CGGGGTTGGGGGTGGGTGTGAGTCCTCTTCAGGGTGGGGATGATGGGGAT
GGGGAAGGCGTATGTCGTCTTCTACGGAGGATGTTTGGGACGGGGATTGA
GTGTGCTAATTATATGGACTCATTCACCAGCCCTCCCGTTGTCTCTACGC
GTTTCGCGTCCACGTCCACGTATCAATTCCACTCTTCCCTGCCGGAACAT
AATCTTGGGGAGTATATAGTGAAGAATATCTGTCGCGAGGAGGGTGCTGC
GTGCGCTGCGGAATGGGGTGCCGCTGATAGCATCGACGTTGACTATGATG
CTGTGTCGCGGGCGCTAGTGGTCTCCGGGTACTGGGGCCAGCCTGTTACT
CCGGAGGGATGGACGGAGGAGATTCGTGCGCCGGGGAGGGATCGTGATCG
CGTGGAGGTCGGGTTGTTGGGGACGGAGAAGGCGGTCGAGGCGGAGGAGA
TTAAGGTTGGTGGGTTGTTGGGTGTTGTGGGTGTTGATAAGGAGTTGAAA
CCAACGCTATTCTCCTTCCCCTCCAGACACCATGTCCTCCCTCGCGAGGC
GACTTTCGACGTCTCCTTCCCCCGTCCGACGGGCACGCATCCAACCATGA
CCATTTCCCTGTCCCCGGCTGCGTTGGAGTACCCCGCTGCGCCGGAGGAC
ACGACCTGTGCGCTGCATGCGTATCTGACGCTGCCGTCGTATATCTTCGG
GGACAAGTACCAGCTGAGCACGGATGATCCGCTGTTCCTGGAGTCGCATC
ATCTGGTGGCGTTGCGGGCAGTGAGCGGGGCAACGGACCTGGAGGCGCCG
GATTGGTTTGTCCCGCACTGGGGCTCGAATTGGCTGCTCGAGCTGGCGAC
GCCGTCTGCTGGCCAGGTGCCAGAGGAGTGGAACGTCACGGTGCCGCTGC
ATCTGCGGTACCTGCGGCCGTCGGAGAGTGGGTACCGCTCCGCGGGGGTG
CCGTGGCCGGTGGTGTTCTGGGCTTGCACGGCGGAAGAGGGCACGAAGAT
GGGCACAAACCCGTTCGATCGCCTGAACCTCGGCTGGGATGGGATGTTTG
GCCCACGGACGATGTTCTACCAGGTGCATCCTAGTGGAGAGAAGACCCGA
CATGTCGAAGACTTGGATGTCCCGGTGCTCCGGTTAGAGGAGGGCGGATT
CTTCAGTAGCAAGACAGTGGAGCTGGGCACGATGGCAGCGATCGTCCTGG
GATTGCTGTGGGTGCTGTGGAAGCTGGGTAGTGTTGCACGGTCTTCCGGA
CGGAAGAAGAGCGACAAGGAGAAGAAGTCGCAGTAAATGAAAACAAGAAT
AACCTACCTCCAACCCCCCTCCTCGCCATTCACCTCCACCCAAGCGACCC
TCACCCCGTCATCACTCAAGATCAGCGATCTAGATGCTGCAAAAGAAGTC
CGCGTTACGGTTGATCTGAGTGAGGTGGATGATGATGAGGTCCGGAGTAT
CTTGACCAATCTGCACGAAGTACATATCCGCTGGGCGAGGGAACAACCAT
ATGGGATTGTTTCGCCGTTCGGGAGTAGGGTTTCGGCGGGGTTGGGGGTG
GGTGTGAGTCCTCTTCAGGGTGGGGATGATGGGGATGGGGAAGGCGTATG
TCGTCTTCTACGGAGGATGTTTGGGACGGGGATTGAGTGTGCTAATTATA
TGGACTCATTCACCAGCCCTCCCGTTGTCTCTACGCGTTTCGCGTCCACG
TCCACGTATCAATTCCACTCTTCCCTGCCGGAACATAATCTTGGGGAGTA
TATAGTGAAGAATATCTGTCGCGAGGAGGGTGCTGCGTGCGCTGCGGAAT
GGGGTGCCGCTGATAGCATCGACGTTGACTATGATGCTGTGTCGCGGGCG
CTAGTGGTCTCCGGGTACTGGGGCCAGCCTGTTACTCCGGAGGGATGGAC
GGAGGAGATTCGTGCGCCGGGGAGGGATCGTGATCGCGTGGAGGTCGGGT
TGTTGGGGACGGAGAAGGCGGTCGAGGCGGAGGAGATTAAGGTTGGTGGG
TTGTTGGGTGTTGTGGGTGTTGATAAGGAGTTGAAACCAACGCTATTCTC
CTTCCCCTCCAGACACCATGTCCTCCCTCGCGAGGCGACTTTCGACGTCT
CCTTCCCCCGTCCGACGGGCACGCATCCAACCATGACCATTTCCCTGTCC
CCGGCTGCGTTGGAGTACCCCGCTGCGCCGGAGGACACGACCTGTGCGCT
GCATGCGTATCTGACGCTGCCGTCGTATATCTTCGGGGACAAGTACCAGC
TGAGCACGGATGATCCGCTGTTCCTGGAGTCGCATCATCTGGTGGCGTTG
CGGGCAGTGAGCGGGGCAACGGACCTGGAGGCGCCGGATTGGTTTGTCCC
GCACTGGGGCTCGAATTGGCTGCTCGAGCTGGCGACGCCGTCTGCTGGCC
AGGTGCCAGAGGAGTGGAACGTCACGGTGCCGCTGCATCTGCGGTACCTG
CGGCCGTCGGAGAGTGGGTACCGCTCCGCGGGGGTGCCGTGGCCGGTGGT
GTTCTGGGCTTGCACGGCGGAAGAGGGCACGAAGATGGGCACAAACCCGT
TCGATCGCCTGAACCTCGGCTGGGATGGGATGTTTGGCCCACGGACGATG
TTCTACCAGGTGCATCCTAGTGGAGAGAAGACCCGACATGTCGAAGACTT
GGATGTCCCGGTGCTCCGGTTAGAGGAGGGCGGATTCTTCAGTAGCAAGA
CAGTGGAGCTGGGCACGATGGCAGCGATCGTCCTGGGATTGCTGTGGGTG
CTGTGGAAGCTGGGTAGTGTTGCACGGTCTTCCGGACGGAAGAAGAGCGA
CAAGGAGAAGAAGTCGCAGTAAATGAAAACAAGAATAACCTACCTCCAAC
CCCCCTCCTCGCCATTCACCTCCACCCAAGCGACCCTCACCCCGTCATCA
CTCAAGATCAGCGATCTAGATGCTGCAAAAGAAGTCCGCGTTACGGTTGA
TCTGAGTGAGGTGGATGATGATGAGGTCCGGAGTATCTTGACCAATCTGC
ACGAAGTACATATCCGCTGGGCGAGGGAACAACCATATGGGATTGTTTCG
CCGTTCGGGAGTAGGGTTTCGGCGGGGTTGGGGGTGGGTGTGAGTCCTCT
TCAGGGTGGGGATGATGGGGATGGGGAAGGCGTATGTCGTCTTCTACGGA
GGATGTTTGGGACGGGGATTGAGTGTGCTAATTATATGGACTCATTCACC
AGCCCTCCCGTTGTCTCTACGCGTTTCGCGTCCACGTCCACGTATCAATT
CCACTCTTCCCTGCCGGAACATAATCTTGGGGAGTATATAGTGAAGAATA
TCTGTCGCGAGGAGGGTGCTGCGTGCGCTGCGGAATGGGGTGCCGCTGAT
AGCATCGACGTTGACTATGATGCTGTGTCGCGGGCGCTAGTGGTCTCCGG
GTACTGGGGCCAGCCTGTTACTCCGGAGGGATGGACGGAGGAGATTCGTG
CGCCGGGGAGGGATCGTGATCGCGTGGAGGTCGGGTTGTTGGGGACGGAG
AAGGCGGTCGAGGCGGAGGAGATTAAGGTTGGTGGGTTGTTGGGTGTTGT
GGGTGTTGATAAGGAGTTGAAACCAACGCTATTCTCCTTCCCCTCCAGAC
ACCATGTCCTCCCTCGCGAGGCGACTTTCGACGTCTCCTTCCCCCGTCCG
ACGGGCACGCATCCAACCATGACCATTTCCCTGTCCCCGGCTGCGTTGGA
GTACCCCGCTGCGCCGGAGGACACGACCTGTGCGCTGCATGCGTATCTGA
CGCTGCCGTCGTATATCTTCGGGGACAAGTACCAGCTGAGCACGGATGAT
CCGCTGTTCCTGGAGTCGCATCATCTGGTGGCGTTGCGGGCAGTGAGCGG
GGCAACGGACCTGGAGGCGCCGGATTGGTTTGTCCCGCACTGGGGCTCGA
ATTGGCTGCTCGAGCTGGCGACGCCGTCTGCTGGCCAGGTGCCAGAGGAG
TGGAACGTCACGGTGCCGCTGCATCTGCGGTACCTGCGGCCGTCGGAGAG
TGGGTACCGCTCCGCGGGGGTGCCGTGGCCGGTGGTGTTCTGGGCTTGCA
CGGCGGAAGAGGGCACGAAGATGGGCACAAACCCGTTCGATCGCCTGAAC
CTCGGCTGGGATGGGATGTTTGGCCCACGGACGATGTTCTACCAGGTGCA
TCCTAGTGGAGAGAAGACCCGACATGTCGAAGACTTGGATGTCCCGGTGC
TCCGGTTAGAGGAGGGCGGATTCTTCAGTAGCAAGACAGTGGAGCTGGGC
ACGATGGCAGCGATCGTCCTGGGATTGCTGTGGGTGCTGTGGAAGCTGGG
TAGTGTTGCACGGTCTTCCGGACGGAAGAAGAGCGACAAGGAGAAGAAGT
CGCAGTAAATGAAAACAAGAATAACCTACCTCCAACCCCCCTCCTCGCCA
TTCACCTCCACCCAAGCGACCCTCACCCCGTCATCACTCAAGATCAGCGA
TCTAGATGCTGCAAAAGAAGTCCGCGTTACGGTTGATCTGAGTGAGGTGG
ATGATGATGAGGTCCGGAGTATCTTGACCAATCTGCACGAAGTACATATC
CGCTGGGCGAGGGAACAACCATATGGGATTGTTTCGCCGTTCGGGAGTAG
GGTTTCGGCGGGGTTGGGGGTGGGTGTGAGTCCTCTTCAGGGTGGGGATG
ATGGGGATGGGGAAGGCGTATGTCGTCTTCTACGGAGGATGTTTGGGACG
GGGATTGAGTGTGCTAATTATATGGACTCATTCACCAGCCCTCCCGTTGT
CTCTACGCGTTTCGCGTCCACGTCCACGTATCAATTCCACTCTTCCCTGC
CGGAACATAATCTTGGGGAGTATATAGTGAAGAATATCTGTCGCGAGGAG
GGTGCTGCGTGCGCTGCGGAATGGGGTGCCGCTGATAGCATCGACGTTGA
CTATGATGCTGTGTCGCGGGCGCTAGTGGTCTCCGGGTACTGGGGCCAGC
CTGTTACTCCGGAGGGATGGACGGAGGAGATTCGTGCGCCGGGGAGGGAT
CGTGATCGCGTGGAGGTCGGGTTGTTGGGGACGGAGAAGGCGGTCGAGGC
GGAGGAGATTAAGGTTGGTGGGTTGTTGGGTGTTGTGGGTGTTGATAAGG
AGTTGAAACCAACGCTATTCTCCTTCCCCTCCAGACACCATGTCCTCCCT
CGCGAGGCGACTTTCGACGTCTCCTTCCCCCGTCCGACGGGCACGCATCC
AACCATGACCATTTCCCTGTCCCCGGCTGCGTTGGAGTACCCCGCTGCGC
CGGAGGACACGACCTGTGCGCTGCATGCGTATCTGACGCTGCCGTCGTAT
ATCTTCGGGGACAAGTACCAGCTGAGCACGGATGATCCGCTGTTCCTGGA
GTCGCATCATCTGGTGGCGTTGCGGGCAGTGAGCGGGGCAACGGACCTGG
AGGCGCCGGATTGGTTTGTCCCGCACTGGGGCTCGAATTGGCTGCTCGAG
CTGGCGACGCCGTCTGCTGGCCAGGTGCCAGAGGAGTGGAACGTCACGGT
GCCGCTGCATCTGCGGTACCTGCGGCCGTCGGAGAGTGGGTACCGCTCCG
CGGGGGTGCCGTGGCCGGTGGTGTTCTGGGCTTGCACGGCGGAAGAGGGC
ACGAAGATGGGCACAAACCCGTTCGATCGCCTGAACCTCGGCTGGGATGG
GATGTTTGGCCCACGGACGATGTTCTACCAGGTGCATCCTAGTGGAGAGA
AGACCCGACATGTCGAAGACTTGGATGTCCCGGTGCTCCGGTTAGAGGAG
GGCGGATTCTTCAGTAGCAAGACAGTGGAGCTGGGCACGATGGCAGCGAT
CGTCCTGGGATTGCTGTGGGTGCTGTGGAAGCTGGGTAGTGTTGCACGGT
CTTCCGGACGGAAGAAGAGCGACAAGGAGAAGAAGTCGCAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005789 | endoplasmic reticulum membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006506 | GPI anchor biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013233 |
| DBxref | PFAM:PF08320 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An17 | supercontig | An17:184890..186647 + |
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