|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An17:210262..211949- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010561-T1 ID=CBS51388_010561-T1|Name=CBS51388_010561-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1688bp|location=Sequence derived from alignment at An17:210262..211949- (Aspergillus niger CBS 513.88)
ATGACTGCCCCTCTTCCTGCAGCCCAAACTAACCCCGCCTTCCCCTCCGC
AGCGCAGTATCTCACCTCCGACAAGTCCAGCTTCGCCTCGGTCTCGGCCC
ACGAACGCTGGCCGGTCATCTTGGTATGCTCCTTGCAATCTAAACTATTG
CAGTACATGCCTCGACTAATACACTTCATATACAGACTGGCGCGATTGAT
GATCTGCACCGCAGCGTTGCCGATGTAACCGACGAGGAGAAGCGTCAGGA
AGGGAAAGCGATCATTGGGAGCCTCGCAGCTTTCAAATATGAGCTGCAGC
ACAACAGACAGTTGACGTGAGATCAATATCCCCGTCTACACGATCTCCAT
AAACAAAGCAGGCATTGACTCAGCTACAGCCCTCTCCCCGACGACGGCCA
GCCCGACATTGCGGCGTACAACCAGGAGCTGGAGCAGCGGGGAAACCCTT
CATGGCACGACGTCGCATGGCTCTACTCAGAATGCTACCTCTGTGCGTGC
AATTGGCATACCTCCATACATACACCCCAGCTGACACCCACCCAGACAGA
CGCCTGAGCACCTTCTTCTCCCTCTCCAAGCACTGGAAGGGCTATGACGT
GTTCGCCCGCCAGAAGATGTCCACCTTCAAGTCATCTCGCCCCGCCGTCC
TCGAACTCGCCGCACGATACAAGGAACTGGCCGAGGAAGCAAGCAAGGGC
ACGGAGGGCAAGACCCCGGAGCAGATCGAGCAAGCCGACCGCATCCTCTT
TTCCGAGATGTGCGAGATCTGCCTCTGGGGCAATGCCACTGACCTCTCCC
TCCTCACCTCCCTCACCTACGAAGACATCCAGAAGCTCCAGGGCTCGGAA
GCCCGCAAGGCCTCGGAGAAGAATATCCTCGTCAACGACCTCAACGCCTC
CTTCGACGTCCTGCACCAGGCCCGCCGTGACCGCAAGAATCAGGATCGCC
GCGTCGACATCGTCCTCGACAACTCCGGCTTCGAGCTCTTCGTCGACCTC
ATCCTCGCCGGCTACCTCCTCTCCGCCGGCCTCGCAACCACTGTCGTCCT
CCACCCCAAGAACATCCCCTGGTTCGTCTCCGACGTCACTCCCCCGGACT
TCGCCGCCCTCATCGCCGCCCTCTCCGACCCGCAGGCCTTCTACACTGCC
CCCGACGAGTCCGGCAAGAGCTTCGACCCCCTCTCGGAGAAGGAAGTCTC
CGAAGTCAAATTCCTCTTCGACCACTGGAGCCACCTCCACGCGGAAGGAA
AGCTGATCATCCGTCCTCACACCTTCTGGACTACCCCAGGAAGCTACTGG
CGCATGCCATATGTAGCCCCGGACCTCTTCAGCGACCTGAAGGACAGCGA
ATTGGTCTTGTTCAAGGGTGACTTGAACTACCGCAAGTTGACCAACGATG
TACGTCCCCTCCATCCATCACCACCCTTCTTAAGTTCTGATCTAATATTA
TGTACAGGCTGCCTGGGACCCCACAACCCCCTTCACAGAAGCCATCGGCC
CACTGGGCCCGCAATCCGGCGTCCGCGTCATGGCTTTCCGCACCTGCAAG
GCCGATGTGGTGGTTGGTCTGCCCAAGGGTGTGGATGAGGAGCTCCGCCA
GATGCCTAACGGTGGGGGCGACGAGGCGCGGAAGTGGGCGTGGAGTGGGA
AGTGGGCTGTTGTGTCGTTTTGTGATGGGAAGGCTTAG back to topCoding sequence (CDS) from alignment at An17:210262..211949- >CBS51388_010561-T1 ID=CBS51388_010561-T1|Name=CBS51388_010561-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7260bp|location=Sequence derived from alignment at An17:210262..211949- (Aspergillus niger CBS 513.88)
GCTGCCTGGGACCCCACAACCCCCTTCACAGAAGCCATCGGCCCACTGGG
CCCGCAATCCGGCGTCCGCGTCATGGCTTTCCGCACCTGCAAGGCCGATG
TGGTGGTTGGTCTGCCCAAGGGTGTGGATGAGGAGCTCCGCCAGATGCCT
AACGGTGGGGGCGACGAGGCGCGGAAGTGGGCGTGGAGTGGGAAGTGGGC
TGTTGTGTCGTTTTGTGATGGGAAGGCTTAGACAGACGCCTGAGCACCTT
CTTCTCCCTCTCCAAGCACTGGAAGGGCTATGACGTGTTCGCCCGCCAGA
AGATGTCCACCTTCAAGTCATCTCGCCCCGCCGTCCTCGAACTCGCCGCA
CGATACAAGGAACTGGCCGAGGAAGCAAGCAAGGGCACGGAGGGCAAGAC
CCCGGAGCAGATCGAGCAAGCCGACCGCATCCTCTTTTCCGAGATGTGCG
AGATCTGCCTCTGGGGCAATGCCACTGACCTCTCCCTCCTCACCTCCCTC
ACCTACGAAGACATCCAGAAGCTCCAGGGCTCGGAAGCCCGCAAGGCCTC
GGAGAAGAATATCCTCGTCAACGACCTCAACGCCTCCTTCGACGTCCTGC
ACCAGGCCCGCCGTGACCGCAAGAATCAGGATCGCCGCGTCGACATCGTC
CTCGACAACTCCGGCTTCGAGCTCTTCGTCGACCTCATCCTCGCCGGCTA
CCTCCTCTCCGCCGGCCTCGCAACCACTGTCGTCCTCCACCCCAAGAACA
TCCCCTGGTTCGTCTCCGACGTCACTCCCCCGGACTTCGCCGCCCTCATC
GCCGCCCTCTCCGACCCGCAGGCCTTCTACACTGCCCCCGACGAGTCCGG
CAAGAGCTTCGACCCCCTCTCGGAGAAGGAAGTCTCCGAAGTCAAATTCC
TCTTCGACCACTGGAGCCACCTCCACGCGGAAGGAAAGCTGATCATCCGT
CCTCACACCTTCTGGACTACCCCAGGAAGCTACTGGCGCATGCCATATGT
AGCCCCGGACCTCTTCAGCGACCTGAAGGACAGCGAATTGGTCTTGTTCA
AGGGTGACTTGAACTACCGCAAGTTGACCAACGATCCCTCTCCCCGACGA
CGGCCAGCCCGACATTGCGGCGTACAACCAGGAGCTGGAGCAGCGGGGAA
ACCCTTCATGGCACGACGTCGCATGGCTCTACTCAGAATGCTACCTCTAC
TGGCGCGATTGATGATCTGCACCGCAGCGTTGCCGATGTAACCGACGAGG
AGAAGCGTCAGGAAGGGAAAGCGATCATTGGGAGCCTCGCAGCTTTCAAA
TATGAGCTGCAGCACAACAGACAGTTGACATGACTGCCCCTCTTCCTGCA
GCCCAAACTAACCCCGCCTTCCCCTCCGCAGCGCAGTATCTCACCTCCGA
CAAGTCCAGCTTCGCCTCGGTCTCGGCCCACGAACGCTGGCCGGTCATCT
TGGCTGCCTGGGACCCCACAACCCCCTTCACAGAAGCCATCGGCCCACTG
GGCCCGCAATCCGGCGTCCGCGTCATGGCTTTCCGCACCTGCAAGGCCGA
TGTGGTGGTTGGTCTGCCCAAGGGTGTGGATGAGGAGCTCCGCCAGATGC
CTAACGGTGGGGGCGACGAGGCGCGGAAGTGGGCGTGGAGTGGGAAGTGG
GCTGTTGTGTCGTTTTGTGATGGGAAGGCTTAGACAGACGCCTGAGCACC
TTCTTCTCCCTCTCCAAGCACTGGAAGGGCTATGACGTGTTCGCCCGCCA
GAAGATGTCCACCTTCAAGTCATCTCGCCCCGCCGTCCTCGAACTCGCCG
CACGATACAAGGAACTGGCCGAGGAAGCAAGCAAGGGCACGGAGGGCAAG
ACCCCGGAGCAGATCGAGCAAGCCGACCGCATCCTCTTTTCCGAGATGTG
CGAGATCTGCCTCTGGGGCAATGCCACTGACCTCTCCCTCCTCACCTCCC
TCACCTACGAAGACATCCAGAAGCTCCAGGGCTCGGAAGCCCGCAAGGCC
TCGGAGAAGAATATCCTCGTCAACGACCTCAACGCCTCCTTCGACGTCCT
GCACCAGGCCCGCCGTGACCGCAAGAATCAGGATCGCCGCGTCGACATCG
TCCTCGACAACTCCGGCTTCGAGCTCTTCGTCGACCTCATCCTCGCCGGC
TACCTCCTCTCCGCCGGCCTCGCAACCACTGTCGTCCTCCACCCCAAGAA
CATCCCCTGGTTCGTCTCCGACGTCACTCCCCCGGACTTCGCCGCCCTCA
TCGCCGCCCTCTCCGACCCGCAGGCCTTCTACACTGCCCCCGACGAGTCC
GGCAAGAGCTTCGACCCCCTCTCGGAGAAGGAAGTCTCCGAAGTCAAATT
CCTCTTCGACCACTGGAGCCACCTCCACGCGGAAGGAAAGCTGATCATCC
GTCCTCACACCTTCTGGACTACCCCAGGAAGCTACTGGCGCATGCCATAT
GTAGCCCCGGACCTCTTCAGCGACCTGAAGGACAGCGAATTGGTCTTGTT
CAAGGGTGACTTGAACTACCGCAAGTTGACCAACGATCCCTCTCCCCGAC
GACGGCCAGCCCGACATTGCGGCGTACAACCAGGAGCTGGAGCAGCGGGG
AAACCCTTCATGGCACGACGTCGCATGGCTCTACTCAGAATGCTACCTCT
ACTGGCGCGATTGATGATCTGCACCGCAGCGTTGCCGATGTAACCGACGA
GGAGAAGCGTCAGGAAGGGAAAGCGATCATTGGGAGCCTCGCAGCTTTCA
AATATGAGCTGCAGCACAACAGACAGTTGACATGACTGCCCCTCTTCCTG
CAGCCCAAACTAACCCCGCCTTCCCCTCCGCAGCGCAGTATCTCACCTCC
GACAAGTCCAGCTTCGCCTCGGTCTCGGCCCACGAACGCTGGCCGGTCAT
CTTGGCTGCCTGGGACCCCACAACCCCCTTCACAGAAGCCATCGGCCCAC
TGGGCCCGCAATCCGGCGTCCGCGTCATGGCTTTCCGCACCTGCAAGGCC
GATGTGGTGGTTGGTCTGCCCAAGGGTGTGGATGAGGAGCTCCGCCAGAT
GCCTAACGGTGGGGGCGACGAGGCGCGGAAGTGGGCGTGGAGTGGGAAGT
GGGCTGTTGTGTCGTTTTGTGATGGGAAGGCTTAGACAGACGCCTGAGCA
CCTTCTTCTCCCTCTCCAAGCACTGGAAGGGCTATGACGTGTTCGCCCGC
CAGAAGATGTCCACCTTCAAGTCATCTCGCCCCGCCGTCCTCGAACTCGC
CGCACGATACAAGGAACTGGCCGAGGAAGCAAGCAAGGGCACGGAGGGCA
AGACCCCGGAGCAGATCGAGCAAGCCGACCGCATCCTCTTTTCCGAGATG
TGCGAGATCTGCCTCTGGGGCAATGCCACTGACCTCTCCCTCCTCACCTC
CCTCACCTACGAAGACATCCAGAAGCTCCAGGGCTCGGAAGCCCGCAAGG
CCTCGGAGAAGAATATCCTCGTCAACGACCTCAACGCCTCCTTCGACGTC
CTGCACCAGGCCCGCCGTGACCGCAAGAATCAGGATCGCCGCGTCGACAT
CGTCCTCGACAACTCCGGCTTCGAGCTCTTCGTCGACCTCATCCTCGCCG
GCTACCTCCTCTCCGCCGGCCTCGCAACCACTGTCGTCCTCCACCCCAAG
AACATCCCCTGGTTCGTCTCCGACGTCACTCCCCCGGACTTCGCCGCCCT
CATCGCCGCCCTCTCCGACCCGCAGGCCTTCTACACTGCCCCCGACGAGT
CCGGCAAGAGCTTCGACCCCCTCTCGGAGAAGGAAGTCTCCGAAGTCAAA
TTCCTCTTCGACCACTGGAGCCACCTCCACGCGGAAGGAAAGCTGATCAT
CCGTCCTCACACCTTCTGGACTACCCCAGGAAGCTACTGGCGCATGCCAT
ATGTAGCCCCGGACCTCTTCAGCGACCTGAAGGACAGCGAATTGGTCTTG
TTCAAGGGTGACTTGAACTACCGCAAGTTGACCAACGATCCCTCTCCCCG
ACGACGGCCAGCCCGACATTGCGGCGTACAACCAGGAGCTGGAGCAGCGG
GGAAACCCTTCATGGCACGACGTCGCATGGCTCTACTCAGAATGCTACCT
CTACTGGCGCGATTGATGATCTGCACCGCAGCGTTGCCGATGTAACCGAC
GAGGAGAAGCGTCAGGAAGGGAAAGCGATCATTGGGAGCCTCGCAGCTTT
CAAATATGAGCTGCAGCACAACAGACAGTTGACATGACTGCCCCTCTTCC
TGCAGCCCAAACTAACCCCGCCTTCCCCTCCGCAGCGCAGTATCTCACCT
CCGACAAGTCCAGCTTCGCCTCGGTCTCGGCCCACGAACGCTGGCCGGTC
ATCTTGGCTGCCTGGGACCCCACAACCCCCTTCACAGAAGCCATCGGCCC
ACTGGGCCCGCAATCCGGCGTCCGCGTCATGGCTTTCCGCACCTGCAAGG
CCGATGTGGTGGTTGGTCTGCCCAAGGGTGTGGATGAGGAGCTCCGCCAG
ATGCCTAACGGTGGGGGCGACGAGGCGCGGAAGTGGGCGTGGAGTGGGAA
GTGGGCTGTTGTGTCGTTTTGTGATGGGAAGGCTTAGACAGACGCCTGAG
CACCTTCTTCTCCCTCTCCAAGCACTGGAAGGGCTATGACGTGTTCGCCC
GCCAGAAGATGTCCACCTTCAAGTCATCTCGCCCCGCCGTCCTCGAACTC
GCCGCACGATACAAGGAACTGGCCGAGGAAGCAAGCAAGGGCACGGAGGG
CAAGACCCCGGAGCAGATCGAGCAAGCCGACCGCATCCTCTTTTCCGAGA
TGTGCGAGATCTGCCTCTGGGGCAATGCCACTGACCTCTCCCTCCTCACC
TCCCTCACCTACGAAGACATCCAGAAGCTCCAGGGCTCGGAAGCCCGCAA
GGCCTCGGAGAAGAATATCCTCGTCAACGACCTCAACGCCTCCTTCGACG
TCCTGCACCAGGCCCGCCGTGACCGCAAGAATCAGGATCGCCGCGTCGAC
ATCGTCCTCGACAACTCCGGCTTCGAGCTCTTCGTCGACCTCATCCTCGC
CGGCTACCTCCTCTCCGCCGGCCTCGCAACCACTGTCGTCCTCCACCCCA
AGAACATCCCCTGGTTCGTCTCCGACGTCACTCCCCCGGACTTCGCCGCC
CTCATCGCCGCCCTCTCCGACCCGCAGGCCTTCTACACTGCCCCCGACGA
GTCCGGCAAGAGCTTCGACCCCCTCTCGGAGAAGGAAGTCTCCGAAGTCA
AATTCCTCTTCGACCACTGGAGCCACCTCCACGCGGAAGGAAAGCTGATC
ATCCGTCCTCACACCTTCTGGACTACCCCAGGAAGCTACTGGCGCATGCC
ATATGTAGCCCCGGACCTCTTCAGCGACCTGAAGGACAGCGAATTGGTCT
TGTTCAAGGGTGACTTGAACTACCGCAAGTTGACCAACGATCCCTCTCCC
CGACGACGGCCAGCCCGACATTGCGGCGTACAACCAGGAGCTGGAGCAGC
GGGGAAACCCTTCATGGCACGACGTCGCATGGCTCTACTCAGAATGCTAC
CTCTACTGGCGCGATTGATGATCTGCACCGCAGCGTTGCCGATGTAACCG
ACGAGGAGAAGCGTCAGGAAGGGAAAGCGATCATTGGGAGCCTCGCAGCT
TTCAAATATGAGCTGCAGCACAACAGACAGTTGACATGACTGCCCCTCTT
CCTGCAGCCCAAACTAACCCCGCCTTCCCCTCCGCAGCGCAGTATCTCAC
CTCCGACAAGTCCAGCTTCGCCTCGGTCTCGGCCCACGAACGCTGGCCGG
TCATCTTGGCTGCCTGGGACCCCACAACCCCCTTCACAGAAGCCATCGGC
CCACTGGGCCCGCAATCCGGCGTCCGCGTCATGGCTTTCCGCACCTGCAA
GGCCGATGTGGTGGTTGGTCTGCCCAAGGGTGTGGATGAGGAGCTCCGCC
AGATGCCTAACGGTGGGGGCGACGAGGCGCGGAAGTGGGCGTGGAGTGGG
AAGTGGGCTGTTGTGTCGTTTTGTGATGGGAAGGCTTAGACAGACGCCTG
AGCACCTTCTTCTCCCTCTCCAAGCACTGGAAGGGCTATGACGTGTTCGC
CCGCCAGAAGATGTCCACCTTCAAGTCATCTCGCCCCGCCGTCCTCGAAC
TCGCCGCACGATACAAGGAACTGGCCGAGGAAGCAAGCAAGGGCACGGAG
GGCAAGACCCCGGAGCAGATCGAGCAAGCCGACCGCATCCTCTTTTCCGA
GATGTGCGAGATCTGCCTCTGGGGCAATGCCACTGACCTCTCCCTCCTCA
CCTCCCTCACCTACGAAGACATCCAGAAGCTCCAGGGCTCGGAAGCCCGC
AAGGCCTCGGAGAAGAATATCCTCGTCAACGACCTCAACGCCTCCTTCGA
CGTCCTGCACCAGGCCCGCCGTGACCGCAAGAATCAGGATCGCCGCGTCG
ACATCGTCCTCGACAACTCCGGCTTCGAGCTCTTCGTCGACCTCATCCTC
GCCGGCTACCTCCTCTCCGCCGGCCTCGCAACCACTGTCGTCCTCCACCC
CAAGAACATCCCCTGGTTCGTCTCCGACGTCACTCCCCCGGACTTCGCCG
CCCTCATCGCCGCCCTCTCCGACCCGCAGGCCTTCTACACTGCCCCCGAC
GAGTCCGGCAAGAGCTTCGACCCCCTCTCGGAGAAGGAAGTCTCCGAAGT
CAAATTCCTCTTCGACCACTGGAGCCACCTCCACGCGGAAGGAAAGCTGA
TCATCCGTCCTCACACCTTCTGGACTACCCCAGGAAGCTACTGGCGCATG
CCATATGTAGCCCCGGACCTCTTCAGCGACCTGAAGGACAGCGAATTGGT
CTTGTTCAAGGGTGACTTGAACTACCGCAAGTTGACCAACGATCCCTCTC
CCCGACGACGGCCAGCCCGACATTGCGGCGTACAACCAGGAGCTGGAGCA
GCGGGGAAACCCTTCATGGCACGACGTCGCATGGCTCTACTCAGAATGCT
ACCTCTACTGGCGCGATTGATGATCTGCACCGCAGCGTTGCCGATGTAAC
CGACGAGGAGAAGCGTCAGGAAGGGAAAGCGATCATTGGGAGCCTCGCAG
CTTTCAAATATGAGCTGCAGCACAACAGACAGTTGACATGACTGCCCCTC
TTCCTGCAGCCCAAACTAACCCCGCCTTCCCCTCCGCAGCGCAGTATCTC
ACCTCCGACAAGTCCAGCTTCGCCTCGGTCTCGGCCCACGAACGCTGGCC
GGTCATCTTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036075 |
| DBxref | InterPro:IPR002791 |
| DBxref | PFAM:PF01937 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An17 | supercontig | An17:210262..211949 - |
|
