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Sequences
The following sequences are available for this feature:
mRNA from alignment at An17:212613..214242- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010562-T1 ID=CBS51388_010562-T1|Name=CBS51388_010562-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1630bp|location=Sequence derived from alignment at An17:212613..214242- (Aspergillus niger CBS 513.88)
ATGGCTTCCCCCGATCTCGAGGCCGCCACTGCCCTCAAGGTGCAGGGGAA
CAAGGCCTTCGCGGAACATGAGTGGCCTACTGCCATAGATTTTTACTCGA
GAGCCATTGAGAAGTATGATAAGGAGCCGTCGTTCTTTAGTAACCGCGCT
CAGGTAGGTGGCGCTACTGCTGAAACTGGTGGAGGTGTTGAAGATACTGA
CTGTTTCTGGGGTTCCTGGTTAGGCACATATCAAACTTGAGGCTTACGGT
TTTGCGATCGCTGATGCCTCCAAGGCACTGGAGCTTGACTCCAACTATGT
CAAGGTTCGTTGGGATGCTGCTGGTTGTTGCTACTGTTGTTCGCCTTTGA
CTTACCCAACCCCGTTGCTAGGCCTATTGGCGCCGCGCCCTTGCGAACTC
CGCTATTCTGAACTACAAGGAAGCCCTGAAAGACTTCAAGGCCGTGATCA
AGAGAGAGCCCAACAACCGTGATGCCAAGCTAAAGCTCACCGAGTGCGAG
AAGCTCGTTCGTCGGCTCGAGTTCGAGAAGGCGATCGAGGTCGGTGACCC
GCCCTCTGCTTTCGAGGACCTGGATATCGATGCGATGGTTGTGGATGACA
AGTATGATGGTGTGCGCTTGGAGAAGGAAATGACGCAGGAGTTCATTGAT
GATATGATTGAGCGGTTCAAGAACGGGAAGAAGATCCATCGCAAATATGC
TTTCCAAATAATTAAGGCCGTCAAGGATCTTGTCTATGCGGAACCGACGA
TGGTGGAGGTTGGTGTTAAGGAGGGTACTAGGTTGACGGTTTGCGGTGAC
ACTCATGGTCAATTCTTCGATCTCCTCGAGATCTTCCGCCTGAACGGGTA
CCCTAGCGATACCCATGCTTATCTCTTCAACGGTGACTTCGTGGACCGTG
GATCGTGGTCGACGGAGATTGCTCTTCTGCTCTACGCCTACAAGTGGCTG
CGGCCCAACGGAATCTTCCTGAACCGTGGGAACCACGAGACGGACGACAT
GAACAAGGTGTATGGCTTTGAGGGCGAGTGCAAGGCCAAGTACAATGAGA
CGGTGTTCAAGGTCTTCTCCGAGTCCTTCTCGGCTCTGCCGCTGGCTACG
TTGATCGGCAACAAGTACCTCGTGCTCCACGGCGGTCTCTTCTCGGATGA
CAACACTACTCTGGATGATATCCGCAAGCTGAACCGTCACAACCAGCGCC
AGCCCGGACAACAGGGCTTGATGATGGAAATGCTGTGGACAGACCCGCAG
ACCGCGCCCGGTCGCGGACCCAGCAAGCGTGGTGTTGGTCTTCAGTTTGG
TCCGGACGTCACCAAGCGCTTCTGTGAGAAGAATGGTCTGGAGGCAATCA
TTCGTTCGCACGAGGTGCGCATGGAGGGCTACGAGGTCGAGCACGACGGA
CGGTGTATCACCGTCTTCTCTGCTCCGAAGTACTGCGACACCACGGAGAA
CAAGGGAGCCTTTATCAAGATCGGGCCCGAGCTCAAGCTTGAGTACCAGG
TGTTTGAGGCTGTTCCTCACCCGGATATTAAGCCGATGGTAAGTTTATCT
TAATGAGAAGTCCGGACTGGCATGCTAATGACAACTTCCAGGCGTATGCG
CAAAACTCTCTCATGTCCTCGATGATGTGA back to topCoding sequence (CDS) from alignment at An17:212613..214242- >CBS51388_010562-T1 ID=CBS51388_010562-T1|Name=CBS51388_010562-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5760bp|location=Sequence derived from alignment at An17:212613..214242- (Aspergillus niger CBS 513.88)
GCGTATGCGCAAAACTCTCTCATGTCCTCGATGATGTGAGCCTATTGGCG
CCGCGCCCTTGCGAACTCCGCTATTCTGAACTACAAGGAAGCCCTGAAAG
ACTTCAAGGCCGTGATCAAGAGAGAGCCCAACAACCGTGATGCCAAGCTA
AAGCTCACCGAGTGCGAGAAGCTCGTTCGTCGGCTCGAGTTCGAGAAGGC
GATCGAGGTCGGTGACCCGCCCTCTGCTTTCGAGGACCTGGATATCGATG
CGATGGTTGTGGATGACAAGTATGATGGTGTGCGCTTGGAGAAGGAAATG
ACGCAGGAGTTCATTGATGATATGATTGAGCGGTTCAAGAACGGGAAGAA
GATCCATCGCAAATATGCTTTCCAAATAATTAAGGCCGTCAAGGATCTTG
TCTATGCGGAACCGACGATGGTGGAGGTTGGTGTTAAGGAGGGTACTAGG
TTGACGGTTTGCGGTGACACTCATGGTCAATTCTTCGATCTCCTCGAGAT
CTTCCGCCTGAACGGGTACCCTAGCGATACCCATGCTTATCTCTTCAACG
GTGACTTCGTGGACCGTGGATCGTGGTCGACGGAGATTGCTCTTCTGCTC
TACGCCTACAAGTGGCTGCGGCCCAACGGAATCTTCCTGAACCGTGGGAA
CCACGAGACGGACGACATGAACAAGGTGTATGGCTTTGAGGGCGAGTGCA
AGGCCAAGTACAATGAGACGGTGTTCAAGGTCTTCTCCGAGTCCTTCTCG
GCTCTGCCGCTGGCTACGTTGATCGGCAACAAGTACCTCGTGCTCCACGG
CGGTCTCTTCTCGGATGACAACACTACTCTGGATGATATCCGCAAGCTGA
ACCGTCACAACCAGCGCCAGCCCGGACAACAGGGCTTGATGATGGAAATG
CTGTGGACAGACCCGCAGACCGCGCCCGGTCGCGGACCCAGCAAGCGTGG
TGTTGGTCTTCAGTTTGGTCCGGACGTCACCAAGCGCTTCTGTGAGAAGA
ATGGTCTGGAGGCAATCATTCGTTCGCACGAGGTGCGCATGGAGGGCTAC
GAGGTCGAGCACGACGGACGGTGTATCACCGTCTTCTCTGCTCCGAAGTA
CTGCGACACCACGGAGAACAAGGGAGCCTTTATCAAGATCGGGCCCGAGC
TCAAGCTTGAGTACCAGGTGTTTGAGGCTGTTCCTCACCCGGATATTAAG
CCGATGGCACATATCAAACTTGAGGCTTACGGTTTTGCGATCGCTGATGC
CTCCAAGGCACTGGAGCTTGACTCCAACTATGTCAAGATGGCTTCCCCCG
ATCTCGAGGCCGCCACTGCCCTCAAGGTGCAGGGGAACAAGGCCTTCGCG
GAACATGAGTGGCCTACTGCCATAGATTTTTACTCGAGAGCCATTGAGAA
GTATGATAAGGAGCCGTCGTTCTTTAGTAACCGCGCTCAGGCGTATGCGC
AAAACTCTCTCATGTCCTCGATGATGTGAGCCTATTGGCGCCGCGCCCTT
GCGAACTCCGCTATTCTGAACTACAAGGAAGCCCTGAAAGACTTCAAGGC
CGTGATCAAGAGAGAGCCCAACAACCGTGATGCCAAGCTAAAGCTCACCG
AGTGCGAGAAGCTCGTTCGTCGGCTCGAGTTCGAGAAGGCGATCGAGGTC
GGTGACCCGCCCTCTGCTTTCGAGGACCTGGATATCGATGCGATGGTTGT
GGATGACAAGTATGATGGTGTGCGCTTGGAGAAGGAAATGACGCAGGAGT
TCATTGATGATATGATTGAGCGGTTCAAGAACGGGAAGAAGATCCATCGC
AAATATGCTTTCCAAATAATTAAGGCCGTCAAGGATCTTGTCTATGCGGA
ACCGACGATGGTGGAGGTTGGTGTTAAGGAGGGTACTAGGTTGACGGTTT
GCGGTGACACTCATGGTCAATTCTTCGATCTCCTCGAGATCTTCCGCCTG
AACGGGTACCCTAGCGATACCCATGCTTATCTCTTCAACGGTGACTTCGT
GGACCGTGGATCGTGGTCGACGGAGATTGCTCTTCTGCTCTACGCCTACA
AGTGGCTGCGGCCCAACGGAATCTTCCTGAACCGTGGGAACCACGAGACG
GACGACATGAACAAGGTGTATGGCTTTGAGGGCGAGTGCAAGGCCAAGTA
CAATGAGACGGTGTTCAAGGTCTTCTCCGAGTCCTTCTCGGCTCTGCCGC
TGGCTACGTTGATCGGCAACAAGTACCTCGTGCTCCACGGCGGTCTCTTC
TCGGATGACAACACTACTCTGGATGATATCCGCAAGCTGAACCGTCACAA
CCAGCGCCAGCCCGGACAACAGGGCTTGATGATGGAAATGCTGTGGACAG
ACCCGCAGACCGCGCCCGGTCGCGGACCCAGCAAGCGTGGTGTTGGTCTT
CAGTTTGGTCCGGACGTCACCAAGCGCTTCTGTGAGAAGAATGGTCTGGA
GGCAATCATTCGTTCGCACGAGGTGCGCATGGAGGGCTACGAGGTCGAGC
ACGACGGACGGTGTATCACCGTCTTCTCTGCTCCGAAGTACTGCGACACC
ACGGAGAACAAGGGAGCCTTTATCAAGATCGGGCCCGAGCTCAAGCTTGA
GTACCAGGTGTTTGAGGCTGTTCCTCACCCGGATATTAAGCCGATGGCAC
ATATCAAACTTGAGGCTTACGGTTTTGCGATCGCTGATGCCTCCAAGGCA
CTGGAGCTTGACTCCAACTATGTCAAGATGGCTTCCCCCGATCTCGAGGC
CGCCACTGCCCTCAAGGTGCAGGGGAACAAGGCCTTCGCGGAACATGAGT
GGCCTACTGCCATAGATTTTTACTCGAGAGCCATTGAGAAGTATGATAAG
GAGCCGTCGTTCTTTAGTAACCGCGCTCAGGCGTATGCGCAAAACTCTCT
CATGTCCTCGATGATGTGAGCCTATTGGCGCCGCGCCCTTGCGAACTCCG
CTATTCTGAACTACAAGGAAGCCCTGAAAGACTTCAAGGCCGTGATCAAG
AGAGAGCCCAACAACCGTGATGCCAAGCTAAAGCTCACCGAGTGCGAGAA
GCTCGTTCGTCGGCTCGAGTTCGAGAAGGCGATCGAGGTCGGTGACCCGC
CCTCTGCTTTCGAGGACCTGGATATCGATGCGATGGTTGTGGATGACAAG
TATGATGGTGTGCGCTTGGAGAAGGAAATGACGCAGGAGTTCATTGATGA
TATGATTGAGCGGTTCAAGAACGGGAAGAAGATCCATCGCAAATATGCTT
TCCAAATAATTAAGGCCGTCAAGGATCTTGTCTATGCGGAACCGACGATG
GTGGAGGTTGGTGTTAAGGAGGGTACTAGGTTGACGGTTTGCGGTGACAC
TCATGGTCAATTCTTCGATCTCCTCGAGATCTTCCGCCTGAACGGGTACC
CTAGCGATACCCATGCTTATCTCTTCAACGGTGACTTCGTGGACCGTGGA
TCGTGGTCGACGGAGATTGCTCTTCTGCTCTACGCCTACAAGTGGCTGCG
GCCCAACGGAATCTTCCTGAACCGTGGGAACCACGAGACGGACGACATGA
ACAAGGTGTATGGCTTTGAGGGCGAGTGCAAGGCCAAGTACAATGAGACG
GTGTTCAAGGTCTTCTCCGAGTCCTTCTCGGCTCTGCCGCTGGCTACGTT
GATCGGCAACAAGTACCTCGTGCTCCACGGCGGTCTCTTCTCGGATGACA
ACACTACTCTGGATGATATCCGCAAGCTGAACCGTCACAACCAGCGCCAG
CCCGGACAACAGGGCTTGATGATGGAAATGCTGTGGACAGACCCGCAGAC
CGCGCCCGGTCGCGGACCCAGCAAGCGTGGTGTTGGTCTTCAGTTTGGTC
CGGACGTCACCAAGCGCTTCTGTGAGAAGAATGGTCTGGAGGCAATCATT
CGTTCGCACGAGGTGCGCATGGAGGGCTACGAGGTCGAGCACGACGGACG
GTGTATCACCGTCTTCTCTGCTCCGAAGTACTGCGACACCACGGAGAACA
AGGGAGCCTTTATCAAGATCGGGCCCGAGCTCAAGCTTGAGTACCAGGTG
TTTGAGGCTGTTCCTCACCCGGATATTAAGCCGATGGCACATATCAAACT
TGAGGCTTACGGTTTTGCGATCGCTGATGCCTCCAAGGCACTGGAGCTTG
ACTCCAACTATGTCAAGATGGCTTCCCCCGATCTCGAGGCCGCCACTGCC
CTCAAGGTGCAGGGGAACAAGGCCTTCGCGGAACATGAGTGGCCTACTGC
CATAGATTTTTACTCGAGAGCCATTGAGAAGTATGATAAGGAGCCGTCGT
TCTTTAGTAACCGCGCTCAGGCGTATGCGCAAAACTCTCTCATGTCCTCG
ATGATGTGAGCCTATTGGCGCCGCGCCCTTGCGAACTCCGCTATTCTGAA
CTACAAGGAAGCCCTGAAAGACTTCAAGGCCGTGATCAAGAGAGAGCCCA
ACAACCGTGATGCCAAGCTAAAGCTCACCGAGTGCGAGAAGCTCGTTCGT
CGGCTCGAGTTCGAGAAGGCGATCGAGGTCGGTGACCCGCCCTCTGCTTT
CGAGGACCTGGATATCGATGCGATGGTTGTGGATGACAAGTATGATGGTG
TGCGCTTGGAGAAGGAAATGACGCAGGAGTTCATTGATGATATGATTGAG
CGGTTCAAGAACGGGAAGAAGATCCATCGCAAATATGCTTTCCAAATAAT
TAAGGCCGTCAAGGATCTTGTCTATGCGGAACCGACGATGGTGGAGGTTG
GTGTTAAGGAGGGTACTAGGTTGACGGTTTGCGGTGACACTCATGGTCAA
TTCTTCGATCTCCTCGAGATCTTCCGCCTGAACGGGTACCCTAGCGATAC
CCATGCTTATCTCTTCAACGGTGACTTCGTGGACCGTGGATCGTGGTCGA
CGGAGATTGCTCTTCTGCTCTACGCCTACAAGTGGCTGCGGCCCAACGGA
ATCTTCCTGAACCGTGGGAACCACGAGACGGACGACATGAACAAGGTGTA
TGGCTTTGAGGGCGAGTGCAAGGCCAAGTACAATGAGACGGTGTTCAAGG
TCTTCTCCGAGTCCTTCTCGGCTCTGCCGCTGGCTACGTTGATCGGCAAC
AAGTACCTCGTGCTCCACGGCGGTCTCTTCTCGGATGACAACACTACTCT
GGATGATATCCGCAAGCTGAACCGTCACAACCAGCGCCAGCCCGGACAAC
AGGGCTTGATGATGGAAATGCTGTGGACAGACCCGCAGACCGCGCCCGGT
CGCGGACCCAGCAAGCGTGGTGTTGGTCTTCAGTTTGGTCCGGACGTCAC
CAAGCGCTTCTGTGAGAAGAATGGTCTGGAGGCAATCATTCGTTCGCACG
AGGTGCGCATGGAGGGCTACGAGGTCGAGCACGACGGACGGTGTATCACC
GTCTTCTCTGCTCCGAAGTACTGCGACACCACGGAGAACAAGGGAGCCTT
TATCAAGATCGGGCCCGAGCTCAAGCTTGAGTACCAGGTGTTTGAGGCTG
TTCCTCACCCGGATATTAAGCCGATGGCACATATCAAACTTGAGGCTTAC
GGTTTTGCGATCGCTGATGCCTCCAAGGCACTGGAGCTTGACTCCAACTA
TGTCAAGATGGCTTCCCCCGATCTCGAGGCCGCCACTGCCCTCAAGGTGC
AGGGGAACAAGGCCTTCGCGGAACATGAGTGGCCTACTGCCATAGATTTT
TACTCGAGAGCCATTGAGAAGTATGATAAGGAGCCGTCGTTCTTTAGTAA
CCGCGCTCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
| GO:0016787 | hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261M78 |
| DBxref | InterPro:IPR041753 |
| DBxref | InterPro:IPR013026 |
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR013235 |
| DBxref | InterPro:IPR004843 |
| DBxref | InterPro:IPR029052 |
| DBxref | InterPro:IPR019734 |
| DBxref | InterPro:IPR006186 |
| DBxref | PFAM:PF08321 |
| DBxref | PFAM:PF00149 |
| Product | Palmitoyl-protein thioesterase 1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An17 | supercontig | An17:212613..214242 - |
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